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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01248 alignment
(49 sequences with 109 aa)


RP38_HUMAN/99-190 QQVSGWTP-AHVRKQ.LVIGVNEVTRALERR..ELLLVLVCKSVKPAMITS.-..--HLIQLSL--SRSVPA..CQVP---RLSERIAPVIGLKCVLALAFKKNTTDFV
Q9XXD4_CAEEL/53-148 KKVYKLIKKASAGDKtLREGIKDVQKELRRN..EKGICILAGNVSPIDVYS.-..--HIPGICE--EKEIPY..VYIPSREQLGLAVGHRRP-SILIFVKPSGDFKELY
Q9V3U2_DROME/51-146 KKCYKLVKKAMKHKTfLRNGLKDVQTRLRKG..ETGICIFAGDVTPVDIMC.-..--HLPAVCE--EKGIPY..TYTPSRADLGAAMGVKRG-TVALLVRQNEEYKDLY
NHP2_SCHPO/39-133 KKMMKTVKKASKQKH.ILRGVKEVVKAVRKG..EKGLVILAGDISPMDVIS.-..--HIPVLCE--DNNVPY..LYTVSKELLGEASNTKRP-TSCVMIVPGGKKKDMS
NHPX_DROME/19-113 AKIMNLLQQALNYNQ.LRKGANEATKTLNRG..LADIVVLAGDAEPIEILL.-..--HLPLLCE--DKNVPY..VFVRSKQALGRACGVSRP-IVACSVTTNEGSQLKS
NHPX_YEAST/18-112 QQILDVVQQAANLRQ.LKKGANEATKTLNRG..ISEFIIMAADCEPIEILL.-..--HLPLLCE--DKNVPY..VFVPSRVALGRACGVSRP-VIAASITTNDASAIKT
Q9SU26_ARATH/20-114 ITILDLVQQATNYKQ.LKKGANEATKTLNRG..ISEFIVMAADTEPLEILL.-..--HLPLLAE--DKNVPY..VFVPSKQALGRACDVTRP-VIACSVTSNEASQLKS
RL7A_AERPE/17-111 EKAYEAVKRARETGR.IKKGTNETTKAVERG..LAKLVVIAEDVDPPEIVM.-..--HLPLLCD--EKKIPY..VYVPSKKRLGEAAGIEVA-AASVAIIEPGDAETLV
RL7A_METJA/15-106 KELLDAVAKAQ---K.IKKGANEVTKAVERG..IAKLVIIAEDVKPEEVVA.-..--HLPYLCE--EKGIPY..AYVASKQDLGKAAGLEVA-ASSVAIINEGDAEELK
RL7A_ARCFU/13-107 NEALSLLEKVRESGK.VKKGTNETTKAVERG..LAKLVYIAEDVDPPEIVA.-..--HLPLLCE--EKNVPY..IYVKSKNDLGRAVGIEVP-CASAAIINEGELRKEL
RL7A_HALMA/14-104 DDALEALEVARDTGA.VKKGTNETTKSIERG..SAELVFVAEDVQPEEIVM.-..--HIPELAD--EKGVPF..IFVEQQDDLGHAAGLEVG-SAAAAVTDAGEA----
RL7A_ARATH/112-207 AEAEGKPSESKKPIV.VKYGLNHVTYLIEQN..KAQLVVIAHDVDPIELVV.-..--WLPALCR--KMEVPY..CIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFS
RL8_SCHPO/116-211 ANGKSAQDVSKKPYN.VKYGLNHVVALIEAK..KAKLVLIASDVDPIELVV.-..--FLPALCK--KMGVPY..AIVKNKARLGTVIHQKTAAVLAVTEVREEDKNELA
RL8B_YEAST/116-211 AEGKSKQDASPKPYA.VKYGLNHVVSLIENK..KAKLVLIANDVDPIELVV.-..--FLPALCK--KMGVPY..AIIKGKARLGTLVNQKTSAVAALTEVRAEDEAALA
Q9W3Z2_DROME/127-221 AKGKDVEP-KKKPSY.VSAGTNTVTKLIEQK..KAQLVVIAHDVDPLELVL.-..--FLPALCR--KMGVPY..CIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFG
RL7A_ANOGA/128-222 AAGKEEPP-SKRANQ.LRQGINSVVKMVEQK..KAQLVIIAHDVDPIELVV.-..--YLPALCR--KMGVPY..CIIKGKARLGTLVYRKTCTCVALTQFENADKPNLA
RL7A_CHICK/121-215 AAGKGDTP-TKRPPV.LRAGVNTVTTLVENK..KAQLVVIAHDVDPIELVV.-..--FLPALCR--KMGVPY..CIIKSKARLGRLVHRKTCTCVAFTQVNPEDKGALA
GA45A_HUMAN/21-123 DALEEVLSKALSQRT.ITVGVYEAAKLLNVDpdNVVLCLLAADEDDDRDVAlQihFTLIQAFCC--ENDINI..LRVSNPGRLAELLLLETD-AGPAASEGAEQPPDLH
GA45B_HUMAN/21-121 AAVEELLVAAQRQDR.LTVGVYESAKLMNVDpdSVVLCLLAIDEEEEDDIAlQihFTLIQSFCC--DNDINI..VRVSGMQRLAQLLGEP---AETQGTTEARDLHCLL
RS12_TRYBB/30-125 DALRIVLMKARETNG.LICGLSEVTRALDRR..TAHLCVLADDCEDEEYKK.-..--LVTALAK--QNNIDL..VSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAV
O76223_9TRYP/29-124 DAIRIVIRKALEVNG.LVRGLSEVARALDRR..TAHMCILATDCDDEEYKK.-..--LIKALAL--QASIDI..IEVDSREELAEVGRGLQRRKQDETVKTFKCSCVAI
RS12_PLAFA/23-119 TAIQKVIKNAHVHDG.LKIGIREVIKSIESQ..EAKVCFLSDVCSEPAYKK.-..--LITTLCA--EKNIPLfmVQNDS-KDLGHWAGLFKLDNEGNARKIIGASSVAV
RS12_HORVU/28-123 TALQLVMKKSSAHDG.LVKGLREAAKSIEKH..AAQLCVLAEDCDQPDYVK.-..--LVKALCA--EHNVHL..VTVPSAKTLGEWAGLCKIDTEGKARKVVGCSCIVV
RS12C_ARATH/29-124 TALELTVRKSRAYGG.VVRGLHESAKLIEKR..NAQLCVLAEDCNQPDYVK.-..--LVKALCA--DHSIKL..LTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVI
RS12_YEAST/26-123 DALKVVLRTALVHDG.LARGLRESTKALTRG..EALLVVLVSSVTEANIIK.-..--LVEGLANDPENKVPL..IKVADAKQLGEWAGLGKIDREGNARKVVGASVVVV
RS12_ERYGR/16-111 DALKGALRTALMHDG.LARGLREASKALDRR..EAHMCVLNEACEEEAYKK.-..--LIVALCS--EHKIPL..IKVPDGKQLGEWAGLCVLDREGNARKVVNCSCVVV
RS12A_SCHPO/31-126 DALKEVLKRALVHDG.LARGIREASKALDRR..QAHLCVLCESCDQEAYVK.-..--LVEALCA--ESETPL..IKVADPKVLGEWAGLCVLDRDGNARKVVGCSCVAV
RS12_CAEEL/24-119 GALRAVLRAAHHADG.LAKGLHETCKALDKR..EAHFCVLAENCDEPQYVK.-..--LVETLCA--EHQIPL..IKVADKKIIGEYCGLCKYDKEGKARKVVGCSSAVV
RS12_DROME/23-118 TALQEVLKKSLIADG.LVHGIHQACKALDKR..QAVLCILAESFDEPNYKK.-..--LVTALCN--EHQIPL..IRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVI
RS12_HUMAN/15-110 TALQEVLKTALIHDG.LARGIREAAKALDKR..QAHLCVQASNCDEPMYVK.-..--LVEALLA--EHQINL..IKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVV
RS12_CYAPA/21-116 TALKEVLKKAMVVDG.LKRGLHECAKALDQR..SAQLCVLAANVNEPAYTR.-..--LVEALCA--EHGINL..IKVPENKQLGEWVGLCKIDKEGKARKVVGCSCAVI
Q9WZN2_THEMA/7-99 RKVYSYIGFAVRARK.IVFGKERIRAYIRSP.rEKKLIIIAEDTSERMKRD.-..---TIMRCE--NKKVPY..VIMFSKEELGRLLDKP---AVSVIGLEEDNLIDAI
YLXQ_BACSU/4-96 MEWFPLLGLANRARK.VVSGEDLVIKEIRNA..RAKLVLLTEDASSNTAKK.-..---VTDKCN--YYKVPY..KKVESRAVLGRSIGKEA--RVVVAVTDQGFANKLI
Q9XG43_GUITH/11-105 ELLSSKLKIIIKTGK.FSYGYKATLKNLRSG..KCKMIIITDNCIPLRKLE.-..---LEYYAMLNKCHVHH..FYGNN-VDLGLSCGKSYG-CSCLGITESGEVNFNE
RL30_TRYBB/10-104 DTINTKIQLVMKSGK.YVLGTQQSLKTLRQG..RSKLVVISANCPPIRKAE.-..---IEYYCTLSKTPIHH..YSGNN-LDLGTACGRHFR-ACVLSITDVGDSDITS
RL30B_SCHPO/22-116 DTINSKLALTMKSGK.YVLGYKSTLKTLRSG..KAKLILIAANAPPLRKSE.-..---LEYYAMLSRCSVHH..YSGNN-IDLGTACGKLFR-VGVLAVIDAGDSDILA
RL30_KLULA/7-101 ENINQKLALVVKSGK.YSLGYKSTVKSLRQG..KAKLIIIAANTPVLRKSE.-..---LEYYAMLSKTKVYY..FQGGN-NELGTAVGKLFR-VGVVTILDAGDSDILT
Q9VJ19_DROME/12-106 ESTNARLALVMKSGK.YCLGYKQTLKTLRQG..KAKLVLIASNTPALRKSE.-..---IEYYAMLAKTEVQH..YSGTN-IELGTACGKYFR-VCTLSITDPGDSDIIR
Q9XWS4_CAEEL/12-106 ENINSRLSMVMKTGQ.YVLGYKQTLKSLLNG..KAKLVIIANNTPPLRKSE.-..---IEYYAMLAKTGVHH..YNGNN-IELGTACGRLFR-VCTLAVTDAGDSDIIL
RL30_MAIZE/12-106 DNINNKLQLVMKSGK.YTLGYKTVLRTLRNS..KSKLVIIANNCPPLRKSE.-..---IEYYAMLAKVTVHH..FHGNN-VDLGTACGKYFR-VCCLSIIDPGDSDIIK
RL30E_AERPE/3-97 VSVEKALKDLVKTGV.YAMGFKQSLKAVKAG..EAKAIVIAENTPPELRRK.-..---LEYYAKLAGIPIIV..YRGTR-MDMGLVMGRRHG-VSVLAVIDEGSSRILE
RL30E_SULAC/3-97 QSFEGELKTLLRSGK.VILGTRKTLKLLKTG..KVKGVVVSSTLRQDLKDD.-..---IMTFSKFSDIPIYL..YKGSG-YELGTLCGKPFM-VSVIGIVDEGESKILE
RL30E_METVA/7-101 MDINRAIRVAVDTGN.VVLGTKQAIKNIKHG..EGKLVIIAGNCAKDVKED.-..---IFYYTKLSETPVYT..HQVTS-IELGAICGKPFP-VSALLVLEPGNSAILN
RL30E_METTH/1-95 MDIDRGIRVAVDTGN.VILGSKRTIQSLKLG..KGKLVVMASNIPEDLKED.-..---IEYYAKLSEIPVYT..HEGTS-VELGSVCGKPFT-VGALLIQDPGDSTILE
RL30E_METJA/7-101 MDVNKAIRTAVDTGK.VILGSKRTIKFVKHG..EGKLVVLAGNIPKDLEED.-..---VKYYAKLSNIPVYQ..HKITS-LELGAVCGKPFP-VAALLVLDEGLSNIME
RL30E_THECE/2-96 VDFAFELRKAQDTGK.IVMGARKSIQYAKMG..GAKLIIVARNARPDIKED.-..---IEYYARLSGIPVYE..FEGTS-VELGTLLGRPHT-VSALAVVDPGESRILA
RL30E_PYRHO/1-95 MDLAFELKKALETGK.VILGSNETIRLAKTG..GAKLIIVARNAPKEIKDD.-..---IYYYAKLSDIPVYE..FEGTS-VELGTLLGKPFV-VASLAIVDPGESRILA
O77331_PLAF7/495-595 SVSHEKLLLLKKKKR.YFLGLKECYKHICID..EPKIVFIAPNIEPSLNNIfD..DTLGKIIAKCKEKNIPI..VFALSKNLLGKCINKSRQ-SIICIIDNDSYIKECN
SEBP2_RAT/650-752 DRMYQKDPVKAKTKRrLVLGLREVLKHLKLR..KLKCIIISPNCEKTQSKGgL.dDTLHTIIDCACEQNIPF..VFALNRKALGRSLNKAVP-VSIVGIFSYDGAQDQF