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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01248 phylogeny
for amino acid alignment


 
((((((((((((RS12_CAEEL/24-119,RS12_DROME/23-118),RS12_CYAPA/21-116),(RS12_HUMAN/15-110,((RS12A_SCHPO/31-126,RS12_ERYGR/16-111),RS12_YEAST/26-123))),RS12_PLAFA/23-119),(RS12C_ARATH/29-124,RS12_HORVU/28-123)),(O76223_9TRYP/29-124,RS12_TRYBB/30-125)),(GA45B_HUMAN/21-121,GA45A_HUMAN/21-123)),(((((RL7A_AERPE/17-111,RL7A_SULSO/17-111),(RL7A_PYRHO/17-111,(RL7A_HALMA/14-104,RL7A_METTH/17-111))),RL7A_METJA/15-106),RL7A_ARCFU/13-107),((((NHP2_YEAST/41-135,NHP2_SCHPO/39-133),(Q9V3U2_DROME/51-146,Q9XXD4_CAEEL/53-148)),((Q9SU26_ARATH/20-114,NHPX_YEAST/18-112),NHPX_DROME/19-113)),((((RL7A_CHICK/121-215,RL7A_ANOGA/128-222),((RL8B_YEAST/116-211,RL8_SCHPO/116-211),RL7A_ARATH/112-207)),Q9W3Z2_DROME/127-221),RP38_HUMAN/99-190)))),((YLXQ_ENTFC/7-98,YLXQ_BACSU/4-96),Q9WZN2_THEMA/7-99)),(((((RL30E_PYRHO/1-95,RL30E_THECE/2-96),((RL30E_METJA/7-101,RL30E_METVA/7-101),RL30E_METTH/1-95)),RL30E_SULAC/3-97),RL30E_AERPE/3-97),((Q9XWS4_CAEEL/12-106,((RL30_TRYBB/10-104,(Q9XG43_GUITH/11-105,RL30_MAIZE/12-106)),Q9VJ19_DROME/12-106)),(RL30_KLULA/7-101,RL30B_SCHPO/22-116)))),O77331_PLAF7/495-595),Y0256_HUMAN/711-813,SEBP2_RAT/650-752);
((((((((((((RS12_CAEEL/24-119:0.29753,RS12_DROME/23-118:0.28889):0.01847,RS12_CYAPA/21-116:0.25859):0.04486,(RS12_HUMAN/15-110:0.11183,((RS12A_SCHPO/31-126:0.14112,RS12_ERYGR/16-111:0.19318):0.02832,RS12_YEAST/26-123:0.34652):0.11930):0.01898):0.09891,RS12_PLAFA/23-119:0.60931):0.05506,(RS12C_ARATH/29-124:0.22222,RS12_HORVU/28-123:0.08585):0.17820):0.18271,(O76223_9TRYP/29-124:0.44000,RS12_TRYBB/30-125:0.17681):0.39822):0.54832,(GA45B_HUMAN/21-121:0.31817,GA45A_HUMAN/21-123:0.37457):0.79297):0.75646,(((((RL7A_AERPE/17-111:0.12024,RL7A_SULSO/17-111:0.17720):0.02712,(RL7A_PYRHO/17-111:0.06752,(RL7A_HALMA/14-104:0.40970,RL7A_METTH/17-111:0.13010):0.17499):0.04527):0.08107,RL7A_METJA/15-106:0.25011):0.06306,RL7A_ARCFU/13-107:0.27010):0.14524,((((NHP2_YEAST/41-135:0.18234,NHP2_SCHPO/39-133:0.20641):0.24968,(Q9V3U2_DROME/51-146:0.42760,Q9XXD4_CAEEL/53-148:0.33132):0.27067):0.32485,((Q9SU26_ARATH/20-114:0.09227,NHPX_YEAST/18-112:0.16867):0.09580,NHPX_DROME/19-113:0.13005):0.52704):0.14694,((((RL7A_CHICK/121-215:0.15901,RL7A_ANOGA/128-222:0.20062):0.09054,((RL8B_YEAST/116-211:0.10749,RL8_SCHPO/116-211:0.13833):0.23660,RL7A_ARATH/112-207:0.17534):0.17541):0.07762,Q9W3Z2_DROME/127-221:0.12234):0.78953,RP38_HUMAN/99-190:1.20860):0.36564):0.11800):0.10865):0.39835,((YLXQ_ENTFC/7-98:0.51982,YLXQ_BACSU/4-96:0.35183):0.44889,Q9WZN2_THEMA/7-99:0.72123):0.47233):0.15633,(((((RL30E_PYRHO/1-95:0.14002,RL30E_THECE/2-96:0.21700):0.23580,((RL30E_METJA/7-101:0.23042,RL30E_METVA/7-101:0.23795):0.15687,RL30E_METTH/1-95:0.07056):0.26341):0.12964,RL30E_SULAC/3-97:0.51461):0.18145,RL30E_AERPE/3-97:0.64839):0.25068,((Q9XWS4_CAEEL/12-106:0.14724,((RL30_TRYBB/10-104:0.30243,(Q9XG43_GUITH/11-105:0.67526,RL30_MAIZE/12-106:0.08511):0.09762):0.06830,Q9VJ19_DROME/12-106:0.13218):0.04328):0.08285,(RL30_KLULA/7-101:0.23258,RL30B_SCHPO/22-116:0.12549):0.03774):0.23013):0.88026):0.47103,O77331_PLAF7/495-595:0.91489):0.50220,Y0256_HUMAN/711-813:0.20416,SEBP2_RAT/650-752:0.18341);