EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01232 alignment
(16 sequences with 516 bp)


MTLD_BACST/1-124 ATGTTAGCAGTTCATTTCGGTGCTGGAAATATCGGAAGAGGA------------TTTATCGGGAGTTTGCTTTCACAG---TCGGGCTATGAAGTAGTGTTTGTGGATATTAATGATGAATTGGTTCGTTTA---...------------TTAAAGGAAAAACAGGAGTATCGTGTGATCATTGCCGAT------............---GAAAATAGACAAGAACTGCTGATTCGCAACGTTTCCGCTGTCAATAGTCAAACGGAACGT------GAAAAGGTCATTGACTATATCACAAAG------GCTCATCTTATTACAACGGCGGTCGGGCCG---------------------------------------CATATTTTACCGGCCATCGCCACGATTCTTGCTGAGGGG---------------------------------------CTGCAAAAAAGAATCACGATCAATAAAACACCGCTTCATATTATTGCTTGTGAAAATATG
MTLD_BACSU/1-122 ATGATCGCCTTACATTTCGGTGCGGGAAATATCGGGAGAGGA------------TTTATCGGCGCGCTGCTTCACCAC---TCCGGCTATGATGTGGTGTTTGCGGATGTGAACGAAACGATGGTCAGCCTC---...------------CTCAATGAAAAAAAAGAATACACAGTGGAACTGGCGGAA------............---GAGGGACGTTCATCGGAGATCATTGGCCCGGTGAGCGCTATTAACAGCGGCAGTCAGACC------GAGGAGCTGTACCGGCTGATGAATGAG------GCGGCGCTCATCACAACAGCTGTCGGCCCG---------------------------------------AATGTCCTGAAGCTGATTGCCCCGTCTATCGCAGAAGGT---------------------------------------TTAAGACGAAGAAATACTGCAAAC------ACACTGAATATCATTGCCTGCGAAAATATG
MTLD_STRMU/2-126 AAAAAAGCAGTACATTTTGGAGCAGGCAATATTGGCCGTGGC------------TTTATTGGACAAATTTTATTTGAA---AATGGCTTTGCTATTGATTTTGTCGATGTTAACGATAAAATTATTAATGCT---...------------CTTAATGAACGTCATTCTTATGATATTGAAATTGCAGAA------............---GATGGGAAACGTCACATTACAGTTTCTAATGTTGCTGGCATTAATAACAAGGAAAATCCT------CAAGCAGTCATTGATGCTGTGGCTGAG------ACAGAGTTGATTACAACCGCTATTGGCCCT---------------------------------------AACATTTTGCCTTTTATTGCCCAATTGATTGCCAAAGGTATT------------------------------------GAAAAACGTCGTGAAAGTCAGAATCAAACGCCACTTGATATCATTGCCTGTGAAAATATG
MTLD_ENTFA/1-125 ATGAACGCAGTACATTTTGGAGCAGGAAATATTGGACGCGGC------------TTTATCGGCGAAATTTTAGCTAAA---AACGGGTTTCATATTACGTTTGTGGATGTTAATGAAACCATCATTCAAGCG---...------------TTAAAAGAACGTAAAAGTTATACAATTGAATTGGCCGAT------............---GCCTCACATCAACAAATTAACGTTGAAAATGTGACCGGGTTAAATAACATGACAGAACCA------GAAAAAGTAGTAGAAGCAATTGCGGAA------GCCGATTTAGTCACGACGGCAATTGGTCCT---------------------------------------AATATTTTACCAAGAATTGCTGAATTAATTGCTCAAGGAATT------------------------------------GATGCACGTGCCGAAGCAAATTGTCAAAAGCCGCTGGATATTATCGCTTGTGAAAATATG
MTLD_ECOLI/1-123 ATGAAAGCATTACATTTTGGCGCAGGTAATATCGGTCGTGGC------------TTTATCGGTAAACTGCTGGCAGAC---GCGGGTATCCAACTGACGTTTGCCGATGTCAATCAGGTGGTACTTGATGCC---...------------CTGAATGCCCGTCATAGCTATCAGGTACATGTGGTTGGT------............---GAAACCGAGCAGGTAGATACCGTTTCCGGCGTCAATGCTGTCAGCAGCATTGGT------------GATGATGTCGTTGATCTGATTGCTCAG------GTTGATTTAGTCACTACCGCCGTTGGCCCG---------------------------------------GTTGTGCTGGAACGTATTGCTCCGGCAATCGCCAAAGGGCAG------------------------------------GTGAAACGTAAAGAACAAGGTAATGAATCCCCGCTGAACATCATCGCCTGTGAAAACATG
MTLD_CLOAB/1-123 ATGAAAGCACTTCATTTTGGAGCAGGAAACATAGGAAGAGGT------------TTTATAGGTTATTTACTGTATAAG---TCTAATTACGAAACTACCTTCGTTGATATATTTGATAAAGTAGTGGATGAT---...------------ATCAATAAATATAAAAGATATACAGTAATAACTTTGAGT------............---ACATCTAAGAATAAGGAGAAAGTTGAGAATGTACGAGCAGTCAATTTGAAAGATAGT---------GTTGCTCTTGAAAAAGAAGTTTTAGAA------GCTGATTTAATAACTACATCATTAGGATTA---------------------------------------AATAATTTAAAAAGTACAGGAGAGCTTTTAAGAGGATTC---------------------------------------CTTAAAAAGAGATCAGAAATCAATGACAAGCCACTTGATATAATAGCATGTGAAAATGCA
MTLD_MYCPN/4-118 ATTAATGTATTGCACTTTGGCGCTGGTAATATAGGTAGAGGT------------GTTATATTACCGATTTACCAACAA---AATGACTTTTCCATTGATTTAGTGGAATTGAATCAAAATACAGTTAATGAG---...------------TTACAAAAGCAAAAACAATACCAAGTTCATTACCTTGAT------............------TGTGATCAAAGTCAGTTAGTTAATGACTTTAATACTTGAAACTTAAAGGATGAAGCG---------AAGATTATTGAACTAATGGAAAGA------GCTGATGTTATTTCCACTTCAATAGGTGCT---------------------------------------AAAAACTTAGCTAGTTTAAAAACTTTGTTTGACAAAGCT------------------------------------------------------------AAGTTCCATAAAAGGGCTATAGTGCTTTGCTTTGAAAAC
YDFI_ECOLI/22-185 CCAAGAATTGTTCATTTAGGCTTTGGTGCATTTCACCGTGCGCATCAGGGTGTGTATGCCGATATTCTTGCTACGGAA---CATTTCAGTGACTGGGGATATTATGAGGTCAACTTAATCGGCGGCGAACAG---...CAAATTGCCGATTTACAACAGCAAGATAATCTTTATACCGTTGCGGAAATG---TCG............GCCGATGTGTGGACGGCTCGCGTCGTTGGCGTCGTTAAAAAAGCCTTGCACGTACAGATAGATGGCTTAGAAACCGTGTTGGCAGCGATGTGTGAACCGCAAATCGCGATTGTCTCTCTGACAATCACCGAAAAAGGGTATTTCCACTCTCCGGCGACCGGACAGTTAATGCTCGATCACCCGATGGTAGCTGCCGACGTGCAAAATCCCCACCAGCCGAAAACAGCAACAGGGGTGATTGTTGAGGCGCTGGCTCGCCGTAAAGCGGCAGGACTTCCCGCATTTACCGTCATGTCATGTGACAACATG
UXUB_ECOLI/23-188 TCACGCATTGTGCATCTCGGTTGCGGGGCGTTTCACCGCGCGCACCAGGCGCTGTATACCCATCATCTGCTGGAAAGC---ACCGACAGCGACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCAACGACCGCgtgCTGATCGAAAACCTGAAAAAACAGCAACTGCTGTACACCGTAGCGGAAAAA---GGC............GCAGAGAGCACCGAGCTGAAAATTATCGGTTCGATGAAAGAAGCGCTGCATCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTG
YEIQ_ECOLI/25-188 TCACGTATCGTTCATTTTGGCTTTGGAGCCTTTCACCGCGCTCATCAGGCGTTACTGACCGATCGTGTGCTGAATGCC---CAGGGCGGCGACTGGGGGATCTGTGAAATCAGCTTGTTCAGCGGTGATCAA---...CTGATGAGCCAGCTCCGCGCACAGAACCATTTATATACCGTGCTGGAGAAA---GGT............GCGGACGGCAATCAGGTGATAATTGTCGGTGCCGTTCACGAATGCCTTAATGCAAAACTGGATTCCTTAGCGGCAATTATTGAGAAATTTTGCGAGCCACAGGTGGCAATTGTTTCCCTGACGATTACCGAAAAAGGCTATTGTATTGACCCGGCCACCGGTGCACTCGACACCAGTAATCCGCGGATTATTCACGATCTACAAACCCCTGAAGAACCTCACTCCGCACCGGGTATTCTCGTCGAAGCACTGAAACGCCGCCGTGAGCGCGGCCTTACACCGTTTACCGTGCTCTCCTGCGACAATATT
YEI0_YEAST/36-200 CAAGGTATTGTTCATCTGGGAGTCGGTGCATTCCACCGTTCCCATTTAGCTGTTTTCATGCACCGTCTGATGCAGGAGCACCACTTAAAGGACTGGTCCATATGTGGTGTTGGTTTAATGAAGGCAGATGCACTT...ATGCGCGATGCCATGAAGGCCCAAGATTGCCTATACACCCTTGTGGAGCGT---GGT............ATCAAGGACACTAACGCTTATATCGTCGGTTCCATTACTGCTTACATGTACGCTCCCGATGAT---CCAAGAGCTGTTATTGAAAAGATGGCCAATCCAGACACACACATTGTTTCTTTGACGGTCACAGAAAACGGTTACTACCACAGTGAAGCAACAAACTCCTTAATGACAGATGCTCCCGAGATTATCAATGATTTGAACCACCCAGAAAAGCCAGATACTCTGTATGGGTACCTATATGAAGCCCTGTTGTTGCGTTACAAGAGAGGTCTTACCCCATTCACTATTATGTCATGTGACAACATG
MTLK_RHOSH/16-179 CCCGGCATCGTCCATATCGGCGTCGGCAACTTCCACCGGGCGCATCAGGCGGTCTATCTCGACGATCTCTTCGCGCTGGGCGAGGGCCACGACTGGGCCATCCTCGGCGCGGGCGTCCGCCCGACCGATGCGCGG...ATGCGCGAGGCTCTGGCCGCGCAGGACAATCTCTCGACGGTGATCGAGCTC---GAT............CCGGCGGGCCACCGGGCCCGGCAGGTGGGGGCGATGGTGGGCTTCCTGCCGGTCGAGGCCGAC---AATGCGGCCCTGATCGAGGCCATGTCGGATCCGCGCATCCGCATCGTCTCGCTGACCGTGACCGAGGGCGGCTATTATGTCGATGCCTCG---GGCGCCTTCGATCCGACGCATCCCGATATCGTGGCCGATGCGGCCCATCCTGCGCGGCCCGCGACCGCCTTCGGCGCGATCCTCGCCGCCCTCCGCGCCCGCCGCGACGCGGGGGTTACACCCTTCACCGTGATGTCCTGCGACAACCTC
O68111_RHOCA/17-181 CCCGGCATCGTCCATATCGGGCTTGGCAACTTTCACCGCGCGCATCAGGCGGTTTATCTGGATGACCTTTTCGGCTTGGGCGAGGGGCACGACTGGGCGCTGATCGGCGCCGGTGTCCGCGCCCCCGATGCCGCG...ATGCGTGAGGTGCTTCTGGCGCAGGACGGCCTGTCCTCGGTGATCGAACTC---GCC............CCCGGCGCCCATTCCGCCCGCGTGATCGGCGCGATGATCGACTTTGTCGCGGTGCAACCGGGC---AATGCCGCGCTGATCGCCACGATGGCGCGGCCGGAGATCCGCATCGTCAGCCTGACCGTGACCGAGGGCGGCTATTACATCGACCCGAACACCGGCACCTTCAGCCCCGATCACCCGGACATTCAGGCCGATGCCGCCCGTCCCGATGCGCCTGACACCGCCTTTGGCGCGATCATCGCCGCGCTGAAGATGCGCCGCGCCGCGGGCGTCGCCCCCTTCACCGTGATGTGCTGCGACAACGTC
O08355_PSEFL/27-192 CAGGGCATCGCCCATATCGGCGTCGGCGGCTTCCATCGCGCGCACCAGGCGTATTACACCGATGCGCTGATGAATACCGGCGAGGGCCTGGACTGGAGCATCTGCGGCGTTGGCCTGCGCAGCGAGGACCGCAAG...GCCCGCGATGACCTGGCCGGCCAGGACTACCTGTTCACCCTGTACGAACTGGGCGAC............ACCGACGACACCGAAGTGCGCGTGATCGGCTCGATCAGCGACATGCTGCTGGCCGAAGACAGC---GCCCAGGCATTGATCGATAAACTGGCCAGCCCCGAGATTCGCATCGTCTCGCTGACCATCACCGAAGGCGGCTACTGCATCGACGACAGCAACGGCGAATTCATGGCCCACTTGCCGCAGATCCAGCACGACCTGGCTCATCCGTCGTCGCCAAAAACCGTGTTCGGCTTTATCTGCGCGGCATTGACCCAGCGCCGCGCGGCCGGCATCCCGGCGTTTACCGTGATGTCCTGCGATAACCTG
DALD_KLEPN/5-166 TTCACATGGCTTCATATCGGTCTGGGTTCTTTTCATCGCGCGCATCAGGCGTGGTATCTGCATCGTCTGATTGCTTCC---GGGGATAATCGCTGGCGCATCGCGGCGGGGAATATTCGCAACGACGCCGAGCAG...GTGGTCCAGGCGCTGGCGGCGCAGGGAGGACGTTACGTCCTCGAGACCGTCAGCCCG............GAAGGGGAGCGCGAATATGAAGAGATCACCTCAATCCAGAAACTGCTACCGTGGCAGGCCGGG---CTACAGCCGCTGATTAACGAAGGGGCAAACCCGCAGACCAAAGTTATCGCCTTTACCGTGACGGAAGGGGGGTACTACCTGAAC---ACTCGCCATCGGCTGGAAACCAGCAACCCCGATCTGCAGGCCGACCTGCAAGGCGAGTGCAAA------ACCATTTACGGCACCCTCGCGCGGATCCTGGAAAAGCGCATGGCCGACAACGCCGGGCCGCTGACCCTGCTCAACTGCGATAACGTG
UXAB_ECOLI/16-173 GAACGTATCATTCAGTTTGGTGAAGGTAACTTCCTGCGCGCCTTTGTTGAC---TGGCAAATCGATCTCCTGAATGAGCACACCGATCTGAATTCTGGCGTGGTCGTTGTTCGTCCGATTGAAACTTCATTCCCG...------CCGTCACTGAGCACGCAGGATGGTCTGTACACCACCATTATCCGTGGCCTGaatgagaaggggGAAGCGGTCAGCGACGCGCGTCTGATTCGCTCGGTTAATCGTGAAATCAGCGTCTACAGTGAATAC---GATGAATTCCTGAAACTGGCGCACAACCCGGAAATGCGCTTTGTTTTCTCTAACACCACCGAAGCGGGT------ATCAGCTACCATGCGGGCGATAAATTCGATGACGCGCCAGCGGTAAGCTATCCGGCAAAACTGACCCGT---------------------CTGCTGTTCGAACGCTTTAGCCATTTCAACGGTGCGCTGGATAAAGGTTGGATCATCATTCCGTGTGAGTTGATT