EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01230 alignment
(23 sequences with 342 bp)


YHI1_MYCLE/3-102 ACGATCTTCACCAAAATCATTAACCGCGAACTACCCGGCCGCTTCGTCTACGAGGACGACGACGTCGTCGCATTCCTCACTATTGAGCCAATGACACAAGGCCATACGCTAGTAGTGCCA......TGCGCCGAGATCGATCAGTGGCAGAACGTGGATCCT.........GCGATA---------...TTTGGTCGCGTTATAGCCGTGAGTCAGCTGATCGGCAAGGGCGTATGCCGGGCGTTTAACGCCGAACGGGCCGGGGTGATCATC---------------GCCGGATTTGAAGTACCCCATCTGCACATCCATGTGTTTCCTACCCATAGCCTG
YHIT_HELPY/2-104 AATGTGTTTGAAAAAATAATCCAAGGCGAAATCCCTTGTTCTAAGATTTTAGAAAACGAGCGTTTTTTATCCTTTTATGACATTAACCCTAAAGCTAAAGTGCATGCGTTAGTGATCCCT......AAGCAAAGCATTCAGGATTTTAATGGCATCACCCCA.........GAGCTT---------...ATGGCTCAAATGACAAGCTTTATTTTTGAAGTGGTGGAAAAATTA------GGCATCAAAGAGAAGGGTTACAAGCTTTTAACCAATGTAGGTAAAAACGCCGGGCAAGAGGTGATGCATTTGCATTTTCATATTTTAAGCGGAGACAAACAT
YHIT_AZOBR/9-115 AACGTCTTCGCCCGCATCCTGCGCGGCGAAATCCCGTGCAAGAAGGTCCTGGAGACCGAGCACGCTCTGGCCTTCCACGACATCAACCCGCAGGCCCCGACGCACATCCTGGTGATCCCC......AAGGGCGCCTACGTCGACATGGACGATTTCAGCGCC.........CGCGCGACGGAGGCGgagATCGCCGGCCTGTTTCGCGCGGTCGGCGAGGTGGCGCGCGGCGCC------GGCGCCGCCGAGCCCGGTTACCGCATCCTGTCCAACTGCGGCGAGGACGCGAACCAGGAGGTTCCGCACCTGCACATCCACGTCTTCGCCGGCCGCCGCCTC
PKIA_DICDI/68-172 ACAATATTTGCAAAAATTATTTCTGGTGCAATCCCATCAAAAAAATTTTACGATGATGAATATTGTATTGCAATCGAAGATATTAACCCACAAGCACCAGTACATCTTTTAGTTATTCCA......AAACTTGCCGTTGGTGGTCTTAGTGATGTCGCCAATgttgaccttGAAAAATACAAAGAAtctATGGGTCATATCATGTCAAAAATTCATCATATCGCTTCTCTTAAA------------GGTGCTGATTCTTACAGATTGGTCATTAATGAAGGTGTTTTAGGTCAACAATCTGTTAGATGGTTACATATTCATATCCCTTGGTGG---------
ZB14_MAIZE/17-123 ACTATATTTGACAAGATCATCAAAAAGGAAATACCTTCTACTGTGGTTTATGAGGACGAGAAGGTACTGGCTTTCAGGGACATAAACCCTCAAGCTCCAACACACATTCTCATCATCCCCaaagtcAAGGATGGACTAACTGGCCTGGCCAAGGCTGAAGAG.........AGGCACATAGAGATA...CTTGGCTATCTCCTCTATGTTGCCAAGGTTGTTGCGAAGCAGGAA------GGACTT---GAAGATGGCTATCGCGTTGTCATCAATGACGGCCCAAGTGGATGTCAATCTGTTTACCACATCCACGTTCATCTCCTCGGAGGCAGGCAAATG
YCFF_ECOLI/5-110 ACTATATTCAGCAAAATTATTCGTCGTGAGATCCCCTCCGATATCGTCTACCAGGATGATCTGGTAACGGCGTTTCGCGATATTTCGCCGCAAGCGCCAACGCATATTCTGATCATTCCG......AATATCCTCATTCCGACTGTGAACGACGTCTCAGCT.........GAGCATGAGCAGGCG...CTGGGACGCATGATCACCGTAGCGGCAAAAATTGCTGAGCAAGAA------GGTATTGCCGAAGATGGCTATCGTCTGATCATGAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTG
YHIT_CAEEL/21-125 ACTCTTTTCGGAAAAATAATTCGAAAAGAGATTCCAGCGAAAATCATTTTTGAAGATGATGAGGCTCTCGCATTCCATGATGTCTCTCCACAAGCTCCAATTCATTTTCTTGTGATCCCT......AAGCGTCGCATTGATATGCTCGAGAATGCCGTTGAT.........TCGGATGCTGCGCTT...ATTGGAAAGCTTATGGTTACTGCTTCAAAGGTTGCAAAGCAGCTC------GGCATG---GCCAATGGATACCGTGTTGTTGTGAACAATGGAAAAGATGGAGCTCAATCAGTTTTCCATCTTCATCTCCACGTTTTGGGAGGACGTCAGCTC
HINT1_RAT/16-120 ACGATCTTCGGGAAGATCATTCGCAAGGAAATCCCCGCCAAAATCATTTATGAGGATGACCAGTGTCTTGCTTTCCATGACATTTCCCCTCAAGCACCAACACATTTTCTGGTGATACCC......AAGAAATATATATCTCAGATTTCTGCAGCAGAAGAT.........GATGATGAAAGTCTT...CTTGGGCATTTGATGATTGTTGGCAAGAAATGTGCTGCTGATCTG------GGCCTGAAG---AAGGGCTATCGAATGGTGGTGAATGAAGGTTCAGATGGGGGCCAGTCTGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAAATG
YHIT_SYNY3/5-109 ACCATTTTCAGTAAAATTATCCGTCGGGAAATTCCAGCGGCGATCGTCTATGAAGATGATCTTTGCCTAGCTTTCAAGGATGTTAATCCCCAAGCGCCAGTCCATGTGCTTTTAATCCCC......AAAAAGCCTTTACCCCAATTGTCAGCGGCCACCCCG.........GAAGACCATGCCCTA...CTGGGTCATCTTTTGCTCAAAGCCAAGGAAGTAGCGGCGGATCTA------GGCATT---GGCGATCAATTTCGCTTAGTCATTAATAACGGGGCGGAAGTGGGGCAAACTGTGTTCCATCTCCACCTCCATATCCTTGGCGGTCGCCCTTTT
YHIT_SYNP7/5-109 ACCATCTTTGGCAAGATCATCCGGCGCGAGATTCCAGCAGACATTGTTTATGAAGATGATCTCTGTCTGGCTTTTCGAGATGTGGCACCCCAAGCGCCGGTTCACATTCTGGTGATTCCC......AAGCAACCAATTGCCAACCTTTTGGAAGCGACAGCA.........GAACATCAAGCGCTG...CTGGGTCATTTGTTGCTGACTGTAAAGGCGATCGCGGCCCAAGAA------GGACTC---ACCGAGGGCTACCGCACCGTGATTAACACGGGCCCTGCGGGTGGGCAAACCGTTTACCACCTGCATATTCACTTACTGGGCGGGCGATCGCTG
Y866_METJA/2-105 TGTATCTTCTGCAAAATAATCAATGGAGAGATTCCAGCAAAGGTTGTTTATGAAGATGAGCATGTTTTAGCTTTTTTAGATATAAATCCAAGAAATAAAGGGCATACTTTGGTTGTTCCT......AAAAAGCACTATGAAAGATTTGATGAAATGCCTGAT.........GATGAG---------...CTCTGCAACTTTATAAAAGGAGTTAAAAAGACTGTTGAAGTTCTA---AAAAAGCTTGGATTTGATGGCTACAATATAGTCAATAACAACGGCAGAGTTGCGGGGCAAGAAGTTAATCATGTTCATTTCCATATCATTCCAAGGTATGAAGGA
HNT1_YEAST/25-125 TGTATTTTTTGCAAGATTATTAAAAGCGAAATTCCATCCTTCAAATTGATTGAAACAAAGTACTCGTATGCTTTCTTGGACATCCAACCTACTGCTGAAGGTCATGCTTTAATCATTCCT......AAGTACCATGGTGCGAAGTTGCATGACATCCCGGAC.........---------------...------GAATTCCTTACCGATGCTATGCCGATTGCCAAGAGACTGGCCAAGGCAATGAAGTTGGACACTTATAATGTGTTGCAGAATAATGGTAAAATTGCGCATCAAGAAGTCGACCACGTCCACTTCCATTTGATTCCTAAGAGAGATGAG
YHIT_MYCGE/9-113 TGTATCTTTTGTGATATTGTTCAAGGTTCAATTACATCCTATAAAATTGGAGAAAATGAGCATGCCATTGCTTTTTTAGATGCTTTTCCTGTAGCTGATGGTCATACTTTAGTAATCCCT......AAAAAACATGCAGTTGATTTTTCTTCAACTGATCAA.........AAAGAG---------...TTACAAGCAGTTAGTTTATTAGCAAAACAAATCGCTTTAAAACTAAAGATGACACTAAAACCATCTGGTTTAAACTATGTTTCTAATGAAGGGGCAATTGCAGGTCAAGTGGTTTTTCATTTTCACTTACACATAGTACCCAAATATGAAACT
YHIT_MYCPN/12-116 TGTATCTTCTGTGGAATTGTAGAGGGGAATGTGAAATCCTTTAAGGTTGGTGAAAACGAACACGCTTTTGCCTTTTTAGATGCCTTTCCAGTTGCTGATGGTCATACGCTTGTAATTCCC......AAAAAACACGCCGTTAACTATTCCTCGACTGATGAT.........GAGAGT---------...TTGAAGGCGGTTAGTTTACTCGCCAAAGAAATGGCTTTAAAGCTACAACAACGGCTCCAACCAGCTGGATTAAACTATGTTGTCAATGAAGGGGCTAAGGCAGGGCAGGAAGTATTTCACTACCACATGCATGTAGTACCAAAATACGAAACT
YHI2_MYCTU/3-107 TGCGTGTTCTGTGCGATCATCGCCGGGGAGGCTCCGGCCATCCGGATCTACGAGGACGGCGGCTATCTCGCGATCCTCGACATCCGCCCGTTCACCCGCGGCCACACGCTGGTGCTGCCC......AAGCGACACACCGTTGACCTCACCGACACCCCGCCG.........GAGGCG---------...TTGGCTGACATGGTCGCCATCGGCCAACGCATCGCGCGGGCGGCCCGCGCCACGAAGTTGGCTGACGCGACACACATCGCCATCAACGACGGCCGTGCCGCTTTTCAGACGGTGTTCCACGTTCACTTGCACGTATTACCGCCGCGCAACGGC
APH1_SCHPO/4-105 CTATATTTCTCCAAGTTTCCTGTT---------GGAAGTCAAGTTTTTTATCGTACTAAGTTATCTGCCGCGTTTGTAAACCTGAAACCAATTTTACCAGGTCATGTTTTGGTAATTCCG......CAACGGGCGGTCCCTAGATTGAAAGATTTGACACCT.........TCAGAG---------...TTGACGGATTTGTTTACTTCTGTTCGCAAAGTGCAACAGGTAATCGAAAAGGTGTTTTCGGCATCTGCATCAAACATTGGTATTCAAGATGGTGTAGACGCTGGTCAAACAGTTCCTCATGTACATGTTCACATTATCCCTCGTAAAAAGGCA
FHIT_HUMAN/2-104 TTCAGATTTGGCCAACATCTCATC------AAGCCCTCTGTAGTGTTTCTCAAAACAGAACTGTCCTTCGCTCTTGTGAATAGGAAACCTGTGGTACCAGGACATGTCCTTGTGTGCCCG......CTGCGGCCAGTGGAGCGCTTCCATGACCTGCGTCCT.........GATGAA---------...GTGGCCGATTTGTTTCAGACGACCCAGAGAGTCGGGACAGTGGTGGAAAAACATTTCCATGGGACCTCTCTCACCTTTTCCATGCAGGATGGCCCCGAAGCCGGACAGACTGTGAAGCACGTTCACGTCCATGTTCTTCCCAGGAAGGCTGGA
Q9A2A9_CAUCR/2-106 GCTGAGTTCCAGCTCGACCCGGCGTTCGTCGCGACCTCGCACGCGGTGATCGACCTGCCGCTGTGCGAGGTCCGGCTGCAGGACGACGCCCGCTATCCTTGGCTGGTGCTGCTTCCGCGC......CAGCCGGGCCTGCGAGAGCTCGAGGACCTGACCCCC.........GCAGAG---------...CGCGCCCAGCTGATGGAAGAAACCATCCGCGCCGGATCAGCCGTCCGCGCGGTTGGAGCCCTGCTGGGCCTCCGGATCGATAAGCTGAACATCGGCGCTCTGGGCAATGTCACCGCCCAGCTGCATGTCCATGTGGTGGGGCGGCGGGGCGAT
Q98BM9_RHILO/7-106 GCCGGATTCACGCTGGATGCCCGGCTGGAGGCGGACAGCGAGCAGGTGATGTGGCTTGGGCTGTGCGAATTGCGCGTGATGAACGACCGCCGCTGGCCATGGCTGGTGTTGGTGCCGCAG......CGGCCGGGCGCGGAAGAAATCCACGACATGACGCCG.........CTCGAC---------...CAGGCGATGCTGACCTTCGAAACCAATATGGTGGCGCAGGCGCTGAAGAAAGTCAGCGGC---------------TGCACCAAGATCAACACCGGCGCACTCGGCAATATCGTGCGCCAACTGCATATCCATATCGTCGCTCGGTCCGAAGGC
Q9KQC5_VIBCH/7-106 GCGCATTTTGAACTGCATCCCCAATTGCAAAAAGACACCGATGTGATCGGCCATTTCCCGCTCTGTGTTGCTCTGTTACATAAAGATTCTGCCGTGCCTTGGGTTATTTTAGTCCCGCAA......AGAGCGGATTTACGTGAACTACACCATCTGCCAATG.........GATGAG---------...CAGCAGCAGTTTTTAGTCGAATCGCAGCTGGTTTGCCAAACTCTGGAAACTCTATTTTCC---------------CCAGACAAACTCAACTTAGGTGCTCTAGGCAATATGGTGCCACAACTGCACATCCATCATATTGCGCGCTTTACCCAT
Q9I500_PSEAE/67-166 AGTATGTTCGCTTTGGATCCCCGGCTGGAGCAGGACACCCTGTTGCTCGGCGACTTTCCCCTCAGCCGCCTGCTGCTGATGAACGATGCCCGCTATCCGTGGTTCATCCTGGTGCCGAGG......CGGGAGGATGTCACCGAGCTGTTCCAGCTCGATGTC.........GATGAC---------...CGGCAGGCGCTGTGGCGCGAGGCCACGCTGCTGGCAGAGGTCCTCAAGGACACCTTCCGT---------------GCGGACAAGATGAATGTCGCTAACCTGGGCAATGTGGTCAGCCAGCTTCACATGCACGTGATCGTCCGGCGACGTGGT
Q9JYE4_NEIMB/3-102 GCCCAACCCTGCCCCATCTGCACGGCGCAAAATGAAGACGTTTTGCTGCAAACCCCCAACCTCCGCGTCATCGCCGTCCATAACGACAGCGGTTCGCCTGCATTCTGCCGCGTCATTTGG......CGTAAGCATATTGCCGAAATGACCGACCTTTCGGCA.........GCGGAA---------...CGCGGCGAATTGATGGAAATGGTGTACAAAGTCGAAGCCGCTATGCGCCAAGTGTTCCGG---------------CCGGCAAAAATCAACCTCGCCAGCTTGGGCAATGTCGTGCCGCACCTGCATTGGCATATTATCGCCCGCTTTGAAAAC
Q9JTD8_NEIMA/3-102 GCCCAACCCTGCCCCATCTGCACGGCGCAAAATGAAGACGTTTTGCTGCAAACCCCCAAGCTGCGCGTCATCGCCGTCCATAATGATAGCGGTTCGCCTGCATTCTGCCGCGTCATTTGG......CGTAAGCATATTGCCGAAATGACCGACCTTTCGGCA.........GCGGAA---------...CGCGGCGAATTGATGGAAATGGTGTACAAAGTCGAAGCCGCTATGCGCCAAGTGTTTCAA---------------CCTGCCAAGATTAACCTCGCCAGCTTGGGCAATGTCGTGCCGCACCTGCATTGGCATATTATCGCCCGCTTTGAAAAC