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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF01230 - HIT) |
| HIT domain |
| (Pfam reference: accession no. PF01230) |
| (Interpro reference: accession no. IPR001310) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
26 sequences @ 114 aa (ave. pairwise identity: 0.29) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 15.98) |
| nucleotides (available for above) |
23 sequences @ 342 bp (ave. pairwise identity: 0.41) |
New Hampshire format (total tree length: 10.53) |
|
amino acids, restricted set (corresp. to available nt seqs) |
23 sequences @ 114 aa (ave. pairwise identity: 0.29) |
New Hampshire format (total tree length: 14.36) |