EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01214 - CK_II_beta)
Casein kinase II regulatory subunit
(Pfam reference: accession no. PF01214)
(Interpro reference: accession no. IPR000704)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 208 aa
(ave. pairwise identity: 0.52)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.06)
nucleotides
(available for above)
7 sequences @ 624 bp
(ave. pairwise identity: 0.53)
New Hampshire format
(total tree length: 2.71)
amino acids, restricted set
(corresp. to available nt seqs)
7 sequences @ 208 aa
(ave. pairwise identity: 0.52)
New Hampshire format
(total tree length: 3.06)