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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01208 alignment
(15 sequences with 390 aa)


Q48950_METBA/5-337 TPKERLYRALRKQQVDRMPAVCFTQTA--TVEQMEACG--AYWPEAHSDAEKMATLAEAAHTVVG..FEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIK.PSVKNLEDLEKLKNYNLKEGRIAVVLEAVKILSEKYGKEIPIIGSMIGPFSLAQHINGDAWFGNLFTG-------EEIVPALLDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAM.KELDVAT--....................--VLHICGNTTNGLGIMDKT-.......GVNGISVDQKVDIKTATGN--VKN.ALIVGNLDPVAVLWNGTPEEIAEVSKKVLDA-------GVGLLTVGCGTVSMTPTVNLQKMIECAKSH
Q48927_METBA/5-337 TLKTRLLAALEGKPVDKVPVCSVTQTG--IVELMDEVG--AAWPEAHTNPELMAKLAIANYELSG..LEAVRLPYCLTVLGEAMGCEINMGTKNRQPSVTAsPYPKNLDGAAVPADL-LQRNRIPAVLEAIKIVREKVGPDVPIIGGMEGPVTLASDLISVKSFMKWSIKK------TDLFEQALDISTEAAIAYANAMVEAGADVIAIADPVASPDLMSPDTFRQF---LQSRLQKFS.ASVNSVT--....................--VLHICGKVNAILSDMADC-.......GFEGLSVEEKIG-DAAEGKKVIGDrARLVGNISSPFTLLPGPIDKIKAEAKVALEG-------GIDVLAPGCGIAPMTPLENIKALVAARDEY
Q48924_METBA/6-334 TPTRRVMAAVLGGRVDYVPPANPLAQT--TTELMQICN--ASWPKAHFDSKMMADLAAAPYEICG..IEAARPQFDISLEAEVLGCKLDWNKPDRPPVTGP.AYTDPADITWPDNLEE--AGRIPVVLGAIEELRKRYDGMLPVIPVLTSPFTVAGHIAGVENLVRWTKTD------PEKAHAFIEAATDFVIAYGKLQTAYGAHILFPADPSASGDLISGETYKEFVLPAHKRMA---.KEISCPL--....................--ILHICGDTSKLLPYIKQS-.......GIDCFSFDAVPVWYCRQVMGNEMS.--ILGSLDVIDLMPNGTPEQVYNRTRECILQ-------GADIVGTACDVSFGTSLENLRAYVRACKET
DCUP_YEAST/7-359 PKNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKN-NRDFFQTCRDAEIASEITIQPVRRYRglIDAAIIFSDILVIPQAMGMRVEMLEG-KGPHFPE.PLRNPEDLQTVLDYKVDVLKELDWAFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHKLLQKITDVAVEFLSQQVVAGAQILQVFESWG--GELSSVDFDEFSLPYLRQIAERVpKRLQELGIMeq..................IPMIVFAKGSWYALDKLCCS-.......GFDVVSLDWSWDPREAVKINKNRV.T-LQGNLDPGVMYGSKEVITKKVKQMIEAFGG----GKSRYIVNFGHGTHPFMDPDVIKFFLEECHRI
DCUP_MOUSE/14-360 LKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPLRRFP..LDAAIIFSDILVVPQALGIEVTMVPG-KGPSFPE.PLREERDLERLRDPAA-AASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLGILTDVLVPYLIGQVAAGAQALQLFESHA--GHLGTELFSKFALPYIRDVAKRVkAGLQKAGLAp...................VPMIIFAKDGHFALEELAQA-.......GYEVVGLDWTVAPKKARERVGKAV.T-LQGNLDPCALYASEEEIGRLVQQMLDDFG------PQRSIANLGHGLYPDMDPERVGAFVDAVHKH
DCUP_DROVI/21-385 LKNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRK-QHDFFTVCRTPELACEVTMQPLRRFD..LDASIIFSDILVIPQALGLTVEMHAG-VGPVLPQ.PICTPEDLKRLTPDGA--LSRLTYVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPEDTKLFLILLTDVIVDYLEMQVIAGAQMLQVFESSA--EHLSKEEFLLGSEPYLRRIRDDLvDRLTKKVIPavplvssypnniftlltyliSLLIIFAKGAGHSLKEQSEL-.......GYDVIGLDWTVDPVEARAVVGPNI.T-LQGNLDPQSMYCEPNELRSLATEMVHKCG------KSRYIANVGHGITPQTPITSMEVLVEAAHNA
DCUP_ECOLI/4-348 LKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRYP..LDAAILFSDILTVPDAMGLGLYFEAG-EGPRFTS.PVTCKADVDKLPIPDP--EDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWG--GVLTGRDYQQFSLYYMHKIV---.DGLLRENDG..................rrVPVTLFTKGGGQWLEAMAET-.......GCDALGLDWTTDIADARRRVGNKV.A-LQGNMDPSMLYAPPARIEEEVATILAGFGHG-----EGHVFNLGHGIHQDVPPEHAGVFVEAVHRL
DCUP_STRCO/15-352 TYDSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVRE-GIPMLESCMRPELVAEITLQPVRRHG..VDAAVYFSDIVVPLKAIGIDLDIKPG-VGPVIAE.PIRTRADLARLRDLTP---EDVAYVTEAFGLLTRELGA-TPLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPQLWADLLDRLAGITAAFLKVQIEAGASAVQLFDSWV--GALSPADYRRSVLPASRKVF---.EAVSGYGVP....................--RIHFGVGTGELLGLLGEAG.......-ADVVGVDWRVPLDEAARRVGPGK.A-LQGNLDPAVLFAGREAVETKTREVLD-----AATGLEGHVFNLGHGVLPTTDPDALTRLVEYVHTQ
DCUP_MYCLE/7-357 LLESPYLAAVSGRKPCRVPVWFMRQAGRSLPEYRALRE-RYSMLAACFEPEVACEITLQPLRRYD..VDAAILFSDIVVPLCAAGIDLDIVPD-VGPVIGD.PVRTATDIHAMKPLEP---QAIQPIFQAISLLVAALGD-VPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDLTLGFLLGQIDAGVDAIQVFDSWA--GTLSLSDYRQYVLPHSARIF---.ATVAEHGVP....................--MTHFGVGTADLLGAMSAAVrsgekpgHQAVVGVDWRTSLTDAAARVEPCT.A-LQGNLDPVVLLAGWPAVERVARTVVDDGRRAVVAGAAGHVFNLGHGVLPETDPGVLSELVSFIHSL
DCUP_BACSU/6-343 TFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKE-KYGLFEITHQPELCAYVTRLPVEQYG..VDAAILYKDIMTPLPSIGVDVEIKNG-IGPVIDQ.PIRSLADIEKLGQIDPE--QDVPYVLETIKLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWV--GALNQADYRTYIKPVMNRIF---.SELAKENVP....................--LIMFGVGASHLAGDWHDLP.......-LDVVGLDWRLGIDEARSKG-ITK.T-VQGNLDPSILLAPWEVIEQKTKEILDQG-----MESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEY
DCUP_AQUAE/2-335 PKNDLLLRSLRGEPIGRFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPLKILG..VDAIIIFSDILVPLEPLGVKVEFVEG-EGPK---.-LSWSGKVSDLKKYDP---SQNAYVYEIIKRVKEAQD-EVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQIFDSWV--NNLSLEDYGEYVYPYVNYLI---.SELKDFSDT....................-PVIYFFRGSSSFIDLAVDYR.......-ADALSVDWSVDIPELFKIYDKG-.--FQGNLEPAVLYASEEVIEEKTLGLLRRIP-----VKTRYVFNLGHGLAPDMELEKVKYLVDLVKSF
DCUP_TOBAC/48-389 ATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFR..PDGVILFSDILTPLSGMNIPFDIIKG-KGPVIFD.PLRTAADVEKVREFIP--EKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWA--TELSPVDFEEFSLPYLKQIV---.DSVKLTHPN....................LPLILYASGSGGLLERLPLT-.......GVDVVSLDWTVDMADGRRRLGPNV.A-IQGNVDPGVLFGSKEFITNRINDTVKKAG------KGKHILNLGHGIKVGTPEENFAHFFEIAKGL
DCUP_SYNY3/5-346 NDLPYLLRVARGEVVKRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWQAFQ..PDGVIMFSDILTPLPGIGIPFDIIES-KGPIIDP.PIRTQAQVDQLHALDP--ESSLPFIKTILGTLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKDYKVIKQMAFSEPAILHSFLDKIAEAIAVYVRYQIDCGAQVVQLFDSWA--GQLSPQDYDTFALPYQQKVV---.KLVKEIHPD....................TPLILYISGSAGILERMGKS-.......GVDIVSVDWTVDMADARQRLGKEM.K-VQGNMDPGVLFGSQDFIKERILDTVRKAG------QGGHIFNLGHGVLVGTPEDNVRFFFETAKQV
DCUP_SYNP7/5-346 SSLPRLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQPFRAFK..PDGVILFSDILTPLPGMGIPFDIIES-KGPILEP.PIRTAEQVAAVHDLDP--EEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELLGKLADNIAIYLCHQIDCGAQVVQLFDSWA--GQLSPIDYDTFALPYQQRVF---.QQVKAKHPE....................VPLILYISGSAGVLERMGQS-.......GCDIVSVDWTVDLLDARRRLGPDI.G-LQGNIDPGVLFGSQDFIRDRILDTVRKAG------NQRHILNLGHGILPGTPEDNARHFFETAKNL
DCUP_RHOCA/1-344 MTDKTILRALKGEVLPTPPVWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRRYG..FDAAILFADILLLPQALGLDLWFETG-EGPRMST.-VTSMEGVKGLKGK-DDIHDKLAPVYETCKILSRELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKFKDTDRAAFSALIDAVTVATIEYLSKQVEAGCEVVKLFDSWA--GSLKGQDFEDFAVEPARVIT---.AEMKRRFPG....................LPVIAFPREAGQGYIGFAEKT.......GADCVAIDNSVSPDWAAENVQKGK.TCVQGNLDPSYMVTGGQELVEATKKVVAAFKN------GPHIFNLGHGITPEANPDNVTLLMETIRKG