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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01207 alignment
(18 sequences with 402 aa)


DUSC_HAEIN/4-308 ILA-.......................PMQGVLDPFVRELLTEVNDYD.........................LCITEFVRVVDQLLPEKVFYRLCPELKNQGFTsSGTPVRVQLLGQHPKCLAENAIRAID-L.GSHGIDLNCGCPSKTVNGSNGGAALLKQPELIYRATQALRRAVPS.EFPVSVKVRLGWD--DISQ-AFEIADAVEQGG-ATEITVHGR-------TKADGYRAD.RINWKKISEVRERLS---IPVIANGEIWHW.--QDGQDCLSQTGCQDLMVGRGALNIPNLS--.--HVLK-SNAEKMP--WYE----IQKILQKYANVENEY--DSGFYHVARIKQWLRY--.-LNKE--Y-NEANQVFDKIKT---CQTAE---DLKLRLN
DUSC_ECOLI/4-308 LLA-.......................PMEGVLDSLVRELLTEVNDYD.........................LCITEFVRVVDQLLPVKVFHRICPELQNASRTpSGTLVRVQLLGQFPQWLAENAARAVE-L.GSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPA.HLPVSVKVRLGWD--SGEK-KFEIADAVQQAG-ATELVVHGR-------TKEQGYRAE.HIDWQAIGDIRQRLN---IPVIANGEIWDW.--QSAQQCMAISGCDAVMIGRGALNIPNLS--.--RVVK-YNEPRMP--WPE----VVALLQKYTRLEKQG--DTGLYHVARIKQWLSY--.-LRKE--Y-DEATELFQHVRV---LNNSP---DIARAIQ
DUS_MYCLE/1-346 MLA-.......................PMAGVTNVTFRTLCREFGSTRgnllrpapphlrspleqsqvgtisgLYVCEMVTARALVERNAVTIHMTTFAPDE---.--SPRSLQLYTVDPATTYTAAKMVADEG.LADHIDMNFGCPMPKVTRRGGGAALPYKRRLFGQIVAAAVRATEGtKIPVTVKFRIGID--DEHHTHLDAGRIAEAEG-AAAVALHAR-------TAAQRYSG-.TADWAQIAQLKQQVRT--IPVLGNGDIYDA.--SDALAMMAVTGCDGVVIGRGCLGRPWLFAElS-AAFTGRPAPAPPTLGEV----AEIVRRHGKLLVAHFGEDKGMRDIRKHIAWYLHG-.-FPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAI
DUS1_BACSU/14-323 VLA-.......................PMAGVCNSAFRLTVKEFGAG-.........................LVCAEMVSDKAILYNNARTMGMLYIDERE---.--KPLSLQIFGGKKETLVEAAKFVDQNT.TADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVN-.-KPVTVKMRMGWD--EDHIFAVKNAQAVERAG-GKAVALHGR-------TRVQMYEG-.TANWDIIKEVKQSVS---IPVIGNGDVKTP.--QDAKRMLDETGVDGVMIGRAALGNPWMIYRtVQYLETGKLKEEPQ-VREK----MAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKG-.-VKGNANVRNEINHCETREEF---VQLLD---AFTVEVE
DUSB_HAEIN/13-321 LLA-.......................PMAGITDQPFRRLCAYYGAG-.........................LTFSEMMSTNPQVWHTEKSKLRLAHSEDL---.--GLNAVQIAGSDPLEMAQAAAINVE-Y.GAQIIDINMGCPAKKVNRKLAGSALLQFPDLVEKILREVVSAVN-.-VPVTLKIRTGWD--KSNRNCVQIGKIAEQCG-IQALTVHGR-------TRACLFEG-.EAEYDNIKAVKQAIA---IPVIANGDIDSA.--RKAKFVLNYTGADAIMIGRAALGNPWLFQAvENLIEHNSISQMPS-LKEK----CGQILRHIQELHQFYGEQKGYRIARKHVAWYLQG-.-IQPDSVFKQTFNAISDPKEQ---LIVLE---DFFNLIL
DUSB_ECOLI/13-321 IAA-.......................PMAGITDRPFRTLCYEMGAG-.........................LTVSEMMSSNPQVWESDKSRLRMVHIDEP---.--GIRTVQIAGSDPKEMADAARINVE-S.GAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVD-.-VPVTLKIRTGWA--PEHRNCEEIAQLAEDCG-IQALTIHGR-------TRACLFNG-.EAEYDSIRAVKQKVS---IPVIANGDITDP.--LKARAVLDYTGADALMIGRAAQGRPWIFREiQHYLDTGELLPPLP-LAEV----KRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQE-.-HAPNDQFRRTFNAIEDASEQ---LEALE---AYFENFA
DUS_RHOCA/15-318 LLA-.......................PMAGITDLPFRRMVARFGAG-.........................LVVSEMVASGEMLTAKPSVRAKAQAELTAG--.--LPTSVQLAGREAAPMAEAAKIVAD-M.GAEIIDINMGCPAKKVTGGLSGAALMRNPDHALRLIEAVVGAVD-.-LPVTLKMRLGWD--EDQLNAAEIAARAEAAG-VKMIVIHGR-------TRMQFYTG-.AADWRAIAAVRAAVS---VPVVANGDITDA.--ASARRALDQSGAAGVMVGRGAQGAPWRLAQ.IAAALFGKADPKLPSGSEF----SDFVSEHYEAILSFYGRDLGLRIARKHLGWYAE--.-AAAA-PLRAEMMRATDP------AATL----ALIRSAF
DUS_RHILP/8-311 VLA-.......................PMSGVTDMPFRELAWRFGAG-.........................LVVTEMVASRELVNDTAESWSRLKAAGFR---.---PHMVQLAGREAHWMAEAAKIAAD-H.GADIIDINMGCPAKKVIGGYSGSALMRDPDHALGLIEATVKAVD-.-IPVTLKMRLGWD--ENSINAPDIARRAEASG-IQLVTIHGR-------TRMQFYEG-.RADWDAIRAVREVIS---VPLIANGDVETA.--HDAQEILRRSGADAVMIGRGCQGRPWH---.-AGVLAGAAEPRRE---DI----ADIAVEHYRMMLDFYGEAVAIRHARKHLGWYLERF.APALAGTEKAGIMTSRDPREV---AARLY--HALDAGAL
DUS_AZOBR/15-323 ILA-.......................PMSGVTDLPFRRLVKQSGCG-.........................LVVSEMVASQAMIRENRQTLRMVECEPEQ---.--FPMAVQLAGCEPDVMAEAAKLNED-R.GAAIIDINFGCPVKKVVNGHAGSSLMRDEALAARILEATAKAVT-.-IPVTLKMRKGWD--DSSLNAPRLARIAEECG-IKLVTVHGR-------TREQFYNG-.TADWSFIRSVKEAVS---IPVVVNGDITSF.--DAVDRALAESGADGVMIGRGAYGRPWFPAQvMHYIRTGERLPDPP-LHEQ----LDTLLEHYDAMLTHYGVEGGLRVARKHISWYSTG-.-LRDSAEFRSEVNRMSDPERV---RGFIR---DFYAPAI
DUS1_SYNY3/45-353 LQS-.......................PLSGVTDLVFRRLVRRYAPQA.........................MLYTEMVSATEIHHLRTLPQVMEIDPREN---.---PISIQLFDCRPDFMAEAAQKAVA-Q.GAQSVDINMGCPVNKITKKGGGSSLLRQPAVAEAIVKTVVAAVD-.-VPVTVKTRLGWD--DGEINIVEFAQRLQDAG-AQMLTLHGR-------TRAQGYNG-.RARWQWIAKVKQALT---IPVIANGDIFSV.--EAAIACLEETGADGVMCSRGSLGYPFLVGEiEHFFKTGEKRKAPT-VAEK----LTCAQEHLQMLWEYKG-QRGLFQARKHLAWYCKD-.-FPGAAALREQLFQINSVQEG---KDLLD--QAISTAKL
DUS4_YEAST/41-361 TIAG.......................PMVRYSKLPFRQLCREYNVD-.........................IVYSPMILAREYVRNEHARISDLSTNNED---.--TPLIVQVGVNNVADLLKFVEMVAP--.YCDGIGINCGCPIKEQIREGIGCALIYNSDLLCSMVHAVKDKYG-.-DKLRIETKIRIH--EALDETVELCRKLCDAG-VDWITIHGR-------TRRTRSSQ-.PANLDAIKYIIENISDKNVPVIANGDCFKL.--SDLERITKYTGAHGVMAVRGLLSNPALFAG.YTTCPWGCIEKFCYWALEFGGLPFQLAQHHLYCMLENMELKKSLLKKMMNLKNYISLIdWFNKTFEFKRYGEDGFGMGVEIPYKANS----CVQRSAS
YQI2_CAEEL/7-282 -LA-.......................---------FRQLVRVYDVD-.........................VCFTPMIYAKNFIESEKCRSSELSVCEGD---.--SPLIVQFATDDPFVLSEAAEMVYK--.CSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDpDFSVSLKIRINHD----IEKTVDLCRKAEAAG-VTHLTVHGR-------TPSQRAEP-.-IDIQALRIVKDSVS---VPIIANGGITTR.--EEALFLAEQTGVDGIMAANGLLDNPALFAGhEHTPSD-CVENFMR-LSRE------------------YGLDWLLYHQ--HLQYMLR--.-PVFSAQQRRVFNELNGR--L-----AID---HFLNNLL
DUSA_HAEIN/14-326 SVA-.......................PMLDWTTRHCRYFHRQFSKHA.........................LLYTEMVTAPAIIHA-KYDHLDFDLQENP---.----VALQLGGSDPEQLKYCAKLAEE-R.GYHEINLNVGCPSDRVQNGMFGACLMAKADLVADCVEQMQSAVK-.-IPVTVKTRIGIDELDSYEFLCDFIEKVQGKG-CQEFIIHARKAWLSGLSPKENREIP.PLDYIRVYQLKRDFPH--LTIAINGGIKTI.--EEMKQHLQY--VDGVMVGREAYQNPSLLG-.--QIDQALFDPNAP-IVTA----HEAVESMLPYIEQQLSQGIHLNHIVRHILGAFQN-.-CKGARQWRRYLSENAFKQGA---GIEVV--ETALSFVE
DUS2_SYNY3/14-327 SVA-.......................PMMDHTDRHFRYFLRQLTRHT.........................LLYTEMITAQAILHGDRQRLLNFSPEEKP---.----VALQLGGDDPQLLAECARIGQD-W.GYDEINLNVGCPSDRVQSGNFGACLMAQPDLVAQCVSAMQKAVE-.-IPVTVKHRIGIDHRDSYEDLVHFVEIVANAG-CQRFTVHARKAWLQGLSPKENRTIP.PLRYEDVYQLKKDFPQ--LLIEINGGITQT.--EQIQQHLSH--VDAVMVGRAAYENPYLFA-.--TVDRDIYHKTNL-VPSR----AEIIERMLPYVEERLRHGDRLNQITRHLLSLFNG-.-QPRAKFWRRTLSDSTLLASA---GPELL--QTALQAQK
DUS1_YEAST/31-358 RIVA.......................PMVDQSELAWRILSRRYGAT-.........................LAYTPMLHAKLFATSKKYREDNWSSLDGSS--.VDRPLVVQFCANDPEYLLAAAKLVED--.KCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLIHNLINTLHKNLK-.-VPVTAKIRIFDD----CEKSLNYAKMVLDAG-AQFLTVHGR-------VREQKGQKTgLANWETIKYLRDNLP-KETVFFANGNILYP.--EDISRCMEHIGADAVMSAEGNLYNPGVFNVgQTKNKEKIFPRVDKIIREYFQIVKECQESKASKTAMKSHFFKILRPFLPHHTDIRSTLaTMNAKATWEEWEEQVVKPVEKVVQEIFEQPDIAIKDEIT
DUSC_AZOVI/4-309 ALA-.......................PMEGLVDELLRDLLTRVGGID.........................WCVTEFVRVCDRLLPVAQFEKLAPELRHGWRTrAGTPMHLQLLGSDPACLAENAALAAE-L.GAPAIDLNFGCPAKTSTARGADGCCSTSRNCCMPSSARCAGPCR-.--RCAGDRQDAPG--VRPARGRPGVRRALVEGGVAHLVVHAR-------TKVEGYRP-.PASWEWLARVREAVA---VPVYANRKSGRR.--RIGCREISG--VEDVMLGCGLVSRPDLAR-.--QIAMRAPDARSSRRAGV----RYSRWCASSGGAPGSGSRRATPLAGSSSGWACWR-.-AVIRRRPRCSPNCAGRTTAG-----------GWMPCWA
DUS3_YEAST/272-609 VYLKykdtryfaqekkpldlyhkkivsPLTTVGNLPYRRLMRKLGAD-.........................VTYSEMALAVPLIQGTNSEWALPKAHTSEFP-.---GFGVQVACSKAWQAAKAAEALANSVsEISEINLNSGCPIDLLYRQGSGSALLDNPARMIRCLNAMNYVSKD.-IPITVKIRTGTK--EGHPIAEGLVKRLVNETDVAAITLHGR-------SRQQRYTK-.SADWDYVSQVADTLRSAEADFIETEQGKEG.--RDSKNRIQFVGNGDVNNFEDWYRYLNGNEN.IDSVMVARGALIKPWIFEE-----VESQQYLDKTSTERLDILRDYAQFSMEHWGTD--.-EYGISQCRRFFCEFMSFFHR-----YVP--WVFVKDTL
DUS2_YEAST/31-355 DLV-.......................WSPEIIDKKLIQCVRKENTAL.........................QTVDYVVPSKVQTRPETLVFRTYPKLESS---.---KLIFQIGSASPALATQAALKVIN--.DVSGIDINAGCPKHFSIHSGMGSALLRTPDTLCLILKELVKNVG-.-NPHSKPISVKIRLLDTKQDTLQLVKRLCATG-ITNLTVHCR------KTEMRNREQPiTDYIAEIYEICQANN---VSLIVNGAIRDRsHFHDLQANHWKNTNIGGMIAECAERDPTVFD-.-HTSKPSEDGPSWVVACREFIQWATKFDNHIGNTKYMLSRIVPGKSVFFQYFARCKSP.-EEVSFVLKQLNDDGSAQTDPSEYLENCRAQEKALKNAN