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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01177 phylogeny
for restricted amino acid alignment


 
((((((((((((((((MURI_LACFE/5-220,MURI_PEDPE/5-220),MURI_LACBR/5-221),(((MURI_BACC1/6-221,MURI_BACNA/4-220),(MURI_BACSH/4-219,MURI_STAHA/4-220)),(MURI_CARST/5-220,(MURI_LACLA/5-219,(MURI_STRR6/5-219,MURI_STRPY/5-219))))),(MURI_ANASP/23-236,MURI_SYNY3/8-221)),MURI_NEIMA/9-224),((MURI_CAMJE/2-216,MURI_HELPJ/2-223),(MURI_AQUAE/2-213,MURI_AQUPY/2-213))),MURI_MYCLE/7-221),(Q9S105_ECOLI/11-229,Q9A263_CAUCR/8-248)),((MURI_CLOAB/7-221,MURI2_BACSU/2-218),(MURI_PSEAE/7-222,Q9L4V2_PSYS1/15-235))),((MURI_TREPA/9-226,MURI_BORBU/8-214),((MURI_VIBCH/8-221,((Q9X3Y0_ZYMMO/4-209,(MURI_HAEIN/9-225,MURI_PASMU/8-224)),MURI_BUCAI/1-219)),Q9EX22_STRCO/21-237))),((Q9RBX5_PSEIN/21-255,(((Q987A4_RHILO/20-240,((O58713_PYRHO/7-222,(O58884_PYRHO/7-222,Q9UZP5_PYRAB/7-222)),Q9Y8W4_AERPE/42-257)),(Q9KWI0_SERMA/6-234,(O24766_ALCFA/5-234,Q9WX57_BACST/6-235))),AMDA_BORBR/8-224)),((((HYUE_PSESN/11-215,Q9F466_ARTAU/2-216),Q982Y4_RHILO/13-216),(O74886_SCHPO/3-218,YAKA_SCHPO/3-221)),O58781_PYRHO/8-215))),((O59384_PYRHO/3-225,Q9X5E5_ZYMMO/3-229),((((Q98EV2_RHILO/3-230,Q9A3C6_CAUCR/22-249),YGEA_ECOLI/3-229),(O28850_ARCFU/1-223,Q9RQR2_ZYMMO/3-228)),Q9PJ41_CAMJE/3-228))),Q9A6Q1_CAUCR/4-220),((Q9CDJ4_LACLA/6-232,RACD_STRTR/1-230),RACX_BACSU/4-226)),O58403_PYRHO/3-226),P71164_9CREN/5-227,O93779_9EURY/5-227);
((((((((((((((((MURI_LACFE/5-220:0.58066,MURI_PEDPE/5-220:0.28575):0.08464,MURI_LACBR/5-221:0.34564):0.23309,(((MURI_BACC1/6-221:0.20569,MURI_BACNA/4-220:0.27474):0.04586,(MURI_BACSH/4-219:0.34807,MURI_STAHA/4-220:0.38866):0.12123):0.10503,(MURI_CARST/5-220:0.17958,(MURI_LACLA/5-219:0.23266,(MURI_STRR6/5-219:0.11653,MURI_STRPY/5-219:0.13053):0.12475):0.16473):0.11106):0.07967):0.14835,(MURI_ANASP/23-236:0.19109,MURI_SYNY3/8-221:0.21037):0.41352):0.07689,MURI_NEIMA/9-224:0.48785):0.06742,((MURI_CAMJE/2-216:0.25170,MURI_HELPJ/2-223:0.39180):0.43213,(MURI_AQUAE/2-213:0.10762,MURI_AQUPY/2-213:0.18936):0.21338):0.20651):0.05633,MURI_MYCLE/7-221:0.60007):0.09988,(Q9S105_ECOLI/11-229:0.68372,Q9A263_CAUCR/8-248:0.73729):0.27822):0.10208,((MURI_CLOAB/7-221:0.36831,MURI2_BACSU/2-218:0.60186):0.31315,(MURI_PSEAE/7-222:0.47815,Q9L4V2_PSYS1/15-235:0.61355):0.11644):0.07921):0.12527,((MURI_TREPA/9-226:0.87090,MURI_BORBU/8-214:0.98323):0.19438,((MURI_VIBCH/8-221:0.40063,((Q9X3Y0_ZYMMO/4-209:0.64147,(MURI_HAEIN/9-225:0.24893,MURI_PASMU/8-224:0.17612):0.16036):0.12350,MURI_BUCAI/1-219:0.65830):0.04301):0.21001,Q9EX22_STRCO/21-237:1.10822):0.11054):0.14373):0.33591,((Q9RBX5_PSEIN/21-255:1.18764,(((Q987A4_RHILO/20-240:0.91182,((O58713_PYRHO/7-222:0.36556,(O58884_PYRHO/7-222:0.19804,Q9UZP5_PYRAB/7-222:0.16140):0.23352):0.21284,Q9Y8W4_AERPE/42-257:0.28060):0.21301):0.13544,(Q9KWI0_SERMA/6-234:0.22777,(O24766_ALCFA/5-234:0.21377,Q9WX57_BACST/6-235:0.16514):0.05044):0.75413):0.07062,AMDA_BORBR/8-224:1.15920):0.16474):0.54487,((((HYUE_PSESN/11-215:0.36511,Q9F466_ARTAU/2-216:0.58801):0.24714,Q982Y4_RHILO/13-216:0.55009):0.53111,(O74886_SCHPO/3-218:0.57459,YAKA_SCHPO/3-221:0.80022):0.30537):0.12674,O58781_PYRHO/8-215:0.94644):0.27226):0.14554):0.55444,((O59384_PYRHO/3-225:0.37728,Q9X5E5_ZYMMO/3-229:0.85181):0.26907,((((Q98EV2_RHILO/3-230:0.29721,Q9A3C6_CAUCR/22-249:0.49126):0.15358,YGEA_ECOLI/3-229:0.41136):0.20184,(O28850_ARCFU/1-223:0.37133,Q9RQR2_ZYMMO/3-228:0.49942):0.12948):0.10018,Q9PJ41_CAMJE/3-228:0.39175):0.24226):0.24002):0.23475,Q9A6Q1_CAUCR/4-220:0.87359):0.04847,((Q9CDJ4_LACLA/6-232:0.61689,RACD_STRTR/1-230:0.39589):0.36755,RACX_BACSU/4-226:0.82729):0.22133):0.46303,O58403_PYRHO/3-226:0.18511):0.10784,P71164_9CREN/5-227:0.13912,O93779_9EURY/5-227:0.12355);