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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01168 phylogeny
for restricted amino acid alignment


 
((((((((((ALR2_STAAN/2-224,ALR_CAMJE/1-211),Q9X8T9_STRCO/2-216),((ALR_AQUAE/3-205,ALR_AQUPY/3-205),(((((ALR_HAEIN/5-223,ALR_PASMU/5-223),ALR1_ECOLI/3-220),(((ALR2_ECOLI/4-218,ALR2_KLEAE/4-218),(ALR_NEIMA/3-219,ALR2_PSEAE/3-219)),(ALR1_PSEAE/3-220,(ALR2_SCHPO/3-229,ALR1_SCHPO/3-230)))),((ALR3_RHILO/9-225,ALR1_RHILO/10-226),(ALR_RICPR/3-224,(ALR2_RHILO/24-245,ALR_CAUCR/6-226)))),(((ALR_MYCLE/13-241,ALR_MYCSM/15-243),ALR_STRCO/15-248),(((ALR2_BACSU/7-236,((ALR1_BACSU/9-231,(ALR_BACHD/7-234,ALR_BACPS/9-231)),(((ALR_LACPL/9-236,ALR_LACRE/8-231),((ALR_LACLA/8-229,ALR_STRPY/8-229),ALR_STRPN/8-229)),ALR_LISMO/8-228))),ALR1_STAAU/8-230),((ALR_HELPJ/5-236,ALR1_CLOAB/7-233),((ALR_BORBU/10-234,ALR2_CLOAB/28-254),(VANTG_ENTFA/344-567,VANT_ENTGA/339-562)))))))),((Q99S88_STAAM/1-225,(Q98B74_RHILO/3-230,Q9X1T3_THEMA/3-227)),YHFX_ECOLI/28-265)),((Q983H3_RHILO/9-232,Q9US35_SCHPO/35-246),(Q983R9_RHILO/19-253,Q9HTM9_PSEAE/28-275))),(Q9EUP5_THETH/3-210,Q9PCR1_XYLFA/58-257)),Q9K9U5_BACHD/7-225),Y394_PSEAE/3-225),(Y461_VIBCH/3-232,YPI1_VIBAL/3-232)),Y112_PASMU/2-231,Y090_HAEIN/2-231);
((((((((((ALR2_STAAN/2-224:0.91821,ALR_CAMJE/1-211:1.00180):0.12442,Q9X8T9_STRCO/2-216:1.62113):0.22477,((ALR_AQUAE/3-205:0.19311,ALR_AQUPY/3-205:0.16637):0.60353,(((((ALR_HAEIN/5-223:0.16886,ALR_PASMU/5-223:0.12805):0.28703,ALR1_ECOLI/3-220:0.31130):0.25923,(((ALR2_ECOLI/4-218:0.16423,ALR2_KLEAE/4-218:0.12257):0.46782,(ALR_NEIMA/3-219:0.44282,ALR2_PSEAE/3-219:0.31277):0.11690):0.06983,(ALR1_PSEAE/3-220:0.61377,(ALR2_SCHPO/3-229:0.27272,ALR1_SCHPO/3-230:0.19308):0.45850):0.06768):0.08820):0.28018,((ALR3_RHILO/9-225:0.16155,ALR1_RHILO/10-226:0.23387):0.77327,(ALR_RICPR/3-224:0.53343,(ALR2_RHILO/24-245:0.44352,ALR_CAUCR/6-226:0.51751):0.17739):0.11210):0.28467):0.07589,(((ALR_MYCLE/13-241:0.29127,ALR_MYCSM/15-243:0.20096):0.30091,ALR_STRCO/15-248:0.42913):0.43286,(((ALR2_BACSU/7-236:0.49828,((ALR1_BACSU/9-231:0.42297,(ALR_BACHD/7-234:0.39753,ALR_BACPS/9-231:0.32983):0.09164):0.04702,(((ALR_LACPL/9-236:0.25972,ALR_LACRE/8-231:0.30213):0.26429,((ALR_LACLA/8-229:0.44493,ALR_STRPY/8-229:0.35683):0.06302,ALR_STRPN/8-229:0.35893):0.18384):0.11792,ALR_LISMO/8-228:0.40369):0.13513):0.15457):0.11543,ALR1_STAAU/8-230:0.60222):0.12715,((ALR_HELPJ/5-236:0.62194,ALR1_CLOAB/7-233:0.56096):0.08825,((ALR_BORBU/10-234:0.80649,ALR2_CLOAB/28-254:0.67310):0.15932,(VANTG_ENTFA/344-567:0.63150,VANT_ENTGA/339-562:0.49789):0.22321):0.15737):0.12572):0.15725):0.04500):0.15023):0.13052):0.26125,((Q99S88_STAAM/1-225:0.86133,(Q98B74_RHILO/3-230:0.47317,Q9X1T3_THEMA/3-227:0.69525):0.11246):0.66141,YHFX_ECOLI/28-265:1.24539):0.42313):0.19905,((Q983H3_RHILO/9-232:0.89202,Q9US35_SCHPO/35-246:1.54802):0.25659,(Q983R9_RHILO/19-253:0.71911,Q9HTM9_PSEAE/28-275:0.72469):1.01983):0.43869):0.85130,(Q9EUP5_THETH/3-210:0.58402,Q9PCR1_XYLFA/58-257:0.55417):0.11832):0.08200,Q9K9U5_BACHD/7-225:0.49595):0.35355,Y394_PSEAE/3-225:0.33595):0.12787,(Y461_VIBCH/3-232:0.11488,YPI1_VIBAL/3-232:0.16978):0.16568):0.18253,Y112_PASMU/2-231:0.11347,Y090_HAEIN/2-231:0.14144);