EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01139 - UPF0027)
Uncharacterized protein family UPF0027
(Pfam reference: accession no. PF01139)
(Interpro reference: accession no. IPR001233)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
32 sequences @ 570 aa
(ave. pairwise identity: 0.39)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 16.21)
nucleotides
(available for above)
32 sequences @ 1710 bp
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 13.28)
amino acids, restricted set
(corresp. to available nt seqs)
32 sequences @ 570 aa
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 16.21)