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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01130 alignment
(10 sequences with 594 aa)


YRN3_CAEEL/2-508 VSIKRYEIISFVIAAFFFLSGLSMWI-AFWPIFNSELRSNYKLGANDDGSLHYAAFLYANPPMKNVMKFNLFNVTNPDEVKYLGAKPELIEVGGYAFLE-SEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYN.YNDKIMFPNS-------IAEGAVSTVFGPQSEFSPTAKILV---------.SIGLVMLGEY----.PF--.-ISKTVKDVLMDGYEDPLLSVAHSGIFISLVN--FYGYGSQL-N--YIPEMKTFAYLSGYNN-.SYDENYWINTGYND---------FNKLGFVESWAGLEQLPASFWPTLEARQIKGP--.------DSGSLSKIHLTKTDELPFFLSFMCRSFKRTYW.QDGLVD--GIKTMAFAVPYEEFDTTLEKNAGFRYKNQENVDYFPDW----...-C------DKN-.T--.TTSLSQ----CQKTAN-----GTFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVFHQEKTSGTALQVDVRFQVNLPVVNNKGSIMSSQMPN.VIIPLFYEDSHA.LVKDFVMDTVWLGVIIVPRIIEYLK
Q19140_CAEEL/5-531 IRINKLDVFLVVIAIVFIVFGIVTWA-AFSSIYSTLVIKNLQLTENSDTSLGYSAFQYTSPQVDNIMKFYFFNVTNPDEVKYYSAAPNLVEIGPFSVME-SEQKKYLEFSDDKSQMFYQNYKKYILSKDYSCEDCD.WDRNIVFPNP-------PGLGAVASMLDPQFQITKTGRTII---------.AVALTILGEY----.PF--.-VSHKVREVLFDGYEDALLSAAHSG-FVTVLSGIFKGDGGSI-VPIPIPAMPKFGYFQGYNN-.SRDEEYWIETGKKD---------INQIGNVQRWAGITELPGEWWTTPKARSIRGS--.------DSGSFTQMHLDESSTADMFFSFMCRSFTKTFY.QRETIE--SIPTIGYHIGYDEWDTTSDNNVGFRYRNIEKRNYFPDWPKCPpkgQC------HQSGsIDC.SKSINF----CHACCDGSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVYSPPHFLFSPDEVRTTVVGMAPNKSLHEPMIYYHEPYSGTTLKVVNRLQVNMPVIRSHDVPSSQNMPN.VMIPLFWQDTSP.KYHQFIFNEVWLGFVLVPRLMRVLQ
Q19344_CAEEL/1-517 MRLFVAIILAAVILLVFALGIFLLIP-FPIAIFQSIVDSQVYLQQKSDGQLPTGTFYWSKIPAVQIWTFHLFNVTNPDEVLYYGATPNMLEIGPYTYTE-TEFKDFTQFRDNDNEIFYVNNKTWVYDPTRSCEDCK.LSDSVQFANT------AYMSTVFMQIYQPAG---PIVGFGL---------.DVLTILLGEQ----.PL--.-RTVTAGGTLFDGYNDPLITLINSP-LVKVLL-------SVLGNPVQLPQVPAAGFFPHYSH-.TCDGNYTIRTGKDN---------TDYVGQIKTWNGLTHLP--WWKTEDTSDLRGT--.------CDGTIQKPGIQKTDTVVQFQSFLCRKYNLHYH.ESKTVN--SIPTYGFKVEDDSYDAIKNP--GYRYENFEKVNYFPNWP---...-CGLNHTKQNNG.-NCaLVDCNQYDNFCNACCDGSHVNGTYVMPPGMVPQRCLPGQMVPTPFGAILSAPHFYGAPKVVTESMVGIHPDPELHRPGTFYINPATGSTIGGEFRMMLSIPVFQSLAWTLMSNAPN.AIMPSFTLTIGV.VMKDYAVNYIYFNTVTIPNIVLGLG
Q24336_DROME/14-463 STYLRKWWITIVVAAALIIGGIVVAC-EFTVLIDAVVDRMVALRPGA-----KTFGWWAKPPVEPRISLYIYNVTNADDFLSNGSKAIVDEVGPYVYSE-TWEKVNIVENDNGTLSYNL-RKIYSFREDLSVGPE-.-DDVVIVPNI-------PMLSATSQSKHAAR----FLRLAM---------.ASIMDILKIK----.PF--.-VQVSVGQLLW-GYEDP---------LLKLAK-------DVV-PKEQKLPYEEFGLLYGKNG-.TSSDRVTVNTGVDD---------IRRYGIIDNFNGRTHLP--HWTTDACNTLAG---.------TDGSIFPPHIDHDRILHVYDKDLCRLLPLVFEkEVMTSN--EVPGYRFTTRVGFRRCGQPPGQHVLLS--------RGKPS--...-C------SPNG.---.LFNVSL----CQYDSP------------------------------IMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTLRVRARIQINLAVSQVFDIKQVANFPD.IIFPILWFEEGIdNLPDEVTALMRFAEQVPPKIRVALI
SCRB1_RAT/5-445 SRARWVALGLGVLGLLCAALGVIMIL-MVPSLIKQQVLKNVRIDPSS-----LSFGMWKEIPVPFYLSVYFFEVVNPSEVLN-GQKPVVRERGPYVYRE-FRQKVNITFNDNDTVSYIE-NRSLRFQPDRSQGSE-.-SDYIVLPNI-------LVLGGAVMMEDKPT----SLKLLM---------.TLGLVTMGQR----.AF--.-MNRTVGEILW-GYEDP---------FVNFLS--------KY-FPDMFPIKGKFGLFVGMND-.SSSGVFTVFTGVQN---------FSKIHLVDKWNGLSEVN--YWHSEQCNMING---.------TAGQMWAPFMTPESSLEFFSPEACRSMKLTYQ.ESRVFE--GIPTYRFTAP----DTLFAN--GSVYP--------PNEGFCP...-C------RESG.---.IQNVST----CRFGAP------------------------------LFLSQPHFYNADPVLSEAVLGLNPDPKEHS-LFLDIHPVTGIPMNCSVKMQLSLYIKSVKGVGQTGKIEP.VVLPLLWFEQSG.MMGGKTLNTFYTQLVLMPQVLHYAQ
SCRB1_BOVIN/5-445 SRARRVTAALGFIGLLFAVLGIIMIV-MVPSIIKQQVLKNVRIDPNS-----LSFNMWKEIPVPFYLSVYFFNIVNPEGIIQ-GQKPQVQEHGPYVYRE-FRHKSNITFNNNDTVSFLE-YRSYQFQPDKSRGQE-.-SDYIVMPNI-------LVLSASMMMENRPG----LLKLMM---------.TLAFSTLGQR----.AF--.-MNRTVGEIMW-GYDDP---------LIHLIN--------QY-FPNSLPFKGKFGLFAELNN-.SDSGLFTVFTGVKN---------FSRIHLVDKWNGVSKVN--YWHSDQCNMING---.------TSGQMWAPFMTPESSLEFYSPEACRSMKLVYK.EQGVFG--GIPTFRFVAP----STLFAN--GSVYP--------PNEGFCP...-C------RESG.---.IQNVST----CRFNAP------------------------------LFLSHPHFYNADPVLAEAVSGLHPNPKEHS-LFLDIHPVTGIPMNCSVKLQLSLFVKSVKGIGQTGNIQP.VVLPLMWFEESG.AMEGETLETFYIQLVLMPKVLHYAQ
SCRB2_HUMAN/1-438 GRCCFYTAGTLSLLLLVTSVTLLVAR-VFQKAVDQSIEKKIVLRNGT-----EAFDSWEKPPLPVYTQFYFFNVTNPEEILR-GETPRVEEVGPYTYRE-LRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK.-IDLIRTLNI-------PVLTVIEWSQVHFLR------EII---------.EAMLKAYQQK----.LF--.-VTHTVDELLW-GYKDEILS------LIHVFR-----------P----DISPYFGLFYEKNG-.TNDGDYVFLTGEDS---------YLNFTKIVEWNGKTSLD--WWITDKCNMING---.------TDGDSFHPLITKDEVLYVFPSDFCRSVYITFS.DYESVQ--GLPAFRYKVPAEILANTSDN-AGFCIP---------EGN---...-C------LGSG.---.VLNVSI----CKNGAP------------------------------IIMSFPHFYQADERFVSAIEGMHPNQEDHE-TFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRT.MVFPVMYLNES-.VHIDKETASRLKSMINTTLIITNIP
CRQ_DROME/7-447 GETQRKVWVFG-LGSVFLLLGILIVV-FWPGIADNLVEDGLTLKPGT-----DAYESWLEAPIPIYLSFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLE-KHKKENYTFYDNATVAYYE-RRTWFFDPERSNGTL-.-DDMVTAAHA-------ITATVADEMRDQRK----IVKKII---------.NFMLNHEGGK----.LY--.-VTKPVGEWIFEGYQDNITD------FLNLFN---------T-TKIDIP-YKRFGWLADRNESlTYDGLFTIHTGTDD---------ISNLGRLTHWNGKSETG---FYEMPCGIVNG---.------TTGDMFPPKMNVNDEITIFATDACRFMNL--R.PRGTYENHGLTATKWVGTEETLDSGENYPNQACFC--------DEARFDE...-C------PKTG.---.VVECKA----CRDKAP------------------------------IYSSFPHFYLADQSYVDAVSGMKPEKEKHE-FFLAVEPITGVPVQVHGRIQINMMIEPDDDFDIYRGVQK.VLMPMFWFDQY-.-------AELSSELASKPS-WPLIC
CD36_BOVIN/2-444 CNRNCGLIAGAVIGAVLAVFGGILMP-VGDMLIEKTIKKEVVLEEGT-----IAFKNWVKTGTDVYRQFWIFDVQNPDEVTVNSSKIKVKQRGPYTYRVRYLAKENITQDPETNTVSFLQPNGAIFEPLLSVGTE-.-DDKFTILNL-------AVAAAPQLYPNTFMQG------IL---------.NSFIKKSKSS----.MF--.-QNRTLKELLW-GYTDP---------FLNLVP---------------YPITTTIGVFYPYNN-.TADGIYKVFNGKDD---------ISKVAIIDTYKGRKNLS---YWSSYCDLING---.------TDAASFPPLVEKTRVLQFFSSDICRSIYAVFG.AEINLK--GIPVYRFVLPSFAFASPFENPDNHCFCT-------EKIISKN...-C------TLYG.---.VLDIGK----CKEGKP------------------------------VYISLPHFLHGSPELAEPIEGLSPNEEEHS-TYLDVEPITGFTLRFAKRLQVNTGQARQKKIEALKNLKHnYIVPILWLNETG.TIGDEKAEMFRNQVTGKINLLGLVE
O02351_ANTPO/1-462 MLLPKPLKYAAIGGGVFVFGILIGWV-IFPVILKSQIKKEMALSKKT-----DLRQMWEKVPFALDFKVYIFNYTNVDEIQK-GAKPIVKEIGPYYFEEWKEKVEVEDHEENDTITYKR-LDVFHFRPDLSGPGLT.GEEVIIMPHL-------FILAMVATINREKPS-MLNVVEKS---------.INGIFDNPKD----.VF--.-LRVKAMDIMFRGIIINCDR----TEFAPKAACTKMKKDAVTGVIYEPNNQFRFSLFGTRNNT.VNPDVVTVKRGIKN---------IMDVGQVVALNGKPQID---IWRDHCNEFQG---.------TDGTVFPPFLTYKDRLQSFSFDLCRSFKAWFQ.KKTSYK--GIKTNRYIANVG--DFANDP-ELQCFC---------DTPDE-...-C------LPKG.---.IMDIRK----CLKVPM-------------------------------YVSLPHFLETDTSVTNQVKGLTPDPNEHG-IIADFEPLSGTLMDAKQRMQYNIKLLRTDKIAIFKDLPD.SIVPCFWVHEGI.LLNKTFVKMLKHQLFIPKRIVGVIR