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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01118 phylogeny
for restricted amino acid alignment


 
((((((((((((((Q8CP97_STAEP/3-119,Q726Q8_DESVH/7-122),(((Q891S4_CLOTE/6-123,Q8XJ57_CLOPE/3-120),Q8RBI4_THETN/4-120),((Q7MWN2_PORGI/2-118,Q8A1M5_BACTN/2-118),DHAS_AQUAE/4-120))),(((Q83FL4_TROWT/3-116,(DHAS_MYCSM/3-118,Q6AGY3_LEIXX/8-123)),(Q6AAZ2_PROAC/95-214,(Q9RQ23_AMYMD/6-121,(DHAS_STRAK/2-113,Q9A2S1_CAUCR/12-127)))),DHAS_CORGL/3-121)),Q8GE46_HELMO/5-119),(((((Q87DS3_XYLFT/11-126,DHAS_LEGPN/6-121),((Q7NUD3_CHRVO/6-121,(USG_AZOVI/6-120,(USG_PSEAE/6-120,Q88LE2_PSEPK/6-118))),((DHAS_SHESP/6-121,(DHAS_VIBCH/6-121,(USG_ECOLI/6-121,Q6LNU3_PHOPR/6-121))),Q83D66_COXBU/6-121))),((Q73GJ7_WOLPM/4-120,Q7PBF2_RICSI/6-121),(Q6FYZ2_BARQU/4-119,Q9ABH4_CAUCR/4-119))),(DHAS_CAMJE/6-123,((DHAS_HELPY/5-121,Q7VF05_HELHP/5-122),Q7MAA7_WOLSU/5-122))),(Q8KB62_CHLTE/8-123,Q9X1L1_THEMA/4-120))),(((Q76H90_LACPL/5-120,(DHAS_STRMU/4-119,Q88X86_LACPL/6-121)),(((Q6HIS1_BACHK/7-123,Q71ZN3_LISMF/6-122),DHAS_BACSU/6-121),Q8EQT1_OCEIH/8-123)),(Q8VYI4_ARATH/40-155,Q93Y73_ORYSA/40-156))),(((Q7TV81_PROMM/13-128,(DHAS_PROMA/13-128,Q7TU21_PROMP/13-128)),Q8DMP2_SYNEL/8-123),(Q72L83_THET2/2-116,Q9RSW3_DEIRA/2-116))),Q82EQ4_STRAW/12-127),(((((Q8G6Y8_BIFLO/6-138,(Q97LJ2_CLOAB/6-138,Q97N16_CLOAB/5-137)),((DHAS_METJA/10-138,Q6LXG0_METMP/4-132),((DHAS_LEPIN/5-133,Q6MC73_PARUW/13-137),(DHAS_YEAST/6-132,((DHAS_SCHPO/5-131,Q99103_USTMA/11-137),Q7SF95_NEUCR/8-134))))),((DHAS_METTH/3-128,(DHAS_ARCFU/4-129,Q8PWG9_METMA/5-130)),(Q8TVK0_METKA/5-134,Q9HPX0_HALN1/3-130))),(((Q6KZA0_PICTO/5-131,Q971Y6_SULTO/6-132),(O84368_CHLTR/4-128,(Q822G8_CHLCV/2-126,Q9Z6L1_CHLPN/2-126))),(O58815_PYRHO/2-123,(Q9HL68_THEAC/5-129,Q96YK1_SULTO/9-134)))),(Q8ZUA4_PYRAE/5-130,Q9YCW9_AERPE/2-130))),((((((((Q6M102_METMP/3-141,(ARGC_PYRHO/3-134,Q6KYZ5_PICTO/2-141)),(ARGC_AERPE/6-145,(ARGC_PYRAE/2-142,ARGC2_THET2/5-140))),((ARGC_METMA/6-141,ARGC_ARCFU/2-136),ARGC_METKA/3-144)),((Q6SGL0_9BACT/3-141,((ARGC_CHRVO/3-141,ARGC_NITEU/3-141),ARGC_NEIMA/6-144)),(Q6FCI4_ACIAD/3-141,(ARGC_BORPE/10-148,ARGC_PSESM/3-142)))),((Q72ES7_DESVH/5-146,ARGC_RHOBA/7-146),((((ARGC_AQUAE/6-143,ARGC_WOLSU/5-141),(((ARGC_CLOAB/3-143,ARGC_CAMJE/4-139),ARGC_BACTN/3-124),O82187_ARATH/18-155)),(((ARGC_SYNPX/8-152,(ARGC_PROMP/2-146,ARGC_PROMA/10-154)),(((ARGC_SYNEL/6-145,ARGC_SYNY3/7-146),ARGC_NOSEL/8-147),ARGC_GLOVI/6-145)),((((((ARG56_SCHPO/572-695,(ARG56_YEAST/542-667,Q6FPK4_CANGA/552-677)),Q75AI9_ASHGO/535-660),(Q6BLU1_DEBHA/527-653,Q6CE87_YARLI/541-666)),ARG56_NEUCR/554-681),(ARGC_XYLFT/7-128,ARGC_XANCP/7-128)),(ARGC_THEMA/3-137,(ARGC_THETN/3-141,ARGC_THENE/3-137))))),(ARGC_CHLTE/12-143,(ARGC_STRCO/4-138,ARGC_STRCL/4-137))))),(ARGC_THET2/1-134,(Q748X6_GEOSL/3-141,Q6ANM0_DESPS/3-141))),(((Q6HE28_BACHK/2-141,((ARGC2_LACPL/2-140,Q71Z76_LISMF/2-140),ARGC_OCEIH/3-141)),(ARGC_BACSU/2-141,ARGC_BACHD/2-141)),((((ARGC_BUCAI/3-146,ARGC_BUCAP/3-146),(((ARGC_VIBVU/3-146,Q6LVH0_PHOPR/3-146),ARGC_PASMU/3-147),ARGC_PHOLL/3-146)),ARGC_ECOLI/3-146),(ARGC_MORAB/3-148,ARGC_SHEON/3-147)))),((((ARGC_RHILO/4-105,ARGC_CAUCR/6-107),ARGC_AGRT5/4-106),ARGC_BRUSU/4-109),ARGC_LEPIN/3-140))),(((((((Q6LP18_PHOPR/3-122,Q748X3_GEOSL/2-119),DHAS_NEIMB/2-122),(Q7VRN0_CANBF/3-124,(Q8G8T4_FRATU/3-122,Q8D2B1_WIGBR/3-122))),(DHAS_SALTY/3-123,(DHAS_BUCAI/4-124,DHAS_BUCAP/4-124))),(Q6AJI4_DESPS/7-125,(Q82WI5_NITEU/3-122,(DHAS_BORPE/4-123,O87013_PSEAE/3-122)))),(Q6FEU9_ACIAD/2-122,DHAS_BUCBP/4-124)),Q6SGJ6_9BACT/3-123)),((((((O24832_ACISP/6-121,Q52039_PSEPS/6-121),(Q8KZT1_RHOSR/5-117,P71866_MYCTU/6-119)),(Q739I5_BACC1/5-119,Q9LAF6_BACTR/4-117)),(O85978_SPHAR/5-121,(Q6RES3_9NOCA/4-120,(MHPF_ECOLI/5-123,((Q83V30_PSEFL/8-124,Q51982_PSEPU/9-125),Q8XRG0_RALSO/6-122))))),Q764S1_9BACI/6-119),(Q6D797_ERWCT/9-122,(Q84DI0_9ACTO/8-120,Q99Q18_STRCO/8-123)))),(Q88UA3_LACPL/3-111,Q8YPT5_ANASP/3-112)),Q7BUE1_AMYMD/4-109,Q8GNN1_STRHY/4-108);
((((((((((((((Q8CP97_STAEP/3-119:0.54200,Q726Q8_DESVH/7-122:0.31311):0.06961,(((Q891S4_CLOTE/6-123:0.33445,Q8XJ57_CLOPE/3-120:0.16823):0.07501,Q8RBI4_THETN/4-120:0.24226):0.07182,((Q7MWN2_PORGI/2-118:0.22419,Q8A1M5_BACTN/2-118:0.21132):0.30239,DHAS_AQUAE/4-120:0.13796):0.05303):0.03903):0.00953,(((Q83FL4_TROWT/3-116:0.46773,(DHAS_MYCSM/3-118:0.33961,Q6AGY3_LEIXX/8-123:0.17342):0.07197):0.11629,(Q6AAZ2_PROAC/95-214:0.24703,(Q9RQ23_AMYMD/6-121:0.14807,(DHAS_STRAK/2-113:0.18961,Q9A2S1_CAUCR/12-127:0.21989):0.08781):0.06820):0.05666):0.08250,DHAS_CORGL/3-121:0.30651):0.14988):0.05083,Q8GE46_HELMO/5-119:0.27730):0.03425,(((((Q87DS3_XYLFT/11-126:0.32139,DHAS_LEGPN/6-121:0.29491):0.05643,((Q7NUD3_CHRVO/6-121:0.59696,(USG_AZOVI/6-120:0.33820,(USG_PSEAE/6-120:0.34307,Q88LE2_PSEPK/6-118:0.23987):0.09785):0.24057):0.18213,((DHAS_SHESP/6-121:0.18061,(DHAS_VIBCH/6-121:0.18312,(USG_ECOLI/6-121:0.49058,Q6LNU3_PHOPR/6-121:0.26956):0.14024):0.05589):0.12850,Q83D66_COXBU/6-121:0.31084):0.04257):0.09145):0.07040,((Q73GJ7_WOLPM/4-120:0.41202,Q7PBF2_RICSI/6-121:0.31319):0.15606,(Q6FYZ2_BARQU/4-119:0.55585,Q9ABH4_CAUCR/4-119:0.22918):0.14177):0.10211):0.14858,(DHAS_CAMJE/6-123:0.22144,((DHAS_HELPY/5-121:0.44060,Q7VF05_HELHP/5-122:0.17470):0.13417,Q7MAA7_WOLSU/5-122:0.10277):0.06682):0.18035):0.08047,(Q8KB62_CHLTE/8-123:0.24422,Q9X1L1_THEMA/4-120:0.41930):0.09394):0.08829):0.05576,(((Q76H90_LACPL/5-120:0.12910,(DHAS_STRMU/4-119:0.18255,Q88X86_LACPL/6-121:0.38779):0.10224):0.09299,(((Q6HIS1_BACHK/7-123:0.31323,Q71ZN3_LISMF/6-122:0.15684):0.06001,DHAS_BACSU/6-121:0.18161):0.07596,Q8EQT1_OCEIH/8-123:0.14585):0.08125):0.09348,(Q8VYI4_ARATH/40-155:0.25829,Q93Y73_ORYSA/40-156:0.22849):0.16627):0.03678):0.03770,(((Q7TV81_PROMM/13-128:0.18573,(DHAS_PROMA/13-128:0.13172,Q7TU21_PROMP/13-128:0.39136):0.09866):0.18405,Q8DMP2_SYNEL/8-123:0.34873):0.07352,(Q72L83_THET2/2-116:0.25945,Q9RSW3_DEIRA/2-116:0.21810):0.19558):0.08208):0.24402,Q82EQ4_STRAW/12-127:0.36894):0.38132,(((((Q8G6Y8_BIFLO/6-138:0.13808,(Q97LJ2_CLOAB/6-138:0.21483,Q97N16_CLOAB/5-137:0.33650):0.18018):0.33633,((DHAS_METJA/10-138:0.14190,Q6LXG0_METMP/4-132:0.26941):0.14620,((DHAS_LEPIN/5-133:0.41591,Q6MC73_PARUW/13-137:0.32255):0.15170,(DHAS_YEAST/6-132:0.29446,((DHAS_SCHPO/5-131:0.27983,Q99103_USTMA/11-137:0.53958):0.08157,Q7SF95_NEUCR/8-134:0.26702):0.03945):0.17426):0.09516):0.05529):0.01272,((DHAS_METTH/3-128:0.22842,(DHAS_ARCFU/4-129:0.23074,Q8PWG9_METMA/5-130:0.23355):0.03239):0.04881,(Q8TVK0_METKA/5-134:0.08667,Q9HPX0_HALN1/3-130:0.41037):0.12579):0.07115):0.07949,(((Q6KZA0_PICTO/5-131:0.28957,Q971Y6_SULTO/6-132:0.14026):0.23364,(O84368_CHLTR/4-128:0.22120,(Q822G8_CHLCV/2-126:0.29063,Q9Z6L1_CHLPN/2-126:0.15435):0.11795):0.51614):0.18626,(O58815_PYRHO/2-123:0.46181,(Q9HL68_THEAC/5-129:0.77060,Q96YK1_SULTO/9-134:0.50863):0.13787):0.10689):0.10100):0.08714,(Q8ZUA4_PYRAE/5-130:0.27742,Q9YCW9_AERPE/2-130:0.58106):0.16163):0.23833):0.30197,((((((((Q6M102_METMP/3-141:0.50536,(ARGC_PYRHO/3-134:0.32210,Q6KYZ5_PICTO/2-141:0.49938):0.08883):0.03772,(ARGC_AERPE/6-145:0.51621,(ARGC_PYRAE/2-142:0.43151,ARGC2_THET2/5-140:0.56042):0.05952):0.06240):0.05379,((ARGC_METMA/6-141:0.45892,ARGC_ARCFU/2-136:0.30211):0.12621,ARGC_METKA/3-144:0.37629):0.05644):0.10653,((Q6SGL0_9BACT/3-141:0.30807,((ARGC_CHRVO/3-141:0.12613,ARGC_NITEU/3-141:0.27892):0.08656,ARGC_NEIMA/6-144:0.25685):0.11902):0.06947,(Q6FCI4_ACIAD/3-141:0.30181,(ARGC_BORPE/10-148:0.25243,ARGC_PSESM/3-142:0.21659):0.06259):0.05121):0.20506):0.06728,((Q72ES7_DESVH/5-146:0.50012,ARGC_RHOBA/7-146:0.49578):0.22328,((((ARGC_AQUAE/6-143:0.51408,ARGC_WOLSU/5-141:0.66699):0.16959,(((ARGC_CLOAB/3-143:0.72064,ARGC_CAMJE/4-139:0.39326):0.09260,ARGC_BACTN/3-124:0.71552):0.07189,O82187_ARATH/18-155:0.66561):0.16335):0.07272,(((ARGC_SYNPX/8-152:0.36099,(ARGC_PROMP/2-146:0.42742,ARGC_PROMA/10-154:0.30224):0.19774):0.37770,(((ARGC_SYNEL/6-145:0.22480,ARGC_SYNY3/7-146:0.21725):0.02457,ARGC_NOSEL/8-147:0.25332):0.06873,ARGC_GLOVI/6-145:0.42325):0.09256):0.24817,((((((ARG56_SCHPO/572-695:0.28295,(ARG56_YEAST/542-667:0.12649,Q6FPK4_CANGA/552-677:0.13534):0.12185):0.08554,Q75AI9_ASHGO/535-660:0.25483):0.07051,(Q6BLU1_DEBHA/527-653:0.11664,Q6CE87_YARLI/541-666:0.22393):0.12249):0.12936,ARG56_NEUCR/554-681:0.23499):0.31533,(ARGC_XYLFT/7-128:0.24351,ARGC_XANCP/7-128:0.15519):0.41059):0.45089,(ARGC_THEMA/3-137:0.19916,(ARGC_THETN/3-141:0.41498,ARGC_THENE/3-137:0.20563):0.10208):0.17152):0.15436):0.10276):0.06293,(ARGC_CHLTE/12-143:0.57706,(ARGC_STRCO/4-138:0.20155,ARGC_STRCL/4-137:0.34196):0.42781):0.25363):0.03671):0.07540):0.04712,(ARGC_THET2/1-134:0.49729,(Q748X6_GEOSL/3-141:0.54316,Q6ANM0_DESPS/3-141:0.33383):0.13492):0.07974):0.11478,(((Q6HE28_BACHK/2-141:0.29549,((ARGC2_LACPL/2-140:0.94832,Q71Z76_LISMF/2-140:0.38614):0.13858,ARGC_OCEIH/3-141:0.49427):0.17214):0.09444,(ARGC_BACSU/2-141:0.35768,ARGC_BACHD/2-141:0.30526):0.13981):0.16630,((((ARGC_BUCAI/3-146:0.22927,ARGC_BUCAP/3-146:0.19994):0.43168,(((ARGC_VIBVU/3-146:0.34171,Q6LVH0_PHOPR/3-146:0.16042):0.08186,ARGC_PASMU/3-147:0.28460):0.11645,ARGC_PHOLL/3-146:0.18535):0.08112):0.04115,ARGC_ECOLI/3-146:0.17812):0.15300,(ARGC_MORAB/3-148:0.28853,ARGC_SHEON/3-147:0.59728):0.12206):0.41201):0.09527):0.12222,((((ARGC_RHILO/4-105:0.17173,ARGC_CAUCR/6-107:0.26419):0.18043,ARGC_AGRT5/4-106:0.15984):0.04524,ARGC_BRUSU/4-109:0.20056):1.06242,ARGC_LEPIN/3-140:0.61390):0.20106):0.23579):0.11406,(((((((Q6LP18_PHOPR/3-122:0.26668,Q748X3_GEOSL/2-119:0.39597):0.08944,DHAS_NEIMB/2-122:0.30783):0.04293,(Q7VRN0_CANBF/3-124:0.41114,(Q8G8T4_FRATU/3-122:0.43054,Q8D2B1_WIGBR/3-122:0.59595):0.11279):0.06637):0.07435,(DHAS_SALTY/3-123:0.20763,(DHAS_BUCAI/4-124:0.11206,DHAS_BUCAP/4-124:0.21112):0.19394):0.04219):0.02902,(Q6AJI4_DESPS/7-125:0.31054,(Q82WI5_NITEU/3-122:0.14822,(DHAS_BORPE/4-123:0.18566,O87013_PSEAE/3-122:0.23380):0.09135):0.04951):0.01953):0.19004,(Q6FEU9_ACIAD/2-122:0.33654,DHAS_BUCBP/4-124:0.42657):0.08598):0.63369,Q6SGJ6_9BACT/3-123:1.80334):0.31287):0.20228,((((((O24832_ACISP/6-121:0.24037,Q52039_PSEPS/6-121:0.17133):0.14211,(Q8KZT1_RHOSR/5-117:0.47628,P71866_MYCTU/6-119:0.32189):0.14494):0.19417,(Q739I5_BACC1/5-119:0.33371,Q9LAF6_BACTR/4-117:0.23437):0.16432):0.06285,(O85978_SPHAR/5-121:0.44177,(Q6RES3_9NOCA/4-120:0.29439,(MHPF_ECOLI/5-123:0.25332,((Q83V30_PSEFL/8-124:0.20850,Q51982_PSEPU/9-125:0.23688):0.06784,Q8XRG0_RALSO/6-122:0.17326):0.03080):0.07582):0.05863):0.09654):0.06656,Q764S1_9BACI/6-119:0.31831):0.11669,(Q6D797_ERWCT/9-122:0.57276,(Q84DI0_9ACTO/8-120:0.50446,Q99Q18_STRCO/8-123:0.58606):0.31210):0.09398):0.70257):0.16891,(Q88UA3_LACPL/3-111:0.78433,Q8YPT5_ANASP/3-112:1.01300):0.25787):0.89026,Q7BUE1_AMYMD/4-109:0.19734,Q8GNN1_STRHY/4-108:0.20456);