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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01118 phylogeny
for amino acid alignment


 
((((((((((((((Q8CP97_STAEP/3-119,Q726Q8_DESVH/7-122),(((Q891S4_CLOTE/6-123,Q8XJ57_CLOPE/3-120),Q8RBI4_THETN/4-120),((Q7MWN2_PORGI/2-118,Q8A1M5_BACTN/2-118),DHAS_AQUAE/4-120))),(((Q83FL4_TROWT/3-116,(DHAS_MYCSM/3-118,Q6AGY3_LEIXX/8-123)),(Q9RQ23_AMYMD/6-121,(Q6AAZ2_PROAC/95-214,(DHAS_STRAK/2-113,Q9A2S1_CAUCR/12-127)))),DHAS_CORGL/3-121)),Q8GE46_HELMO/5-119),(((((Q87DS3_XYLFT/11-126,DHAS_LEGPN/6-121),((Q7NUD3_CHRVO/6-121,(USG_AZOVI/6-120,(USG_PSEAE/6-120,Q88LE2_PSEPK/6-118))),((DHAS_SHESP/6-121,(DHAS_VIBCH/6-121,(USG_ECOLI/6-121,Q6LNU3_PHOPR/6-121))),Q83D66_COXBU/6-121))),((Q73GJ7_WOLPM/4-120,Q7PBF2_RICSI/6-121),(Q6FYZ2_BARQU/4-119,Q9ABH4_CAUCR/4-119))),(DHAS_CAMJE/6-123,((DHAS_HELPY/5-121,Q7VF05_HELHP/5-122),Q7MAA7_WOLSU/5-122))),(Q8KB62_CHLTE/8-123,Q9X1L1_THEMA/4-120))),(((Q76H90_LACPL/5-120,(DHAS_STRMU/4-119,Q88X86_LACPL/6-121)),(((Q6HIS1_BACHK/7-123,Q71ZN3_LISMF/6-122),DHAS_BACSU/6-121),Q8EQT1_OCEIH/8-123)),(Q8VYI4_ARATH/40-155,Q93Y73_ORYSA/40-156))),(((Q7TV81_PROMM/13-128,(DHAS_PROMA/13-128,Q7TU21_PROMP/13-128)),Q8DMP2_SYNEL/8-123),(Q72L83_THET2/2-116,Q9RSW3_DEIRA/2-116))),Q82EQ4_STRAW/12-127),((((((DHAS_METTH/3-128,(DHAS_ARCFU/4-129,Q8PWG9_METMA/5-130)),(Q8TVK0_METKA/5-134,Q9HPX0_HALN1/3-130)),(Q8G6Y8_BIFLO/6-138,(Q97LJ2_CLOAB/6-138,Q97N16_CLOAB/5-137))),((DHAS_METJA/10-138,Q6LXG0_METMP/4-132),((DHAS_LEPIN/5-133,Q6MC73_PARUW/13-137),(DHAS_YEAST/6-132,((DHAS_SCHPO/5-131,Q99103_USTMA/11-137),Q7SF95_NEUCR/8-134))))),(((Q6KZA0_PICTO/5-131,Q971Y6_SULTO/6-132),(O84368_CHLTR/4-128,(Q822G8_CHLCV/2-126,Q9Z6L1_CHLPN/2-126))),(O58815_PYRHO/2-123,(Q9HL68_THEAC/5-129,Q96YK1_SULTO/9-134)))),(Q8ZUA4_PYRAE/5-130,Q9YCW9_AERPE/2-130))),(((((ARGC_CLOAB/3-143,ARGC_CAMJE/4-139),(O82187_ARATH/18-155,ARGC_RHOCA/4-141)),((((Q72ES7_DESVH/5-146,ARGC_RHOBA/7-146),((((ARGC_SYNPX/8-152,(ARGC_PROMP/2-146,ARGC_PROMA/10-154)),(((ARGC_SYNEL/6-145,ARGC_SYNY3/7-146),ARGC_NOSEL/8-147),ARGC_GLOVI/6-145)),(ARGC_THEMA/3-137,(ARGC_THETN/3-141,ARGC_THENE/3-137))),((ARGC_AQUAE/6-143,ARGC_WOLSU/5-141),ARGC_BACTN/3-124))),(((Q6SGL0_9BACT/3-141,((ARGC_CHRVO/3-141,ARGC_NITEU/3-141),ARGC_NEIMA/6-144)),(Q6FCI4_ACIAD/3-141,(ARGC_BORPE/10-148,ARGC_PSESM/3-142))),(((Q748X6_GEOSL/3-141,Q6ANM0_DESPS/3-141),ARGC_THET2/1-134),((ARGC_PYRHO/3-134,(ARGC2_THET2/5-140,ARGC1_DEIRA/7-143)),(((ARGC_METMA/6-141,ARGC_AERPE/6-145),((ARGC_METKA/3-144,ARGC_ARCFU/2-136),((ARGC_METJA/3-141,Q6M102_METMP/3-141),ARGC_METTH/3-136))),((Q6KYZ5_PICTO/2-141,ARGC_SULTO/3-142),ARGC_PYRAE/2-142)))))),(ARGC_LEPIN/3-140,(((((ARGC_BUCAI/3-146,ARGC_BUCAP/3-146),(((ARGC_VIBVU/3-146,Q6LVH0_PHOPR/3-146),ARGC_PASMU/3-147),ARGC_PHOLL/3-146)),ARGC_ECOLI/3-146),(ARGC_MORAB/3-148,ARGC_SHEON/3-147)),(((ARGC_BACSU/2-141,ARGC_BACHD/2-141),(Q6HE28_BACHK/2-141,ARGC_STAAS/3-139)),((ARGC2_LACPL/2-140,Q71Z76_LISMF/2-140),ARGC_OCEIH/3-141)))))),(ARGC_CHLTE/12-143,(ARGC_STRCO/4-138,ARGC_STRCL/4-137))),((((((ARG56_SCHPO/572-695,(ARG56_YEAST/542-667,Q6FPK4_CANGA/552-677)),Q75AI9_ASHGO/535-660),(Q6BLU1_DEBHA/527-653,Q6CE87_YARLI/541-666)),ARG56_NEUCR/554-681),(ARGC_XYLFT/7-128,ARGC_XANCP/7-128)),(((ARGC_RHILO/4-105,ARGC_CAUCR/6-107),ARGC_AGRT5/4-106),ARGC_BRUSU/4-109)))),((((Q82WI5_NITEU/3-122,(Q6AJI4_DESPS/7-125,(DHAS_BORPE/4-123,O87013_PSEAE/3-122))),(DHAS_SALTY/3-123,(((DHAS_BUCAI/4-124,DHAS_BUCAP/4-124),(Q8G8T4_FRATU/3-122,Q8D2B1_WIGBR/3-122)),((Q7VRN0_CANBF/3-124,(Q6LP18_PHOPR/3-122,Q748X3_GEOSL/2-119)),DHAS_NEIMB/2-122)))),(Q6FEU9_ACIAD/2-122,DHAS_BUCBP/4-124)),Q6SGJ6_9BACT/3-123)),((((((O24832_ACISP/6-121,Q52039_PSEPS/6-121),(Q8KZT1_RHOSR/5-117,P71866_MYCTU/6-119)),(Q739I5_BACC1/5-119,Q9LAF6_BACTR/4-117)),(O85978_SPHAR/5-121,(Q6RES3_9NOCA/4-120,(MHPF_ECOLI/5-123,((Q83V30_PSEFL/8-124,Q51982_PSEPU/9-125),Q8XRG0_RALSO/6-122))))),Q764S1_9BACI/6-119),(Q6D797_ERWCT/9-122,(Q84DI0_9ACTO/8-120,Q99Q18_STRCO/8-123)))),(Q88UA3_LACPL/3-111,Q8YPT5_ANASP/3-112)),Q7BUE1_AMYMD/4-109,Q8GNN1_STRHY/4-108);
((((((((((((((Q8CP97_STAEP/3-119:0.54154,Q726Q8_DESVH/7-122:0.31278):0.06963,(((Q891S4_CLOTE/6-123:0.33356,Q8XJ57_CLOPE/3-120:0.16865):0.07501,Q8RBI4_THETN/4-120:0.24193):0.07153,((Q7MWN2_PORGI/2-118:0.22414,Q8A1M5_BACTN/2-118:0.21108):0.30342,DHAS_AQUAE/4-120:0.13636):0.05407):0.03961):0.01036,(((Q83FL4_TROWT/3-116:0.47284,(DHAS_MYCSM/3-118:0.34657,Q6AGY3_LEIXX/8-123:0.16063):0.06819):0.10910,(Q9RQ23_AMYMD/6-121:0.16100,(Q6AAZ2_PROAC/95-214:0.24162,(DHAS_STRAK/2-113:0.18424,Q9A2S1_CAUCR/12-127:0.21528):0.08726):0.05289):0.06410):0.09466,DHAS_CORGL/3-121:0.30868):0.14356):0.05042,Q8GE46_HELMO/5-119:0.27854):0.03292,(((((Q87DS3_XYLFT/11-126:0.32149,DHAS_LEGPN/6-121:0.29444):0.05679,((Q7NUD3_CHRVO/6-121:0.59627,(USG_AZOVI/6-120:0.33830,(USG_PSEAE/6-120:0.34247,Q88LE2_PSEPK/6-118:0.23969):0.09725):0.24035):0.18213,((DHAS_SHESP/6-121:0.18002,(DHAS_VIBCH/6-121:0.18271,(USG_ECOLI/6-121:0.49002,Q6LNU3_PHOPR/6-121:0.26922):0.14034):0.05593):0.12811,Q83D66_COXBU/6-121:0.31095):0.04253):0.09117):0.06927,((Q73GJ7_WOLPM/4-120:0.41264,Q7PBF2_RICSI/6-121:0.31213):0.15614,(Q6FYZ2_BARQU/4-119:0.55592,Q9ABH4_CAUCR/4-119:0.22863):0.14182):0.10276):0.14856,(DHAS_CAMJE/6-123:0.22168,((DHAS_HELPY/5-121:0.44040,Q7VF05_HELHP/5-122:0.17429):0.13422,Q7MAA7_WOLSU/5-122:0.10289):0.06601):0.17926):0.08230,(Q8KB62_CHLTE/8-123:0.24266,Q9X1L1_THEMA/4-120:0.42022):0.09488):0.08796):0.05915,(((Q76H90_LACPL/5-120:0.12894,(DHAS_STRMU/4-119:0.18302,Q88X86_LACPL/6-121:0.38576):0.10157):0.09305,(((Q6HIS1_BACHK/7-123:0.31356,Q71ZN3_LISMF/6-122:0.15653):0.06004,DHAS_BACSU/6-121:0.18190):0.07761,Q8EQT1_OCEIH/8-123:0.14336):0.08006):0.09426,(Q8VYI4_ARATH/40-155:0.25553,Q93Y73_ORYSA/40-156:0.23034):0.16478):0.03433):0.03372,(((Q7TV81_PROMM/13-128:0.18759,(DHAS_PROMA/13-128:0.13043,Q7TU21_PROMP/13-128:0.39189):0.09699):0.18744,Q8DMP2_SYNEL/8-123:0.34361):0.07389,(Q72L83_THET2/2-116:0.25826,Q9RSW3_DEIRA/2-116:0.21945):0.19322):0.08779):0.22550,Q82EQ4_STRAW/12-127:0.39217):0.41808,((((((DHAS_METTH/3-128:0.23017,(DHAS_ARCFU/4-129:0.23293,Q8PWG9_METMA/5-130:0.23132):0.03133):0.04752,(Q8TVK0_METKA/5-134:0.08640,Q9HPX0_HALN1/3-130:0.40896):0.12605):0.07175,(Q8G6Y8_BIFLO/6-138:0.13882,(Q97LJ2_CLOAB/6-138:0.21590,Q97N16_CLOAB/5-137:0.33510):0.17787):0.33430):0.01902,((DHAS_METJA/10-138:0.14511,Q6LXG0_METMP/4-132:0.26600):0.14194,((DHAS_LEPIN/5-133:0.41747,Q6MC73_PARUW/13-137:0.32184):0.15415,(DHAS_YEAST/6-132:0.29506,((DHAS_SCHPO/5-131:0.28011,Q99103_USTMA/11-137:0.53840):0.08036,Q7SF95_NEUCR/8-134:0.26773):0.03947):0.17134):0.09599):0.04858):0.07644,(((Q6KZA0_PICTO/5-131:0.28900,Q971Y6_SULTO/6-132:0.13926):0.22780,(O84368_CHLTR/4-128:0.22404,(Q822G8_CHLCV/2-126:0.28955,Q9Z6L1_CHLPN/2-126:0.15499):0.11470):0.52786):0.18160,(O58815_PYRHO/2-123:0.45666,(Q9HL68_THEAC/5-129:0.76648,Q96YK1_SULTO/9-134:0.50981):0.14573):0.11026):0.09743):0.07887,(Q8ZUA4_PYRAE/5-130:0.26793,Q9YCW9_AERPE/2-130:0.58734):0.17786):0.22360):0.20866,(((((ARGC_CLOAB/3-143:0.74578,ARGC_CAMJE/4-139:0.39219):0.21876,(O82187_ARATH/18-155:0.31974,ARGC_RHOCA/4-141:0.25510):0.37281):0.07865,((((Q72ES7_DESVH/5-146:0.47158,ARGC_RHOBA/7-146:0.52835):0.22544,((((ARGC_SYNPX/8-152:0.35937,(ARGC_PROMP/2-146:0.42971,ARGC_PROMA/10-154:0.29802):0.20118):0.37101,(((ARGC_SYNEL/6-145:0.22668,ARGC_SYNY3/7-146:0.21509):0.02592,ARGC_NOSEL/8-147:0.25288):0.06719,ARGC_GLOVI/6-145:0.42545):0.08747):0.26218,(ARGC_THEMA/3-137:0.20458,(ARGC_THETN/3-141:0.42769,ARGC_THENE/3-137:0.19831):0.10360):0.29674):0.11746,((ARGC_AQUAE/6-143:0.49775,ARGC_WOLSU/5-141:0.67963):0.13442,ARGC_BACTN/3-124:0.84882):0.10862):0.01103):0.08710,(((Q6SGL0_9BACT/3-141:0.31208,((ARGC_CHRVO/3-141:0.12230,ARGC_NITEU/3-141:0.28283):0.08253,ARGC_NEIMA/6-144:0.25735):0.11194):0.06905,(Q6FCI4_ACIAD/3-141:0.30169,(ARGC_BORPE/10-148:0.25448,ARGC_PSESM/3-142:0.21275):0.06389):0.04696):0.20415,(((Q748X6_GEOSL/3-141:0.55189,Q6ANM0_DESPS/3-141:0.33333):0.13107,ARGC_THET2/1-134:0.47879):0.07114,((ARGC_PYRHO/3-134:0.35464,(ARGC2_THET2/5-140:0.30628,ARGC1_DEIRA/7-143:0.26454):0.26293):0.11134,(((ARGC_METMA/6-141:0.43516,ARGC_AERPE/6-145:0.52999):0.12093,((ARGC_METKA/3-144:0.37035,ARGC_ARCFU/2-136:0.33869):0.06044,((ARGC_METJA/3-141:0.36034,Q6M102_METMP/3-141:0.32444):0.10821,ARGC_METTH/3-136:0.23364):0.10371):0.05257):0.08450,((Q6KYZ5_PICTO/2-141:0.47864,ARGC_SULTO/3-142:0.36742):0.10577,ARGC_PYRAE/2-142:0.42881):0.10521):0.02213):0.09196):0.06363):0.06984):0.05555,(ARGC_LEPIN/3-140:0.89446,(((((ARGC_BUCAI/3-146:0.22881,ARGC_BUCAP/3-146:0.20000):0.42964,(((ARGC_VIBVU/3-146:0.34011,Q6LVH0_PHOPR/3-146:0.16178):0.08114,ARGC_PASMU/3-147:0.28544):0.11520,ARGC_PHOLL/3-146:0.18584):0.08282):0.03992,ARGC_ECOLI/3-146:0.17840):0.13831,(ARGC_MORAB/3-148:0.30051,ARGC_SHEON/3-147:0.58735):0.13899):0.40186,(((ARGC_BACSU/2-141:0.35487,ARGC_BACHD/2-141:0.31304):0.13813,(Q6HE28_BACHK/2-141:0.26960,ARGC_STAAS/3-139:0.76899):0.07303):0.10604,((ARGC2_LACPL/2-140:0.96308,Q71Z76_LISMF/2-140:0.38884):0.14116,ARGC_OCEIH/3-141:0.51533):0.12736):0.15011):0.13613):0.08352):0.04301):0.04842,(ARGC_CHLTE/12-143:0.59743,(ARGC_STRCO/4-138:0.20579,ARGC_STRCL/4-137:0.34084):0.38800):0.19159):0.21577,((((((ARG56_SCHPO/572-695:0.27612,(ARG56_YEAST/542-667:0.12741,Q6FPK4_CANGA/552-677:0.13505):0.12765):0.08142,Q75AI9_ASHGO/535-660:0.25952):0.07233,(Q6BLU1_DEBHA/527-653:0.11433,Q6CE87_YARLI/541-666:0.22625):0.12201):0.09993,ARG56_NEUCR/554-681:0.27383):0.31166,(ARGC_XYLFT/7-128:0.27191,ARGC_XANCP/7-128:0.12674):0.38586):0.19544,(((ARGC_RHILO/4-105:0.18524,ARGC_CAUCR/6-107:0.25251):0.18032,ARGC_AGRT5/4-106:0.15304):0.10017,ARGC_BRUSU/4-109:0.14560):0.99287):0.20955):0.29231):0.18727,((((Q82WI5_NITEU/3-122:0.16873,(Q6AJI4_DESPS/7-125:0.27386,(DHAS_BORPE/4-123:0.19616,O87013_PSEAE/3-122:0.21522):0.08620):0.05619):0.03941,(DHAS_SALTY/3-123:0.22729,(((DHAS_BUCAI/4-124:0.12219,DHAS_BUCAP/4-124:0.19775):0.12184,(Q8G8T4_FRATU/3-122:0.45065,Q8D2B1_WIGBR/3-122:0.58449):0.07925):0.10489,((Q7VRN0_CANBF/3-124:0.44241,(Q6LP18_PHOPR/3-122:0.27611,Q748X3_GEOSL/2-119:0.38226):0.07286):0.04001,DHAS_NEIMB/2-122:0.31752):0.08159):0.05630):0.00000):0.18857,(Q6FEU9_ACIAD/2-122:0.36189,DHAS_BUCBP/4-124:0.40032):0.08314):0.64103,Q6SGJ6_9BACT/3-123:1.85077):0.38810):0.16512,((((((O24832_ACISP/6-121:0.23990,Q52039_PSEPS/6-121:0.17179):0.14168,(Q8KZT1_RHOSR/5-117:0.47594,P71866_MYCTU/6-119:0.32148):0.14565):0.19606,(Q739I5_BACC1/5-119:0.33108,Q9LAF6_BACTR/4-117:0.23731):0.16283):0.05824,(O85978_SPHAR/5-121:0.43895,(Q6RES3_9NOCA/4-120:0.29321,(MHPF_ECOLI/5-123:0.25264,((Q83V30_PSEFL/8-124:0.20865,Q51982_PSEPU/9-125:0.23653):0.06828,Q8XRG0_RALSO/6-122:0.17300):0.03076):0.07726):0.06024):0.10032):0.05514,Q764S1_9BACI/6-119:0.33059):0.12834,(Q6D797_ERWCT/9-122:0.56617,(Q84DI0_9ACTO/8-120:0.48650,Q99Q18_STRCO/8-123:0.60143):0.31715):0.08926):0.66832):0.23085,(Q88UA3_LACPL/3-111:0.76020,Q8YPT5_ANASP/3-112:1.04360):0.26636):0.88841,Q7BUE1_AMYMD/4-109:0.20347,Q8GNN1_STRHY/4-108:0.19740);