EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01109 - GM_CSF)
Granulocyte-macrophage colony-stimulating factor
(Pfam reference: accession no. PF01109)
(Interpro reference: accession no. IPR000773)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 126 aa
(ave. pairwise identity: 0.67)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.69)
nucleotides
(available for above)
7 sequences @ 378 bp
(ave. pairwise identity: 0.76)
New Hampshire format
(total tree length: 0.94)
amino acids, restricted set
(corresp. to available nt seqs)
7 sequences @ 126 aa
(ave. pairwise identity: 0.67)
New Hampshire format
(total tree length: 1.69)