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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01085 - HH_signal)
Hedgehog amino-terminal signaling domain
(Pfam reference: accession no. PF01085)
(Interpro reference: accession no. IPR000320)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 163 aa
(ave. pairwise identity: 0.71)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.80)
nucleotides
(available for above)
3 sequences @ 489 bp
(ave. pairwise identity: 0.68)
New Hampshire format
(total tree length: 0.66)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 163 aa
(ave. pairwise identity: 0.77)
New Hampshire format
(total tree length: 0.46)