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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01076 alignment
(18 sequences with 234 aa)


P71098_BACTI/20-220 HNNREMNEKEKER-NSHIDQSRSHENKYLVQK...DVKDLYEKEFGEVLEKYNA.KQKRNDRKIDDYYKHIQ----SSKKTSLQQEMIVQVGDMKDFN-YRADYEKANEILLDWFKDFEKRNPN.LKVYNAVIHNDEA.........--SPHMHLNFVPVASGYKRGLEKQ-.-.-VSFDRAITQQDATLDKTRPFDDWREKEVQLLEKALKERGI----.-ERKLVGTNEYKD
P71520_MARHA/20-221 HNNREFTERGKER-NDHIDFSKSDRNVYLVKN...DLRELYEREFGAAKDRYND.KQQRRDRKIDDYYKHVQ----QGKKTRPQQEMIVQIGEQDQFQDNEPNREMAKEVLQEWFQEFQQRNPQ.LKMYNAVIHDDEA.........--SPHMHMNFVPVATGYKKGMDTQ-.-.-VSFDRAIKQQDATLNQTHPFEDWREREIGFLEEKINARGI----.-DRELVGTNDYED
O05418_CLOPE/6-219 KADMSCARVKKYT-ASDVSKAERHNERKNETY...ENMNVIEERIPYNVHFKKP.FAPTYMEQLKQMETDGMVSL-RGLRKDATLFNEIVIDVNTMYFERNGGYEYAKQFYEEAFHFIEEKFGA.DNVISAVMHADEInvaateelgKEVYHYHLH-----AMVLPVVEKEIlWsKRCKDEKLRGTVKEVVHQIS----HSKKWKSDIPLTDEKGNP---.LLRKNGKPMFRAS
Q09026_OENOE/1-199 -MYKLVLHVKHFK-KGNLSKLENHNSRRYLHD...NNKNIRPELSKNNIQFIDH.-KGTLTQDVKARTDQRLNNK-RAIRSDANLISEIVVGADDKYF-QTLTDQKKIDFGRTATKLIQERYGK.ENVLRSYLHLDEV.........DDNGIQHPGLHVD---LVPMTKNG-.-.-KLSSDALWD-RKELFDFHT----YMAKGLQANGFQLERGEEY--.SRTKHLDPNVYKA
Q52050_BUTFI/1-198 MG-YGIMRCEKRK-IQACGGIQAENNRQADKQkdfKASDIDWDRTNENEFLIQS.--MNLQQDIKKELKEHG---IDKWRKDAVVCIDGLYTASPEFF-EGKTKEECMEYFKDCLEYHEKTYG-.-VTINAVIHFDEA.........--TPHMHCQSVP----LVEREDGSF.-.-KLCAKELMGNIKQYHQRQN----EFHEEVGLK-YGLERGQVQDReERREHLDTLEFKT
PRE_STRAG/1-194 MS-YMVARMQKMK-AGNLGGAFKHNERVFETH...SNKDINPSRSHLNYELTDRdRSVSYEKQIKDYVNENKVSN-RAIRKDAVLCDEWIITSDKDFF-EKLDEEQTRTFFETAKNYFAENYGE.SNIAYASVHLDES.........--TPHMHMG-------VVPFENG--.-.-KLSSKAMFD-REELKHIQE----DLPRYMSDHGFELERGKLN--.SEAKHKTVAEFKR
Q48524_LACCA/1-194 MS-YLVANMQKLK-ADNLVGLGNHDQRRTQHH...KNPDIDVDRSALNYDLVAG.RTGHFKTDIEAYINEHKTSQ-RAVRKDAVLVNEWIISSDSHFF-ADLTAADMRKYFETAKDYFAEKFGE.ENIRYAIVHLDES.........--TPHMHMG-------IVPFDDEH-.-.-KLSAKRVFN-RTALRDVQD----QLPAYLPQHGLNIQRGVQE--.SGRKSLAVPGYKA
PREA_LACPL/1-194 MS-FAVARMTKLK-ADNLVGIGNHDQRKTTNH...SNEDIDVSRSHLNYDLVAG.RTDNFKTDIEAYINENKASK-RAVRKDAVLVNEWIITSDKDFF-EQLDEAETRKYFETAKQYFADNYGD.ENIRYAVVHMDEK.........--TPHMHMG-------IVPFDDDK-.-.-KLSAKRIFN-REALQHIQE----ELPQYLKENGFDVQRGNKN--.KERKNLSVPEYKA
O32791_9LACT/1-193 MS-FAVARMQKVK-SGNLVGVGNHNQRNTDNH...SNKDIDVERSHLNYDLVN-.RTENYKRDIEQFINDNKSSS-RAVRKDAVLINEWIITSDNPFF-KDKDDKEIKDFFDTAKSYFADKFGD.NNIRYAQVHLDET.........--TPHMHLG-------IVPFNDEH-.-.-KLSAKTVFN-RQALQAVQD----ELPKYLNERGFELERGEKG--.SERKNLTVPEYKK
O87277_9STAP/1-193 MS-YAVCRMQKVK-SAGLKGMQFHNQRERKSR...TNDDIDHERTRENYDLKND.KNIDYNERVKEIIESQKTGT-RKTRKDAVLVNELLVTSDRDFF-EQLDPGEQKRFFEESYKLFSERYGK.QNIAYATVHNDEQ.........--TPHMHLG-------VVPMRDG--.-.-KLQGKNVFN-RQELLWLQD----KFPEHMKKQGFELKRGERG--.SDRKHIETAKFKK
PREA_BACTU/1-192 MNKFAIIHMQKFQ-ISDVQGIQKHNQRQGKSK...SNLDIDYSKSEQNYDLLNQ.QKIRYESTIKQEISERV--K-RKPRANSVVLSEFVVTASPDYM-HSLSLEEQKRYFESSLDFIQKRYGK.QNTLYAMVHMDEA.........--TPHMHIG-------VMPITEDN-.-.-RLSAKDMFT-RKELISLQQ----DFPLEMREKGFDVDRGEG---.SEKKHLSPQAFKE
Q45448_BACSU/1-193 MANYAVIRMEKYK-KDRLNGTQKHNQREFQKS...KNENIDRERTHLNYDLVNE.KPISYSKAIHEKIEGRV--K-RKVRADAVLVSEFLITASPDYM-NGLSDEEQRRYFETAVDHLKEKYSA.ENMLYATVHMDEA.........--TPHMHVG-------IVPITEDG-.-.-RLSAKDFFNGKLKMKAIQD----DFHRHMVENGFDLVRGEP---.SEKKHENVHQYKI
Q53620_STAAU/1-198 MS-YSIVRVSKVKSGTNTTGIQKHVQRENNNY...ENEDIDHSKTYLNYDLVNA.NKQNFNNLIDEKIEQNYTGK-RKIRTDAIKHIDGLITSDNDFF-DNQTPEDTKQFFEYAKEFLEQEYGK.DNLLYATVHMDEK.........--TPHMHYG-------VVPITDDG-.-.-RLSAKEVVGNKKALTAFQD----RFNEHVKQRGYDLERGQSRQV.TNAKHEQISQYKQ
Q53618_STAAU/1-198 MA-YSIIRVAKVKSKTNTKGIQKHVQRQNKNY...ENMDIDLEKSYLNYDLVND.SPIDYNQKIEEKIEQNYNGK-RKIRKDAVKHIDGLITSGNEFS-KNQTLEETKQFFEHAKTFLEQEYGK.DNLLYATVHMDEK.........--TPHMHYG-------VVPITEDG-.-.-RLSAKEVLGNKKALTEFQD----RFNEHINSCGYDLSRGITRGV.TPRRHEQISRYKN
PRE1_STAAU/1-198 MS-HSILRVARVKGSSNTNGIQRHNQRENKNY...NNKDINHEETYKNYDLINA.QNIKYKDKIDETIDENYSGK-RKIRSDAIRHVDGLVTSDKDFF-DDLSGEEIERFFKDSLEFLENEYGK.ENMLYATVHLDER.........--VPHMHFG-------FVPLTEDG-.-.-RLSAKEQLGNKKDFTQLQD----RFNEYVNEKGYELERGTSKEV.TEREHKAMDQYKK
65KD_ZYMMO/1-192 MPNYAIFRFEKHKTVGTIKAASLHMTRGRET-...--QNADPDRKELNEILKG-.-STDPSADVKSMLNKIQKETGKPLRKNGVQAIELFFGMSPEWS-KQATPEKLEHWKTITQQWAEQTFGE.NNLVSLQLHADET.........--TPHLTGF-------MVPRDPDTG.-.-RLNASRWFDGRKALSALQT----DYAASMEPLG--LARGVKG--.SKATHQRVQRHYG
O54530_ECOLI/1-186 MAAYAIMRCKKLAKMGNVAASLKHAYRERET-...--PNADASRTPENEHWAAS.STDEAMGRLRELLPEKR----RK---DAVLAVEYVMTASPEWW-KSASQEQQAAFFEKAHKWLADKYGA.DRIVTASIHRDET.........--SPHMTAF-------VVPLTQDG-.-.-RLSAKEFIGNKAQMTRDQT----TFAAAVADLG--LQRGIEG--.SKARHTRIQAFYE
Q52058_9ZZZZ/3-190 SNNFCILRFQKIKSAIAVRRRLKHNSRINQP-...--ENANPEKSNLNQYFNS-.----YDEALEIYKKQLP----EKVRKNAVHAVEILITASPEIL-SKMTFQEQKNYFNQSLAWAENQLGGrEILLSACIHRDEA.........--TPHLHMI-------FMPLKEKK-.-.-LNANYYIGGSKHKMIELQD----DFYKNVGQK-FKMDRGRPAAI.TKAKHLNSRDYLA