EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01076 alignment
(18 sequences with 702 bp)


P71098_BACTI/20-220 CACAATAATCGGGAAATGAATGAGAAGGAAAAAGAGCGG---AATTCTCATATTGATCAATCCCGTTCTCATGAAAATAAATATCTTGTTCAAAAA.........GATGTAAAGGACTTGTATGAAAAAGAATTTGGAGAAGTTTTGGAGAAATATAATGCC...AAACAAAAACGAAATGATCGAAAAATTGATGATTATTACAAACACATTCAA------------TCTAGTAAAAAGACTTCACTCCAGCAAGAAATGATTGTGCAAGTTGGTGATATGAAAGATTTTAAT---TATCGTGCTGATTATGAAAAAGCGAATGAAATTTTATTGGATTGGTTCAAGGATTTTGAAAAAAGAAATCCTAAT...TTGAAAGTTTATAATGCGGTTATTCACAATGATGAGGCA...........................------AGTCCTCATATGCACTTGAATTTTGTGCCTGTGGCAAGTGGCTATAAGCGAGGACTTGAAAAGCAA---...---...---GTGTCGTTTGATCGGGCTATTACGCAACAAGATGCAACACTAGATAAAACTCGTCCCTTTGATGATTGGCGAGAAAAAGAAGTTCAGTTGTTAGAAAAAGCATTAAAAGAGCGTGGTATT------------...---GAACGGAAATTAGTTGGCACAAATGAGTATAAAGAT
P71520_MARHA/20-221 CATAATAATCGGGAGTTCACGGAACGAGGAAAAGAACGA---AATGACCACATTGATTTCTCGAAATCGGATCGGAATGTCTACCTGGTAAAGAAT.........GATCTCCGGGAATTATATGAGCGAGAGTTTGGAGCAGCGAAAGATCGATACAATGAT...AAGCAGCAACGTCGGGACCGAAAAATTGACGATTACTATAAGCATGTACAG------------CAAGGAAAAAAGACGAGACCCCAACAAGAAATGATTGTGCAGATCGGAGAACAGGATCAGTTCCAGGACAATGAGCCCAACCGGGAAATGGCGAAAGAGGTTCTTCAGGAATGGTTCCAGGAGTTCCAGCAACGGAATCCCCAA...CTGAAAATGTACAATGCGGTGATTCATGATGATGAAGCA...........................------AGCCCGCATATGCATATGAACTTTGTGCCCGTGGCCACAGGATATAAAAAAGGGATGGATACGCAG---...---...---GTGTCGTTTGACCGGGCGATCAAGCAGCAAGACGCAACGTTGAATCAGACGCACCCTTTTGAAGACTGGCGGGAACGAGAGATTGGATTTTTAGAAGAAAAGATCAATGCCCGGGGGATT------------...---GATCGGGAGCTCGTGGGAACGAATGACTATGAGGAC
O05418_CLOPE/6-219 AAGGCGGATATGAGTTGTGCAAGGGTTAAAAAGTACACC---GCTTCTGATGTGAGCAAGGCAGAAAGGCACAACGAACGCAAGAATGAAACCTAT.........GAAAATATGAATGTGATTGAGGAACGCATACCCTATAATGTGCATTTCAAAAAGCCT...TTTGCCCCGACCTATATGGAACAATTAAAGCAGATGGAAACTGACGGTATGGTGTCGCTT---CGAGGGCTGAGGAAAGACGCAACGCTGTTCAATGAGATTGTGATTGATGTGAACACAATGTACTTCGAGCGTAACGGCGGCTACGAATATGCAAAGCAGTTTTACGAAGAAGCATTCCATTTTATCGAGGAAAAATTCGGTGCT...GATAATGTCATATCGGCTGTTATGCACGCTGATGAAATCaatgtagcggcaaccgaggaacttggaAAAGAGGTTTACCACTATCATCTTCAC---------------GCTATGGTTTTGCCTGTGGTGGAGAAAGAAATCctaTGGagcAAGCGTTGCAAAGATGAAAAACTGCGAGGAACGGTTAAGGAAGTTGTTCATCAAATCAGC------------CATTCAAAGAAATGGAAATCGGATATTCCGCTGACCGACGAAAAAGGCAATCCG---------...CTTCTCAGAAAGAACGGAAAACCGATGTTCCGAGCTTCA
Q09026_OENOE/1-199 ---ATGTACAAATTAGTTTTGCATGTTAAACATTTTAAA---AAAGGTAATTTATCAAAGCTCGAAAATCATAATTCAAGAAGATATTTGCACGAT.........AACAACAAAAATATACGTCCTGAATTATCAAAGAATAATATTCAATTTATTGATCAT...---AAGGGTACTCTTACTCAAGATGTAAAAGCGAGAACTGATCAAAGATTAAATAATAAA---AGGGCTATTAGAAGTGATGCTAATTTAATCTCAGAAATTGTAGTAGGAGCTGATGATAAGTATTTT---CAGACACTAACCGATCAAAAGAAAATAGATTTTGGTAGGACTGCTACAAAATTAATCCAGGAAAGATATGGCAAA...GAAAATGTATTGCGTTCTTATTTACACCTGGACGAAGTT...........................GACGATAATGGTATCCAGCACCCTGGTCTACATGTTGAT---------TTAGTGCCTATGACTAAAAATGGA---...---...---AAACTTAGTAGTGATGCCCTTTGGGAT---AGAAAAGAGCTTTTTGATTTTCATACT------------TACATGGCTAAGGGACTACAAGCTAATGGTTTCCAATTGGAACGTGGAGAAGAGTAC------...AGTAGGACCAAACATCTTGACCCTAATGTTTATAAGGCG
Q52050_BUTFI/1-198 ATGGGA---TATGGAATAATGCGCTGTGAGAAGCGTAAA---ATACAGGCTTGCGGGGGCATACAAGCTGAGAATAACAGGCAAGCCGACAAACAGaaggattttAAGGCAAGTGATATTGATTGGGATAGAACGAATGAAAATGAGTTCTTGATACAATCA...------ATGAACTTGCAGCAGGACATCAAGAAAGAACTCAAGGAGCACGGT---------ATTGATAAATGGCGTAAGGACGCAGTAGTCTGCATAGATGGGCTATATACAGCCTCTCCTGAGTTCTTT---GAAGGCAAGACCAAAGAAGAGTGTATGGAGTACTTCAAGGATTGCCTTGAATACCACGAAAAGACCTATGGT---...---GTCACAATCAATGCGGTAATTCACTTTGATGAGGCT...........................------ACCCCACATATGCACTGCCAGAGCGTGCCT------------CTGGTAGAACGTGAAGACGGTTCTTTC...---...---AAGCTGTGTGCTAAAGAGCTAATGGGAAATATCAAACAGTATCATCAAAGGCAGAAT------------GAGTTCCACGAGGAAGTTGGCTTGAAA---TATGGACTCGAACGAGGACAGGTTCAAGACAGAgagGAACGTAGGGAACACCTTGATACTTTGGAGTTCAAAACC
PRE_STRAG/1-194 ATGAGT---TACATGGTTGCAAGAATGCAGAAGATGAAA---GCTGGCAATTTGGGAGGAGCTTTTAAGCATAATGAACGTGTTTTTGAGACGCAC.........TCAAATAAAGATATAAACCCGAGCAGGTCACACCTCAACTACGAGTTGACGGATCGTgacCGCTCGGTGTCGTATGAAAAGCAGATTAAAGACTATGTGAACGAAAATAAGGTTTCTAAT---CGAGCAATCCGAAAAGATGCAGTTCTATGTGATGAGTGGATTATCACATCTGATAAAGATTTTTTT---GAAAAGTTGGATGAGGAACAGACGAGAACGTTTTTTGAAACGGCTAAAAATTATTTTGCAGAGAACTATGGCGAG...TCAAATATTGCTTATGCGAGTGTTCACTTGGATGAAAGC...........................------ACCCCTCACATGCACATGGGA---------------------GTAGTACCTTTTGAGAACGGT------...---...---AAATTGTCATCAAAAGCAATGTTTGAC---CGTGAGGAGCTAAAACATATCCAAGAG------------GACTTGCCTAGATACATGAGCGACCACGGTTTTGAGTTGGAACGTGGCAAGCTGAAT------...AGTGAAGCTAAGCATAAGACTGTAGCTGAATTCAAGAGG
Q48524_LACCA/1-194 ATGAGT---TATTTAGTCGCTAATATGCAGAAATTGAAA---GCTGATAATCTGGTGGGCTTGGGTAATCATGATCAACGGCGAACCCAACATCAC.........AAAAATCCGGATATTGACGTTGACCGTTCTGCTTTAAATTATGATTTAGTTGCTGGC...CGGACTGGTCATTTTAAAACGGATATCGAGGCTTACATTAACGAGCATAAAACCAGCCAG---CGGGCGGTTAGAAAAGATGCCGTCTTGGTCAATGAATGGATTATCTCAAGTGATAGTCATTTCTTT---GCCGATTTGACGGCGGCTGATATGCGCAAATATTTTGAAACAGCGAAGGACTATTTTGCTGAAAAATTTGGTGAA...GAAAATATTCGTTATGCAATTGTTCATCTTGATGAGAGT...........................------ACTCCCCATATGCATATGGGG---------------------ATTGTCCCCTTTGATGATGAACAT---...---...---AAATTATCTGCTAAACGAGTATTTAAT---CGGACGGCTTTGCGAGATGTTCAAGAT------------CAATTACCGGCTTATTTACCACAGCATGGCCTCAATATTCAGCGTGGGGTTCAAGAA------...TCGGGACGTAAAAGTTTGGCGGTACCGGGATATAAAGCC
PREA_LACPL/1-194 ATGAGT---TTTGCAGTGGCTAGAATGACGAAATTAAAA---GCTGATAATTTAGTCGGCATTGGCAATCATGACCAACGGAAAACGACTAATCAC.........AGCAACGAAGATATTGATGTTTCCCGCTCTCACCTGAATTATGATTTAGTGGCTGGG...CGCACTGATAACTTTAAAACGGATATTGAAGCCTATATCAACGAAAACAAAGCGAGTAAG---CGGGCAGTTCGCAAAGACGCTGTTTTAGTCAATGAGTGGATTATAACCAGTGACAAAGACTTTTTT---GAGCAATTAGACGAAGCCGAAACCCGTAAATATTTTGAAACAGCCAAACAATATTTTGCAGATAACTATGGTGAC...GAAAATATTCGCTATGCAGTTGTTCATATGGACGAGAAG...........................------ACCCCTCACATGCATATGGGC---------------------ATTGTGCCCTTTGATGATGATAAA---...---...---AAGCTCTCAGCTAAGCGTATATTCAAT---CGTGAAGCCTTACAGCACATTCAAGAG------------GAATTACCACAGTACCTCAAAGAAAATGGCTTTGATGTTCAACGTGGTAACAAAAAT------...AAAGAGCGTAAGAATTTATCAGTACCCGAATACAAAGCT
O32791_9LACT/1-193 ATGTCA---TTTGCAGTGGCGAGAATGCAGAAGGTAAAA---TCAGGAAATTTAGTCGGGGTAGGTAATCATAATCAGAGAAATACAGACAATCAT.........TCCAACAAAGATATTGATGTTGAACGGTCGCATTTAAATTATGATTTGGTCAAT---...CGGACAGAAAATTATAAACGAGATATTGAGCAATTTATTAACGACAATAAATCAAGTAGT---CGTGCTGTCAGAAAAGATGCTGTATTAATAAACGAATGGATCATAACTTCTGACAACCCATTTTTT---AAAGATAAAGACGATAAAGAAATTAAAGATTTTTTTGATACTGCGAAATCATATTTTGCGGACAAATTTGGCGAT...AATAATATCCGCTACGCTCAAGTTCACTTAGACGAAACG...........................------ACACCGCATATGCACTTAGGA---------------------ATTGTGCCGTTTAATGACGAACAC---...---...---AAGCTATCAGCAAAGACTGTTTTTAAT---CGTCAAGCCTTACAAGCGGTACAAGAC------------GAATTGCCAAAGTATTTAAATGAGCGTGGTTTTGAGCTTGAACGTGGCGAAAAAGGG------...TCAGAGCGTAAAAATTTAACGGTGCCTGAATATAAAAAG
O87277_9STAP/1-193 ATGAGT---TATGCAGTTTGTAGAATGCAAAAAGTGAAA---TCAGCTGGACTAAAAGGCATGCAATTTCATAATCAAAGAGAGCGAAAAAGTAGA.........ACGAATGATGATATTGACCATGAGCGAACACGTGAAAATTATGATTTGAAAAATGAT...AAAAATATTGATTACAACGAACGTGTCAAAGAAATTATTGAATCACAAAAAACAGGTACA---AGAAAAACGAGGAAAGATGCTGTTCTTGTAAATGAGTTGCTAGTAACATCTGACCGAGATTTTTTT---GAGCAACTGGATCCAGGAGAACAAAAACGATTTTTTGAGGAAAGTTATAAATTATTTTCCGAACGATATGGCAAG...CAAAATATTGCTTATGCAACAGTTCATAATGATGAGCAA...........................------ACCCCTCACATGCATTTAGGT---------------------GTTGTGCCTATGCGTGATGGA------...---...---AAACTGCAAGGAAAAAATGTGTTTAAT---CGTCAAGAACTGTTATGGCTACAAGAT------------AAATTCCCCGAGCATATGAAAAAACAGGGTTTTGAGTTGAAGCGTGGTGAACGTGGC------...TCTGACCGTAAACATATTGAGACAGCTAAATTTAAAAAA
PREA_BACTU/1-192 ATGAACAAATTTGCAATCATTCACATGCAGAAATTTCAA---ATTTCTGATGTGCAAGGGATTCAAAAACATAATCAAAGACAAGGAAAAAGTAAA.........TCAAATTTAGACATCGATTATTCGAAAAGTGAACAGAATTATGATTTGTTGAATCAA...CAAAAAATTAGATATGAAAGCACAATTAAACAAGAGATCAGTGAGCGAGTA------AAA---CGAAAGCCACGGGCAAATTCTGTTGTGCTTTCAGAATTTGTAGTAACAGCTTCGCCTGATTACATG---CATTCATTAAGTTTAGAAGAACAGAAACGTTATTTTGAGAGTTCACTAGATTTTATTCAAAAGCGTTATGGCAAA...CAAAATACGTTGTATGCGATGGTTCATATGGATGAAGCG...........................------ACACCACATATGCATATTGGT---------------------GTGATGCCAATTACAGAAGACAAT---...---...---CGTTTGTCCGCAAAAGATATGTTTACG---AGAAAAGAATTGATATCTTTGCAACAG------------GACTTCCCGTTGGAAATGCGGGAAAAAGGTTTTGATGTAGATCGGGGAGAAGGT---------...TCTGAGAAAAAACATTTATCGCCTCAAGCCTTTAAGGAA
Q45448_BACSU/1-193 ATGGCAAATTATGCAGTCATCAGGATGGAAAAATACAAA---AAAGATAGATTGAATGGAACGCAAAAACACAATCAGCGGGAGTTTCAAAAAAGC.........AAAAATGAAAATATTGATCGGGAGCGGACGCACTTAAATTATGATCTAGTGAACGAG...AAACCGATTAGCTATTCAAAAGCGATTCATGAAAAAATTGAGGGGCGAGTC------AAA---CGGAAGGTCCGAGCGGATGCTGTTTTGGTCAGCGAATTTTTGATCACGGCAAGTCCTGACTATATG---AATGGGCTGAGCGATGAGGAGCAGCGGCGCTATTTTGAAACAGCGGTTGATCATTTGAAAGAGAAATACAGCGCT...GAAAACATGCTTTATGCTACAGTCCATATGGATGAAGCG...........................------ACTCCTCATATGCATGTTGGT---------------------ATTGTACCGATCACAGAGGACGGC---...---...---CGACTCTCTGCGAAAGATTTTTTTAATGGCAAATTGAAGATGAAAGCCATTCAAGAT------------GATTTTCATCGGCACATGGTTGAAAACGGTTTTGACCTGGTGCGCGGCGAACCA---------...AGCGAAAAGAAGCATGAGAATGTTCACCAGTATAAAATA
Q53620_STAAU/1-198 ATGTCT---TATTCCATTGTTAGAGTTTCAAAAGTTAAATCTGGAACAAATACAACGGGCATACAAAAACATGTTCAAAGAGAAAATAATAATTAT.........GAAAATGAAGATATAGACCATAGTAAAACTTACTTAAATTATGATTTGGTAAATGCT...AATAAACAGAATTTTAATAACTTGATTGATGAAAAAATCGAACAGAATTATACAGGCAAA---AGAAAAATTAGAACAGACGCGATTAAACACATTGATGGTTTAATTACATCAGACAATGATTTCTTT---GATAATCAAACGCCAGAAGATACAAAGCAGTTTTTTGAATATGCTAAAGAGTTTTTAGAACAAGAATACGGTAAA...GATAATTTATTATATGCAACAGTTCACATGGACGAAAAA...........................------ACACCACATATGCATTATGGC---------------------GTTGTTCCAATAACTGATGATGGT---...---...---CGTTTAAGTGCTAAAGAAGTTGTAGGTAATAAAAAAGCTTTAACAGCGTTTCAAGAT------------AGATTTAATGAGCATGTTAAACAACGAGGATATGATTTAGAACGTGGGCAATCAAGACAAGTA...ACAAATGCTAAACATGAGCAAATAAGTCAGTATAAACAA
Q53618_STAAU/1-198 ATGGCG---TATTCTATTATCAGAGTTGCTAAAGTGAAATCAAAAACGAATACAAAAGGCATTCAAAAACATGTACAAAGACAAAATAAAAATTAT.........GAAAATATGGATATTGATTTAGAAAAATCATACTTAAATTACGATTTAGTCAATGAT...AGTCCGATTGATTATAATCAAAAAATCGAAGAGAAAATTGAACAAAATTATAATGGGAAA---CGCAAAATTAGAAAAGACGCAGTAAAACATATTGATGGTTTAATTACATCTGGTAATGAATTTTCT---AAAAATCAAACGCTTGAAGAAACAAAGCAGTTTTTTGAACATGCTAAAACGTTTTTAGAACAAGAGTATGGAAAA...GATAATTTATTATATGCAACAGTGCATATGGACGAAAAA...........................------ACACCTCATATGCATTATGGG---------------------GTAGTTCCGATTACAGAAGATGGT---...---...---CGATTGAGTGCAAAAGAAGTTTTAGGTAATAAAAAGGCACTAACTGAATTTCAAGAT------------AGATTTAACGAACATATCAATAGTTGTGGTTATGACTTGAGTAGAGGTATAACAAGGGGCGTT...ACACCGAGACGACATGAGCAGATAAGTCGTTATAAAAAT
PRE1_STAAU/1-198 ATGTCT---CATTCAATTTTGAGGGTTGCCAGAGTTAAAGGATCAAGTAATACAAACGGGATACAAAGACATAATCAAAGAGAGAATAAAAACTAT.........AATAATAAAGACATAAATCATGAGGAAACATATAAAAATTATGATTTGATTAACGCA...CAAAATATAAAGTATAAAGATAAAATTGATGAAACGATTGATGAGAATTATTCAGGGAAA---CGTAAAATTCGGTCAGATGCAATTCGACATGTGGACGGACTGGTTACAAGTGATAAAGATTTCTTT---GATGATTTAAGCGGAGAAGAAATAGAACGATTTTTTAAAGATAGCTTGGAGTTTCTAGAAAATGAATACGGTAAG...GAAAATATGCTGTATGCGACTGTCCATCTGGATGAAAGA...........................------GTCCCACATATGCACTTTGGT---------------------TTTGTCCCTTTAACAGAGGACGGG---...---...---AGATTGTCTGCAAAAGAACAGTTAGGCAACAAGAAAGACTTTACTCAATTACAAGAT------------AGATTTAATGAGTATGTGAATGAGAAAGGTTATGAACTTGAAAGAGGCACGTCCAAAGAGGTT...ACAGAACGAGAACATAAAGCGATGGATCAGTACAAGAAA
65KD_ZYMMO/1-192 ATGCCGAACTATGCAATCTTTAGGTTTGAAAAACATAAAACAGTTGGCACGATTAAAGCCGCGAGCCTGCATATGACGCGAGGCCGCGAAACA---.........------CAAAACGCTGACCCAGATAGAAAAGAACTAAACGAAATACTCAAAGGC---...---TCTACTGACCCATCAGCAGATGTTAAATCTATGCTGAATAAAATTCAGAAAGAAACGGGAAAGCCTCTTAGAAAAAACGGTGTGCAGGCCATAGAACTGTTCTTTGGTATGTCTCCAGAATGGTCA---AAACAGGCCACTCCTGAAAAACTCGAACACTGGAAAACAATCACCCAGCAATGGGCGGAACAAACCTTTGGAGAA...AACAACCTTGTATCTCTTCAGCTACATGCTGATGAAACA...........................------ACACCCCACTTAACCGGCTTT---------------------ATGGTGCCTAGAGACCCCGATACAGGC...---...---CGTTTAAACGCATCGAGATGGTTTGATGGTCGAAAAGCCCTTTCTGCCCTCCAGACG------------GATTATGCGGCTTCTATGGAGCCTCTAGGG------CTGGCCAGAGGCGTAAAAGGT------...TCAAAAGCAACGCATCAAAGAGTCCAAAGACATTACGGA
O54530_ECOLI/1-186 ATGGCGGCATACGCGATCATGCGATGCAAGAAGCTGGCGAAAATGGGCAACGTGGCGGCCAGTCTCAAGCACGCCTACCGCGAGCGCGAGACG---.........------CCCAACGCTGACGCCAGCAGGACGCCAGAGAACGAGCACTGGGCGGCCAGC...AGCACCGATGAAGCGATGGGCCGACTGCGCGAGTTGCTGCCAGAGAAGCGG------------CGCAAG---------GACGCTGTGTTGGCGGTCGAGTACGTCATGACGGCCAGCCCGGAATGGTGG---AAGTCGGCCAGCCAAGAACAGCAGGCGGCGTTCTTCGAGAAGGCGCACAAGTGGCTGGCGGACAAGTACGGGGCG...GATCGCATCGTGACGGCCAGCATCCACCGTGACGAAACC...........................------AGCCCGCACATGACCGCGTTC---------------------GTGGTGCCGCTGACGCAGGACGGC---...---...---AGGCTGTCGGCCAAGGAGTTCATCGGCAACAAAGCGCAGATGACCCGCGACCAGACC------------ACGTTTGCGGCCGCTGTGGCCGATCTAGGG------CTGCAACGGGGCATCGAGGGC------...AGCAAGGCACGTCACACGCGCATTCAGGCGTTCTACGAG
Q52058_9ZZZZ/3-190 AGCAATAACTTTTGTATCCTGCGTTTTCAAAAAATCAAGTCGGCAATAGCTGTCCGAAGGCGATTGAAGCATAACTCAAGAATAAATCAACCT---.........------GAGAATGCCAATCCTGAAAAATCAAATCTAAATCAGTATTTTAACTCG---...------------TATGATGAGGCTTTGGAAATTTACAAAAAACAGCTTCCT------------GAAAAAGTGCGAAAAAATGCAGTTCACGCTGTAGAAATTCTCATAACCGCGTCTCCTGAAATTCTT---TCAAAAATGACCTTTCAAGAGCAAAAAAACTACTTCAACCAGTCTTTAGCTTGGGCTGAAAACCAGCTTGGAGGCcgtGAAATTCTTCTAAGTGCCTGCATTCACAGGGATGAAGCA...........................------ACCCCACATTTGCATATGATT---------------------TTTATGCCGCTTAAAGAAAAAAAG---...---...---CTTAATGCAAACTACTACATCGGCGGCTCAAAACATAAAATGATAGAGCTTCAAGAC------------GATTTTTACAAAAATGTCGGACAAAAA---TTTAAGATGGATAGAGGACGACCGGCAGCGATT...ACTAAGGCTAAACACCTTAATTCCAGGGACTATTTAGCT