EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01076 - Mob_Pre)
Plasmid recombination enzyme
(Pfam reference: accession no. PF01076)
(Interpro reference: accession no. IPR001668)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
18 sequences @ 234 aa
(ave. pairwise identity: 0.31)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 13.71)
nucleotides
(available for above)
18 sequences @ 702 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 8.91)
amino acids, restricted set
(corresp. to available nt seqs)
18 sequences @ 234 aa
(ave. pairwise identity: 0.31)
New Hampshire format
(total tree length: 13.71)