EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01073 - 3Beta_HSD)
3-beta hydroxysteroid dehydrogenase/isomerase family
(Pfam reference: accession no. PF01073)
(Interpro reference: accession no. IPR002225)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
12 sequences @ 307 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 7.29)
nucleotides
(available for above)
12 sequences @ 921 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 5.47)
amino acids, restricted set
(corresp. to available nt seqs)
12 sequences @ 307 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 7.29)