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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01068 phylogeny
for restricted amino acid alignment


 
((((((DNLI_CANAL/259-494,DNL4_YEAST/256-466),O74833_SCHPO/268-476),(Q9VYA5_DROME/258-461,DNL4_HUMAN/181-384)),(DNLI_NPVLD/173-367,(Q9VG84_DROME/147-341,(((DNLI_FOWPV/211-405,DNL3_HUMAN/396-590),DNLI_VACCC/206-399),Q90026_9POXV/212-406)))),Q9PYQ5_GVXN/195-361),((((O34398_BACSU/13-208,O28549_ARCFU/10-196),((O69698_MYCTU/11-201,Q9XAM3_STRCO/11-197),Y938_MYCTU/460-637)),O31917_BACSU/5-183),((P95096_MYCTU/186-380,(((DNLI_METJA/226-440,DNLI_PYRFU/224-422),DNLI_METTF/227-425),(DNLI_PYRAE/226-424,DNLI_ACIAM/236-436))),((DNLI_YEAST/393-598,DNLI_SCHPO/390-595),(((DNL1_HUMAN/542-746,DNL1_XENLA/695-899),Q9W1H4_DROME/369-573),DNLI_ARATH/418-622)))),((((O58234_PYRHO/76-247,O67191_AQUAE/62-235),(O27289_METTH/82-255,(Y414_METJA/85-260,O29409_ARCFU/80-251))),DNLI_HAEIN/35-189),(((O41026_CHVP1/6-186,(DNLI_BPT7/8-240,DNLI_BPT3/8-246)),O68776_YERPE/73-267),(DNLI_BPT4/135-367,DNLI_ASFB7/126-318))));
((((((DNLI_CANAL/259-494:0.37487,DNL4_YEAST/256-466:0.55893):0.26847,O74833_SCHPO/268-476:0.60467):0.10828,(Q9VYA5_DROME/258-461:0.77021,DNL4_HUMAN/181-384:0.51377):0.21260):0.46036,(DNLI_NPVLD/173-367:0.59339,(Q9VG84_DROME/147-341:0.42112,(((DNLI_FOWPV/211-405:0.40310,DNL3_HUMAN/396-590:0.24571):0.09127,DNLI_VACCC/206-399:0.35610):0.05232,Q90026_9POXV/212-406:0.55820):0.14007):0.02788):0.39329):0.16013,Q9PYQ5_GVXN/195-361:0.83176):0.09704,((((O34398_BACSU/13-208:1.06737,O28549_ARCFU/10-196:0.64318):0.19257,((O69698_MYCTU/11-201:0.28939,Q9XAM3_STRCO/11-197:0.24950):0.78495,Y938_MYCTU/460-637:0.68330):0.13363):0.21148,O31917_BACSU/5-183:0.89183):0.13171,((P95096_MYCTU/186-380:0.83294,(((DNLI_METJA/226-440:0.31355,DNLI_PYRFU/224-422:0.32489):0.16420,DNLI_METTF/227-425:0.48303):0.09128,(DNLI_PYRAE/226-424:0.38203,DNLI_ACIAM/236-436:0.32885):0.29924):0.04893):0.22958,((DNLI_YEAST/393-598:0.35737,DNLI_SCHPO/390-595:0.28156):0.03708,(((DNL1_HUMAN/542-746:0.11647,DNL1_XENLA/695-899:0.12578):0.12117,Q9W1H4_DROME/369-573:0.29942):0.12124,DNLI_ARATH/418-622:0.28228):0.09525):0.48516):0.16790):0.09776,((((O58234_PYRHO/76-247:0.34544,O67191_AQUAE/62-235:0.53633):0.22385,(O27289_METTH/82-255:0.44399,(Y414_METJA/85-260:0.39282,O29409_ARCFU/80-251:0.56733):0.09618):0.15350):1.11299,DNLI_HAEIN/35-189:1.17943):0.31915,(((O41026_CHVP1/6-186:1.23222,(DNLI_BPT7/8-240:0.15671,DNLI_BPT3/8-246:0.20774):0.95600):0.08429,O68776_YERPE/73-267:1.36218):0.16128,(DNLI_BPT4/135-367:1.18007,DNLI_ASFB7/126-318:0.87790):0.33610):0.15236):0.19380);