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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01068 alignment |
| O28549_ARCFU/10-196 | PMLAVRSK.-P-------FS..................SDDHIYEVKWDGTRCLAFVD..V-EGKRVRLQNRRLLDITY---.----RYPEI-----.KLLDAVERN..AILDGEVVV..I-KDGKPSFPLLQKREHV-DSRF..........K........IEILSKTIPAVYIVFDVLYC.........DG-W.V.......VDLELMERKKILSEVL............-.-.-QSRGRVVVEEWIEGKG----EEFYRKAVEMGLEGIVAKK--.KDGRYLIG..KR-SRLWKKIK |
| O31917_BACSU/5-183 | PMLLHSIK.-------EPFN..................DENYITELKFDGIR--LILS..K-FDNQIKLYTRHNNEVTS---.----KFPELMDLDIpDG-------..TVLDGEVIV..--AASGGAPDFEAVMERFMSKKS..........-........------AHNIVYCVFDVIYK.........DGQS.I.......AAKPLTERKTVLNSLE............-.-.-LDHPNVFVIEGTQGNGL----AYFNLAKEKNLEGIVIKK--.ANSPYEIN..KR-SHNWLKVI |
| Q9PYQ5_GVXN/195-361 | AMLALPCK.-----DFNQLN..................YQNYCVEIKYDGER--LQVH..KMNDGTIVCYKRNMNAHTK---.----CLVELLPFLE.DAL-RDVKD..VIIDGELM-..-----------------------..........-........------DGNAGFIAFDVLIH.........NGRN.M.......MNADLKTRKLLLSTCV............-.-.-KANERVVVIEYHESNDRNLVVDLIKRYLKEDVEGVVVKD--.LTAPYECK..KK---KWLKIK |
| Q90026_9POXV/212-406 | PMLADICR.-SVSTIVNKYK..................RGIY-AEIKYDGER--VQIH..K-YDDVYEFYSRNLRPVTP---.----HKVQGLDEAL.SIAFPSANN..FILDAELVL..VDEHTGECLPFGSLGVHK-KASF..........K........------SSTPCLFVFDCLFY.........NDKS.L.......LRVPFVQRRAFVETTI............-.-.KEIKHKIVLSDIRTIRSESDITEALNESVEKGLEGLMLKG--.GDDVYKPG..LR---GWLKIK |
| DNL3_HUMAN/396-590 | PMLAEACK.-SVEYAMKKCP..................NGMF-SEIKYDGER--VQVH..K-NGDHFSYFSRSLKPVLP---.----HKVAHFKDYI.PQAFPGGHS..MILDSEVLL..IDNKTGKPLPFGTLGVHK-KAAF..........Q........------DANVCLFVFDCIYF.........NDVS.L.......MDRPLCERRKFLHDNM............-.-.VEIPNRIMFSEMKRVTKALDLADMITRVIQEGLEGLVLKD--.VKGTYEPG..KR---HWLKVK |
| DNLI_VACCC/206-399 | PMLAESCD.-SVNKAFKKFP..................SGMF-AEVKYDGER--VQVH..K-NNNEFAFFSRNMKPVLS---.----HKVDYLKEYI.PKAFKKATS..IVLDSEIVL..VDEHN-VPLPFGSLGIHK-KKEY..........K........------NSNMCLFVFDCLYF.........DGFD.M.......TDIPLYERRSFLKDVM............-.-.VEIPNRIVFSELTNISNESQLTDVLDDALTRKLEGLVLKD--.INGVYEPG..KR---RWLKIK |
| DNLI_FOWPV/211-405 | PMLASACK.-TFSEAVKKCP..................NGII-VEFKYDGER--IQIH..K-HDKNFKYFSRSLKPITP---.----HKVTDFEELL.DRAFPSAKN..MILDGEIIL..IDTETNQPLPFGTLGINK-KSMY..........H........------NACVCIFIFDCLYF.........NDTV.L.......IDKPLIERRNIIHANI............-.-.KEIPNRILLSEVKNISTDEELSKLLHIVLSKNIEGFVLKD--.AKGVYEPG..MR---RWLKIK |
| Q9VG84_DROME/147-341 | PMLASPCK.-SVEDAFKKSP..................TGLY-SEIKYDGER--VQIH..K-QGNDFKFFSRNLKPVVD---.----HKIRALKKYI.PQAFPGGGE..MILDSEIIL..VDTDTGALLPFGSLGAHK-KQTF..........A........------NAAVCLFVFDCILY.........DGED.L.......TQLPFRKRREILEQNI............-.-.QPIKSHVQLSESEFLKTTRELAAMTARVLHANLEGVVLKS--.PTSTYQPG..KR---NWLKVK |
| DNLI_NPVLD/173-367 | PALAQPCR.-RLASVLVKHP..................EGAL-AEVKYDGER--VQVH..K-AGSRFKFFSRTLKPVPE---.----HKVAGCREHL.TRAFPRARN..FILDAEIVM..VD-GSGEALPFGTLGRLKQMEHA..........-........------DGHVCMYIFDCLRY.........NGVSyL.......NATPLDFRRRVLQDEI............-.-.VPIEGRVVLSAMERTNTLSELRRFVHRTLATGAEGVVLKG--.RLSSYAPN..KR---DWFKMK |
| DNLI_ARATH/418-622 | PMLAKPTK.-GVAEILNKFQ..................DIVFTCEYKYDGER--AQIH..FMEDGTFEIYSRNAERNTG---.----KYPDVALALS.RLKKPSVKS..FILDCEVVA..FDREKKKILPFQILSTRA-RKNV..........N........VNDI--KVGVCIFAFDMLYL.........NGQQ.L.......IQENLKIRREKLYESF............-.-.EEDPGYFQFATAVTSNDIDEIQKFLDASVDVGCEGLIIKTLD.SDATYEPA..KR-SNNWLKLK |
| Q9W1H4_DROME/369-573 | PMLAQPTK.-GVHEVFERFG..................GMQITCEWKYDGER--AQIH..RNEKGEISIFSRNSENNTA---.----KYPDLIARST.ALLKGDVKS..YIIDSEIVA..WDVERKQILPFQVLSTRK-RKNV..........D........IEEI--KVQVCVYIFDLLYI.........NGTA.L.......VTKNLSERRKLLLEHF............-.-.QEVEGEWKFATALDTNDIDEVQQFLEESIKGNCEGLMVKTLD.EEATYEIA..KR-SRNWLKLK |
| DNL1_XENLA/695-899 | PMLAHPTK.-GIGEVLKRFD..................EAAFTCEYKYDGER--AQIH..ILENGEVHVYSRNQENNTT---.----KYPDIISRIP.KIKKESVKS..CILDTEAVA..GDAEKKQIQPFQVLTTRK-RKDV..........D........ASEI--KVQVCVYAFDMLYL.........NGES.L.......VKEPFAKRRQLLRDSF............-.-.LETEGQFMFATYMDKSNTDEISEFLDQSIKDSCEGLMVKTLE.QDATYEIA..KR-SHNWLKLK |
| DNL1_HUMAN/542-746 | PMLAHPTR.-GISEVLKRFE..................EAAFTCEYKYDGQR--AQIH..ALEGGEVKIFSRNQEDNTG---.----KYPDIISRIP.KIKLPSVTS..FILDTEAVA..WDREKKQIQPFQVLTTRK-RKEV..........D........ASEI--QVQVCLYAFDLIYL.........NGES.L.......VREPLSRRRQLLRENF............-.-.VETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLD.VDATYEIA..KR-SHNWLKLK |
| DNLI_SCHPO/390-595 | PMLAKPTK.-QISEVLNTFD..................QAAFTCEYKYDGER--AQVH..FTEDGKFYVFSRNSENMSV---.----RYPDISVSVS.KWKKPDARS..FILDCEAVG..WDRDENKILPFQKLATRK-RKDV..........K........IGDI--KVRACLFAFDILYL.........NGQP.L.......LETPLNERRKLLYSMF............-.-.QPSTGDFTFAKHSDQKSIESIEEFLEESVKDSCEGLMVKMLEgPDSHYEPS..KR-SRHWLKVK |
| DNLI_YEAST/393-598 | PMLAKPTK.-AINEVLDRFQ..................GETFTSEYKYDGER--AQVH..LLNDGTMRIYSRNGENMTE---.----RYPEINITDF.IQDLDTTKN..LILDCEAVA..WDKDQGKILPFQVLSTRK-RKDV..........E........LNDV--KVKVCLFAFDILCY.........NDER.L.......INKSLKERREYLTKVT............-.-.KVVPGEFQYATQITTNNLDELQKFLDESVNHSCEGLMVKMLEgPESHYEPS..KR-SRNWLKLK |
| DNLI_ACIAM/236-436 | PMLAERLS.-DPAEMLSKVG..................NIAL-VDYKYDGER--GQIH..K-AGDKIFIFSRRLENITN---.----QYPDVAEYIS.KYVKGN--E..FIVEGEIIP..VDPETGEMRPFQELMHR--KRKS..........D........IHEAIKEYPVNVFLFDLMYY.........EGED.Y.......TVKPLSERRKKLESIV............-.-.-EDNDYVHIATHIITDNVEKLKEFFYQAISEGAEGVMVKSLA.PDAIYQAG..SR-GWLWIKFK |
| DNLI_PYRAE/226-424 | PMLAQRLS.-SASEILAKLG..................GSAI-CEYKYDGER--AQIH..L-TPGGVKIFSRRLEDITH---.----AYPDVVKAVK.EAVSAK--E..AILEGEIVA..VDPDTGDMLPFQELMHR--KRKH..........D........VATAVELYPTVLYLFDVLYV.........DGED.L.......TEEPLIYRRVRLSEIV............-.-.-CETDKVSIAKWRIFDNAEAVDVFFHESVSMGTEGLICKS--.PSSIYEMG..AR-GWNWIKYK |
| DNLI_METTF/227-425 | PMLAQLAS.-SIESAITEL-..................GRAF-CETKYDGIR--VQIH..R-CGDEVSIFTRRLENITA---.----AVPEILEGVE.EALPAD--D..YIVEGEIIV..T--MDGRPASFQYILQRV-RRKY..........D........VDRLTREVPLSLFLFDVLYH.........RG-P.L.......IDEPLWHRREVLESIL..........seIpGrVEASRMVDVG----PDNLDDALWLFKESIREGHEGIMIKD--.TEAPYIPG..IR-GKKMLKFK |
| DNLI_PYRFU/224-422 | PMLAQQAA.-SIRDALLEMG..................GEAE-FEIKYDGAR--VQVH..K-DGSKIIVYSRRLENVTR---.----AIPEIVEALK.EAIIPE--K..AIVEGELVA..I-GENGRPLPFQYVLRRF-RRKH..........N........IEEMMEKIPLELNLFDVLYV.........DGQS.L.......IDTKFIDRRRTLEEII............-.-.-KQNEKIKVAENLITKKVEEAEAFYKRALEMGHEGLMAKR--.LDAVYEPG..NR-GKKWLKIK |
| DNLI_METJA/226-440 | PMLAQLTP.-SIEEALLEM-..................GRAQ-FETKYDGAR--VQIH..K-DGNKVKIYSRRLEDVTN---.----ALPEIVEAVK.NINVD---K..LIVEGECVA..IDKQTGKPRPFQDILRRF-RRKY..........D........IGKMMKEINLRVYLFDILYK.........DGVS.F.......IDEEFEKRRKVLEEIVgyendwrterkrIeKeLKSDKIIDISYKLVTNDAKEAREFYNWSLSIGHEGVMIKN--.LKAPYTPG..SR-VRTMYKFK |
| P95096_MYCTU/186-380 | PMLAQTAT.-SVHDALERHG..................GTTI-FEAKLDGAR--VQIH..R-ANDQVRIYTRSLDDVTA---.----RLPEVVEATL.AL---PVRD..LVADGEAIA..LCPDN-RPQRFQVTASRF-GRSV..........D........VAAARATQPLSVFFFDILHR.........DGTD.L.......LEAPTTERLAALDALV............-.-.----PARHRVDRLITSDPTDAANFLDATLAAGHEGVMAKA--.PAARYLAG..RR-GAGWLKVK |
| DNL4_HUMAN/181-384 | PMLAAI--.ADIEHIEKDMK..................HQSFYIETKLDGER--MQMH..K-DGDVYKYFSRNGYNYTDQFGaS--PTEGSLTPFIH.NAFKADIQI..CILDGEMMA..YNPNTQTFMQKGTKFDI--KRMV..........E........DSDLQTC----YCVFDVLMV.........NNKK.L.......GHETLRKRYEILSSIF............-.-.TPIPGRIEIVQKTQAHTKNEVIDALNEAIDKREEGIMVKQ--.PLSIYKPD..KR-GEGWLKIK |
| Q9VYA5_DROME/258-461 | PMLCERFP.GDIQEL---MQ..................SDVLYLETKMDGER--FQLH..I-DRGRFMYISRNGVDYTRNFGhSY--DHGTLTPKLR.GLLPLGLES..IILDGEMMV..WDTNKLRFREKGENTDV--KSLK..........P........EGSWQPC----FVVYDLLYF.........NGQS.L.......LDHTYIQRAYKLQKLI............-.-.VEQSGVLQLMRARKIGSVQEFNELFQQALDSHAEGIVLKK--.QGSRYQPG..VRLGGGWYKDK |
| O74833_SCHPO/268-476 | PQLANFKK.KDLHQTLEAMG..................NKPFWIEEKLDGER--IQLH..M-SSGKFQFYSRNARSYTYAYGsSYFDEQSRLTQYII.GAFDKRISQ..IILDGEMVT..WDPVLETVIPYGS---L--RSIF..........E........DSSSHSSYSPYYVVFDILYL.........NGKS.L.......VKYSLESRRRILEKVI............-.-.VRESHRMSILPYKVGSTIEDIEAELRNVIQEGSEGLVIKK--.PSGSYHLG..ER-MDDWIKVK |
| DNL4_YEAST/256-466 | PQLAKKVN.LSYEKICRTLH..................-DDFLVEEKMDGER--IQVHymN-YGESIKFFSRRGIDYTYLYGaSL--SSGTISQHL-.-RFTDSVKE..CVLDGEMVT..FDAKRRVILPFGL---V--KGSA..kealsfnsI........NNVD---FHPLYMVFDLLYL.........NGTS.L.......TPLPLHQRKQYLNSIL............-.-.SPLKNIVEIVRSSRCYGVESIKKSLEVAISLGSEGVVLKY--.YNSSYNVA..S-RNNNWIKVK |
| DNLI_CANAL/259-494 | PQLSERLT.TSYKTLVKKLQrkhemdppyekkfqelglENKFYIEEKMDGDR--MLLH..K-DGDSFKFFSRRLKDYSYLYGeSF--QFGALTKFLA.HAFAGNIQS..VILDGEMVA..YDYERNVILPFGT---L--KSSAiqesvrqfttI........DQYEQQTAYPFFLVFDILFL.........NGKD.L.......TNYPLFFRKNILNRIL............-.-.RPIPNRFEVLDTRLGSSSEDIERAIREVVSSRCEGLVLKN--.VQSKYEID..GFRNPDWIKVK |
| Y938_MYCTU/460-637 | PMLATHGTvAGLK-------..................ASQWAFEGKWDGYR--LLVE..A-DHGAVRLRSRSGRDVTA---.----EYPQL-----.RALAEDLADhhVVLDGEAVV..--LDSSGVPSFSQMQNRG-----..........-........-----RDTRVEFWAFDLLYL.........DGRA.L.......LGTRYQDRRKLLETLA............-.-.--NATSLTVPELLPGDG----AQAFACSRKHGWEGVIAKR--.RDSRYQPG..RR-CASWVKDK |
| Q9XAM3_STRCO/11-197 | PMLAKSVA.-KI--------..................PPGMHYEAKWDGFR--AIVY..R-DGDEVELGSRTGKPLTR---.----YFPELVVAVR.ERLPER---..CVVDGEIVI..---ARDGHLDFDALTERIHPADS..........R........VRTLAERTPASLVAFDLLAL.........DDAS.L.......LDVGLADRRALLVRAL............-.-.--SGVTPPVHVAPATDDIEVARRWFEQYEGAGLDGVVAKP--.LDLRYRQD..ER---AMYKIK |
| O69698_MYCTU/11-201 | PMLAKSVT.-AI--------..................PPDASYEPKWDGFR--SICF..R-DGDQVELGSRNERPMTR---.----YFPELVAAIR.AELPHR---..CVIDGEIII..---ATDHGLDFEALQQRIHPAES..........R........VRMLADRTPASFIAFDLLAL.........GDDD.Y.......TGRPFSERRAALVDAV............-.TgSGADADLSIHVTPATTDMATAQRWFSEFEGAGLDGVIAKP--.PHITYQPD..KR---VMFKIK |
| O34398_BACSU/13-208 | PPI-----.-----------..................GAEWRYEVKYDGYRCILRIH..---SSGVTLTSRNGVELSS---.----TFPEITQFAK.TAFQHLEKElpLTLDGEIVC..LVNPCRADFEHLQVRGRLKRPDK..........-........IQESANARPCCFLAFDLLER.........SGED.V.......TLLSYLDRKKSLRELI...........sAaKlPASPDPYAKETIQSIPCYDHFDQLWEMVIKYDGEGIVAKK--.TNSKWLEK..KR-SSDWLKYK |
| O68776_YERPE/73-267 | PFKPNPKA.-----------..................KWPMIGSLKLDGLR--VICEviV-DEEEVNFLTRTGNPITS---.----LDHLKPAMLE.RGRLSGFKH..IFFDGE---..-----GTAGTFNQSVSALRKKNV..........-........-----KAIGAVYHIFDFFLP.........EWRAqAkskeylkTGMKLKERLAMLVSLF...........rNtCgEDYAQDIHLHPFYIIHSHEDFIERFMKRLDENEEGEMGKD--.PDSVYEF-..KR-TRSWWKLK |
| DNLI_HAEIN/35-189 | GWV-----.-----------..................-----MSEKLDGVR------..-GYWNGKQLLTRQGQRLSP---.----P---------.AYFIKDFPP..FAIDGELF-..--SERNHFEEISTITKSF-KGDG..........-........------WEKLKLYVFDVPDA.........EGN-.L.......FERLAKLKAHLLEHPT............-.-.----TYIEIIEQIPVKDKTHLYQFLAQVENLQGEGVVVRN--.PNAPYE-R..KR-SSQILKLK |
| DNLI_ASFB7/126-318 | PMLVKYFN.-IIPKTFFEE-..................ETDPIVQRKRNGVRAVACQQ..--GDGCILLYSRTEKEFLG---.-----LDNIKKELK.QLYLFIDVR..VYLDGELYL..------HRKPLQWIAGQANAKTD..........-........------SSELHFYVFDCFWS.........DQ--.-.......LQMPSNKRQQLLTNIF............-.KqKEDLTFIHQVENFSVKNVDEALRLKAQFIKEGYEGAIVRN--.ANGPYEPGynNYHSAHLAKLK |
| DNLI_BPT3/8-246 | PFKAVSFVeSAVKKALET--..................SGYLIADCKYDGVRGNIVVD..--NVAEAAWLSRVSKFIPALEHlNGFDKRWQQLLNDD.RCIFPDG--..FMLDGELMVkgVDFNTGSGLLRTKWVKRDNMGFHltnvptkltpKgrevidgkFEFHLDPKRLSVRLYAVMPIhiaesgedyDVQNlL.......MPYHVEAMRSLLVEYF............-.-.--PEIEWLIAETYEVYDMDSLTELYEEKRAEGHEGLIVKD--.PQGIYKRG..KK--SGWWKLK |
| DNLI_BPT7/8-240 | PFKAVSFVeSAIKKALDN--..................AGYLIAEIKYDGVRGNICVD..--NTANSYWLSRVSKTIPALEHlNGFDVRWKRLLNDD.RCFYKDG--..FMLDGELMVkgVDFNTGSGLLRTKWTDTKNQEFHeelfvepirkK......dkVPFKLHTGHLHIKLYAILPLhivesgedcDVMTlL.......MQEHVKNMLPLLQEYF............-.-.--PEIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKD--.PMCIYKRG..KK--SGWWKMK |
| DNLI_BPT4/135-367 | QMLASSYD.---EKGINKNI..................KFPAFAQLKADGARCFAEVR..GDELDDVRLLSRAGNEYLGLDL.----LKEELIKMTA.EARQIHPEG..VLIDGELVYheQVKKEPEGLDFLFDAYPENSKAKefaevaesrtAsngianksLKGTISEKEAQCMKFQVW--.........DYVPlVeiyslpaFRLKYDVRFSKLEQMT............-.-.-SGYDKVILIENQVVNNLDEAKVIYKKYIDQGLEGIILKN--.IDGLWENA..RS--KNLYKFK |
| O41026_CHVP1/6-186 | PLLAATLE.-NIEDV-----..................QFPCLATPKIDGIR------..--SVKQTQMLSRTFKPIRN---.-------SVMNRLL.TELLPEGS-..---DGEISI..----EGATFQDTTSAVMTGHKMY..........-........------NAKFSYYWFDYV--.........TDDP.L.......--KKYIDRVEDMKNYI.........tvhPhIlEHAQVKIIPLIPVEINNITELLQYERDVLSKGFEGVMIRK--.PDGKYKFG..RSTLKEGILLK |
| O29409_ARCFU/80-251 | PTIKKHFG.-----------..................DREVVLEEKMNGYN--VRIV..K-VGDNLYAITRRGLICPY---.----TTEKARTLID.DEFFRDYPD..YMLCCEAVG..------RASPYVPTDVYGI----..........-........-------ETLEFFLFDVREG.........KTNQpV.......---TIDEKKEIAEKYG............-.-.---FRLAEILETVSSDDVARIKEVVEKLNKNRREGVVFKD--.REMVLNPL..KY-TTSYANQS |
| Y414_METJA/85-260 | PTIKKHFI.-----------..................-DKVVIEEKLNGYN--IRIV..K-IDGEVYALTRSGYICPF---.----TTKKVKKFLN.LEILDDYSE..YMLCGEMIG..------INNPYTPYYYKEVDRGF..........-........-------ENLGFYIFDIKER.........ETNKsL.......---PIKERINLCEKYN............-.-.-LPYVKPLAVVD-KDEAHIHVREIIEKLNKEGREGVVLKD--.PDMAVSPI..KY-TTHYTQCE |
| O27289_METTH/82-255 | PTIQEHFR.-----------..................-DRVAVEEKMNGYN--VRIA..CLSSGETVALTRGGHVCPF---.----TTRKAQELLDlSEFFREHPD..LVICGEMIG..------RDNPYVSQDYPEVG---..........-........--------PLGFRVFDLREK.........NTNRpL.......---PVEERRALLDSYG............-.-.-LPNVRLFGVYP-IEEAASEVADIIRALGMAGREGVVMKD--.PSMEVPPL..KY-TSSQAHAR |
| O67191_AQUAE/62-235 | TGLREQFE.-----------..................-APFWVEEKVDGYN--TRIF..K-YGDNYYALSRGGFICPF---.----TTDRLPDLID.LRILDENPD..LVICAEVAG..------PENPYIEESPPYVK---..........-........-------EDVQLFVFDFMKK.........NEQGfL.......---SQEEKMELIEKYN............-.-.-LPHVEILGRFTASEEGIKKIKEILKRFNEEGREGVVFKE--.DSERNKRA..KY-ITSYANLM |
| O58234_PYRHO/76-247 | NGIKRTFK.-----------..................RGEFYVEEKVDGYN--VRVV..K-FRGKILGITRGGFICPF---.----TTERISDFIP.EEFFKDHPN..LILVGEMAG..------PESPYLVEGPPYVK---..........-........-------EDIQFFLFDIQEL.........GTGRsL.......---PVEERLKIAEEYG............-.-.-ISHVEVFGKFTYKD--LEEIYEIVERLSREGREGIVMKS--.PDMR-KMV..KY-VTPYANIN |