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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01066 phylogeny
for nucleotide alignment


 
(((((((((O83712_TREPA/217-357,O83677_TREPA/83-245),((O86693_STRCO/114-247,O54078_RHOSH/92-226),O32921_MYCLE/42-189)),(Q9ZBK7_STRCO/54-188,(PSS_MYCTU/44-196,(((((Q9Z6S6_CHLPN/53-199,O84833_CHLTR/53-196),(PSS_HELPY/37-171,O32618_HELFE/15-149)),(PSS_YEAST/116-266,(O94584_SCHPO/82-231,Q9ZQW1_WHEAT/81-230))),((Q9X5E4_ZYMMO/14-164,Q9ZDT3_RICPR/16-175),PSS_METJA/31-192)),(O27106_METTH/41-178,PSS_BACSU/32-166))))),((Q9RKH5_STRCO/55-203,((Q9XY91_TOXGO/81-243,(((PIS_YEAST/46-201,YAT8_SCHPO/56-232),CDIPT_RAT/37-197),(Q8SX37_DROME/40-196,Q9U2G1_CAEEL/43-200))),Q9X7V0_STRCO/49-216)),(O67288_AQUAE/55-200,((((O28530_ARCFU/39-167,Y1480_AQUAE/57-191),((O07149_MYCLE/58-201,((Q9UYD0_PYRAB/54-184,Y460_PYRHO/54-184),O27726_METTH/58-193)),O29122_ARCFU/1-139)),(Q9UWW0_SULSO/57-192,Q9YBS3_AERPE/4-138)),(((O67379_AQUAE/284-421,(Q9UZW1_PYRAB/278-415,O29976_ARCFU/347-486)),Q9YBT3_AERPE/75-218),O27985_ARCFU/204-342))))),((O67090_AQUAE/29-172,(((((((O13899_SCHPO/429-567,CT155_HUMAN/137-284),CRD1_YEAST/98-268),(Q9Z7T9_CHLPN/28-161,O84503_CHLTR/28-161)),PGSA_AQUAE/31-170),Q9X2H5_THEMA/36-169),Q9ZM16_HELPJ/67-196),(P74372_SYNY3/34-170,((((O33288_MYCTU/63-196,O86813_STRCO/109-242),Q53090_RHOSH/43-218),(((PGSA_PSEFL/34-175,PGSA_ECOLI/35-173),PGSA_HAEIN/36-174),O80952_ARATH/138-289)),(PGSA_BACSU/47-184,(O87532_STRPY/39-165,((PGSA_MYCGE/78-224,PGSA_MYCPN/70-216),(PGSA_RICPR/38-176,((O84803_CHLTR/42-186,Q9Z6V9_CHLPN/40-184),O51663_BORBU/44-199))))))))),PGSA_TREPA/46-195)),O28235_ARCFU/38-184),CPT1_YEAST/82-235),((Q9V6Q4_DROME/93-228,Q9Y6K0_HUMAN/124-263),(Q9XW94_CAEEL/141-278,Q19737_CAEEL/107-242))),Q9SP57_BRACM/86-221,Q39810_SOYBN/86-221);
(((((((((O83712_TREPA/217-357:0.82287,O83677_TREPA/83-245:1.13628):0.19690,((O86693_STRCO/114-247:0.14505,O54078_RHOSH/92-226:0.34865):0.37801,O32921_MYCLE/42-189:0.64381):0.08473):0.12295,(Q9ZBK7_STRCO/54-188:0.33787,(PSS_MYCTU/44-196:0.34251,(((((Q9Z6S6_CHLPN/53-199:0.21921,O84833_CHLTR/53-196:0.20651):0.42086,(PSS_HELPY/37-171:0.17410,O32618_HELFE/15-149:0.17095):0.26114):0.07590,(PSS_YEAST/116-266:0.16990,(O94584_SCHPO/82-231:0.36766,Q9ZQW1_WHEAT/81-230:0.30750):0.11408):0.31738):0.15933,((Q9X5E4_ZYMMO/14-164:0.48655,Q9ZDT3_RICPR/16-175:0.42613):0.12935,PSS_METJA/31-192:0.70225):0.13899):0.14877,(O27106_METTH/41-178:0.53653,PSS_BACSU/32-166:0.50276):0.13810):0.35860):0.13144):0.22808):0.13799,((Q9RKH5_STRCO/55-203:0.55020,((Q9XY91_TOXGO/81-243:0.55213,(((PIS_YEAST/46-201:0.40844,YAT8_SCHPO/56-232:0.35984):0.30826,CDIPT_RAT/37-197:0.19888):0.12533,(Q8SX37_DROME/40-196:0.24988,Q9U2G1_CAEEL/43-200:0.42634):0.04571):0.21389):0.25476,Q9X7V0_STRCO/49-216:0.60498):0.11748):0.09285,(O67288_AQUAE/55-200:0.81888,((((O28530_ARCFU/39-167:0.33668,Y1480_AQUAE/57-191:0.67936):0.13049,((O07149_MYCLE/58-201:0.70716,((Q9UYD0_PYRAB/54-184:0.18943,Y460_PYRHO/54-184:0.15738):0.32201,O27726_METTH/58-193:0.41777):0.06967):0.03328,O29122_ARCFU/1-139:0.49529):0.05346):0.10867,(Q9UWW0_SULSO/57-192:0.62905,Q9YBS3_AERPE/4-138:0.34627):0.26442):0.08547,(((O67379_AQUAE/284-421:0.24927,(Q9UZW1_PYRAB/278-415:0.28669,O29976_ARCFU/347-486:0.41851):0.12516):0.18227,Q9YBT3_AERPE/75-218:0.56681):0.03327,O27985_ARCFU/204-342:0.62171):0.20719):0.07051):0.17161):0.16599):0.33845,((O67090_AQUAE/29-172:0.58189,(((((((O13899_SCHPO/429-567:0.57372,CT155_HUMAN/137-284:0.51310):0.08424,CRD1_YEAST/98-268:0.56249):0.25009,(Q9Z7T9_CHLPN/28-161:0.29134,O84503_CHLTR/28-161:0.19129):0.51204):0.08546,PGSA_AQUAE/31-170:0.49430):0.29315,Q9X2H5_THEMA/36-169:0.39535):0.09992,Q9ZM16_HELPJ/67-196:0.39372):0.05266,(P74372_SYNY3/34-170:0.49074,((((O33288_MYCTU/63-196:0.30286,O86813_STRCO/109-242:0.13720):0.32865,Q53090_RHOSH/43-218:0.29805):0.24611,(((PGSA_PSEFL/34-175:0.39559,PGSA_ECOLI/35-173:0.22650):0.12840,PGSA_HAEIN/36-174:0.18843):0.10975,O80952_ARATH/138-289:0.46817):0.19633):0.16135,(PGSA_BACSU/47-184:0.28950,(O87532_STRPY/39-165:0.34673,((PGSA_MYCGE/78-224:0.16614,PGSA_MYCPN/70-216:0.32016):0.33304,(PGSA_RICPR/38-176:0.34709,((O84803_CHLTR/42-186:0.23035,Q9Z6V9_CHLPN/40-184:0.22757):0.33922,O51663_BORBU/44-199:0.50263):0.13458):0.05365):0.17824):0.15842):0.09350):0.06445):0.11674):0.10471):0.12837,PGSA_TREPA/46-195:0.69070):0.21790):0.13010,O28235_ARCFU/38-184:0.45370):0.56606,CPT1_YEAST/82-235:0.62787):0.19398,((Q9V6Q4_DROME/93-228:0.34601,Q9Y6K0_HUMAN/124-263:0.24422):0.13772,(Q9XW94_CAEEL/141-278:0.32862,Q19737_CAEEL/107-242:0.22809):0.20435):0.20263):0.30647,Q9SP57_BRACM/86-221:0.20886,Q39810_SOYBN/86-221:0.12170);