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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01057 alignment
(13 sequences with 370 aa)


VU94_HHV6U/225-485 KS------------------------------.---------KFLGTIEWLSDLG--IVTEDAWIRRDIR--SYMQLLTLTHGDVLIHRALSIAKKRIRATRKA-----IDFIAHIDTDFQIYE---------.---N-PVYQLFCLQSFDPILAGTILYQWLSHRGGK-KNTVSFIGPPGCGKSML----TGAILENIPLHG-.----ILHGSLNTKNLRAYGQVL----------VLWWKDISINFDNFNIIKSLLGGQKIIFPIN-...ENDHVQIGPCPIIATSCVDIRSMVH------S--NLHKINLSQRVYNFTFDKVIPR-NFPVIQKDDIN----QFLFWARNR--------SINCFIDYT
VNCS_PAVBO/183-469 LS------------------------------.-----RKQKIMAEVIQRATDGL--LLTYNDLVVHLSD--LMLMLEGMPGGSKTAEQLLTMIHIKLCAKYNA-----YEFMLMKTPATQNMNPGAPHYDCQ.--GN-LVFKLLNLQGYNPWQVGHWLVMMLSKKTGK-RNSTLFYGPASTGKTNL----AKAICHAVGLYG-.----CVNHNNKQFPFNDAPNKM----------ILWWEECIMTTDYVEAAKCVLGGTHVRVDVK-...HKDSRELPQIPVLLSSNHDVYTVVG-GN---ATFGVHAAPLKERITQMNFMKQLPN-TFGEITPGMIS----NWLSHCAHIHQEHLSLEGFAIKWDVQ
Q88271_9VIRU/201-483 KKSKV---------------------------.V---TVRGEKFCSLVDSLIERN--IFNENKWKETDFK--EYAALSASVAGVHQIKTALTLAVSKCNSPAYL-----GEILTRPNTINFNIRE--------.---N-RIANIFLSNNYCPLYAGKMFLAWVQKQLGK-RNTIWLFGPPSTGKTNI----AMSLASAVPTYG-.----MVNWNNENFPFNDVPYKS----------IILWDEGLIKSTVVEAAKSILGGQPCRVDQK-...NKGSVEVSGTPVLITSNSDMTRVVC-GN---TVTLVHQRALKDRMVRFDLTVRCSN-ALGLIPADEAK----QWLWWAQNNACDAFTQWHLSSDHVAW
Q85116_PAVHB/204-487 PFNGK---------------------------.G---TKASIKFQTMVNWLCENR--VFTEDKWKLVDFN--QYTLLSSSHSGSFQIQSALKLAIYKATNLVPT-----STFLLHTDFEQVMCIK--------.--DN-KIVKLLLCQNYDPLLVGQHVLKWIDKKCGK-KNTLWFYGPPSTGKTNL----AMAIAKSVPVYG-.----MVNWNNENFPFNDVAGKS----------LVVWDEGIIKSTIVEAAKAILGGQPTRVDQK-...MRGSVAVPGVPVVITSNGDITFVVS-GN---TTTTVHAKALKERMVKLNFTVRCSP-DMGLLTEADVQ----QWLTWCNAQSWDHYENWAINYTFDFP
P87583_9VIRU/225-500 KT------------------------------.-----KASDEFYTLCHWLAQEG--ILTEPAWRQRDLD--GYVRMHTSTQGRQQVVSALAMAKNIILDSIPN-----SVFATKAEVVTELCFE--------.--SN-RCVRLLRTQGYDPVQFGCWVLRWLDRKTGK-KNTIWFYGVATTGKTNL----ANAIAHSLPCYG-.----CVNWTNENFPFNDAPDKC----------VLFWDEGRVTAKIVESVKAVLGGQDIRVDQK-...CKGSSFLRATPVIITSNGDMTVVRD-GN---TTTFAHRPAFKDRMVRLNFDVRLPN-DFGLITPTEVR----EWLRYCKEQGDDY---EFPDQMYQFP
Q67665_9VIRU/219-487 SN------------------------------.-----RAAKNYSNLVDWLIEMG--ITSEKQWLTENRE--SYRSFQATSSNNRQVKAALENARAEMLLTKTA-----TDYLIGKDPVLDITK---------.---N-RVYQILKMNNYNPQYIGSILCGWVKREFNK-RNAIWLYGPATTGKTNI----AEAIAHAVPFYG-.----CVNWTNENFPFNDCVDKM----------LIWWEEGKMTNKVVESAKAILGGSAVRVDQK-...CKGSVCIEPTPVIITSNTDMCMIVD-GN---STTMEHRIPLEERMFQIVLSHKLEP-SFGKISKKEVR----EFFKWANDN--------LVPVVSEFK
O41854_9VIRU/217-485 RS------------------------------.-----KTSARYMELVGWLVDRG--ITSEKQWIQEDQA--SYISFNAASNSRSQIKAALDNASKIMSLTKTA-----PDYLVGQNPPEDISS---------.---N-RIYRILEMNGYDPQYAASVFLGWAQKKFGK-RNTIWLFGPATTGKTNI----AEAIAHAVPFYG-.----CVNWTNENFPFNDCVDKM----------VIWWEEGKMTAKVVESAKAILGGSKVRVDQK-...CKSSAQIDPTPVIVTSNTNMCAVID-GN---STTFEHQQPLQDRMFKFELTKRLEH-DFGKVTKQEVK----DFFRWASDH--------VTEVTHEFY
VNCS_ADVG/281-581 TDQTDSATTKTGTSLIWKSCATKVTSKKEVANpVQQPSKKLYSAQSTLDALFNVG--CFTPEDMIIKQSD--KYLELSLEPNGPQKINTLLHMNQVKTSTMITA-----FDCIIKFNEEEDDKP---------.------LLATIKDMGLNEQYLKKVLCTILTKQGGK-RGCIWFYGPGGTGKTLL----ASLICKATVNYG-.----MVTTSNPNFPWTDCGNRN----------IIWAEECGNFGNWVEDFKAITGGGDVKVDTK-...NKQPQSIKG-CVIVTSNTNITKVTV-GC---VETNAHAEPLKQRMIKIRCMKTINP-KTKITPGMLKR----WLNTWDRQP---------IQLSHEMP
P88899_9VIRU/269-550 QEAKR---------------------------.GRIQTRKEVSIKTTLKELVHKR--VTSPEDWMMMQPD--SYIEMMAQPGGENLLKNTLEICTLTLARTKTA-----FDLILEKAETSKLANFS-----MA.--ST-RTCRIFAEHGWNYIKVCHAICCVLNRQGGK-RNTVLFHGPASTGKSII----AQAIAQGVGNVG-.----CYNAANVNFPFNDCTNKN----------LIWVEEAGNFGQQVNQFKAICFGQTIRIDQK-...GKGSKQIEPTPVIMTTNENITVVRI-GC---EERPEHTQPIRDRMLNIHLTRTLPG-DFGLVDKHEWP----LICAWLVKN--------GYQSTMACY
Q89621_ADEG1/1-276 MS------------------------------.-----RESERYWTLVHALIDRG--VVSREQWQMVDPA--QYQFYHRSKQRGFKVRHILRDVIRHMCWSRTL-----LDYMSSASTPSPDDVL--------.--RN-PLYQLLLCNGYNPAVVGTALIRWAGHQSN--RNTVWIRGTPMSGAPYL----AQAIAYCSPLVG-.----SVDWRNKSNPFEGCPDSL----------VFWWDGGYVYDCCVGLVKQVFRGEHVILPPEGlrgPNPCSELFRTPVLMYSQADICMTRLRSG---ELSAEHAVGLRDCMYLIRLTEDFD--CAGGISCADVK----QFVAWSREHPG------EVRETHELK
VNCS_BMDNV/288-649 NHKEVFQADKQARDEFFTSFVHIGNVHSLIGG.IGLGTKNLVEEHVLGKPLYGMGKRKSTEKDWAKIKRINRARAARRENQENQPDIREFGHVAGQNINADQEVNLADFPDFLQDFDAEAGPSGTQPVETAQQsPPTMSEDIQPMETVGATDTGGGAQVDPRTGGQAAG-GSEMGAGGSANDGREDIFSGAPQPNQHHTLVYGKsYHFTITKWFTEFRHLATTNSGYYAQQRFKHIHGIPWERLLMYVSEGELLRMFRDYTSLKVEEVV...CEVYSLGVRLPFVTSATTSSVANAN-AQY--PIDVFHFDEAYETNYGINNVADIINKALGTEWKNATRPTAPVTTAWSEQFPNISASSTSRDINNPVI
VNCS_AEDEB/252-555 ESKKHKG-------------------------.SNNQQNIQEQSSTTAIADGHDI--VDGELDGRSESNRETAYYTFVLHKNNCKEDWRYIATTRAKQAPSFIT-----FDHGDHIHILFSSSNTG-------.--GNSTRVRTRITKFLSATSAGNAEATITFSKVKFLRNYILYCIRYGIETVNIYG--NKIQQQLTEAMD-.----TFKVLFENRDPNDVILDAGC--------KLYHEEKKEYQQKRCGQRKQQNLTDIILDKIK...EKKITTAQQWENIIEPEFKIQLMKEFGLNVDSYVQRIVRIERTRIQQIIKSKTLTEIMVEILNEEYIK----NFTPGEDNSKLQNIIQWIEYMFKENN
VNCS_JCDNV/222-483 RE------------------------------.-------MVSSSDCTDYYECEQ-----QEHKISRRSD--AGSSNGRLYEKKAYSAGKFAYIRKKTKALLRK------YYVSPVSAICDVPE---------.-----FRDDDLLCDPKNRDYIQAACDDFGKDLNAMSLREIYNLLTEDYNFTDE----QE-LNPYALFIS-.----SMKYDNLENSLNIIIELL------------KFQCNDDEDLIVEFLTNLVNVLDRRIPKL-...-NAFLIISPPSAGKNFFFDMIFGLLLSYGQLGQANRHNLFAFQEAPNKRVLLWNEP-NYESSLTDTIK----MMFGGDPYT---------VRVKNRMD