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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01055 phylogeny
for restricted amino acid alignment


 
(((((((((((Q7PWY6_ANOGA/333-748,Q9VBR6_DROME/223-656),((((Q84IQ3_BACGO/362-832,Q8Y4J2_LISMO/363-830),(Q8RQV2_BACGO/643-1110,Q8YAE8_LISMO/552-1015)),((((((YICI_ECOLI/240-669,Q8CK39_STRCO/240-669),Q9WYE4_THEMA/234-663),(Q97K36_CLOAB/237-666,Q9KBM1_BACHD/239-668)),P96793_LACPE/238-674),Q8AAX3_BACTN/283-715),(Q8A370_BACTN/202-632,Q7VV73_BORPE/228-663))),((Q83IV2_SHIFL/205-670,Q8UAT2_AGRT5/188-655),Q8F233_LEPIN/239-706))),((((Q8DWF5_STRMU/161-586,(Q8DR83_STRR6/154-576,(Q7S081_NEUCR/556-986,(Q8G4P4_BIFLO/239-664,Q8G6V8_BIFLO/46-475)))),(Q833V2_ENTFA/273-709,Q8XLJ5_CLOPE/269-681)),(((Q8Z9N4_SALTI/216-673,(Q8KU83_ENTFA/221-677,Q9KB73_BACHD/197-652)),Q82K34_STRAW/182-638),((XYLS_SULSO/192-622,Q8A1K2_BACTN/221-712),(Q8P9U2_XANCP/365-822,Q9AA19_CAUCR/411-869)))),((Q84IQ2_BACGO/234-702,Q8Y4J4_LISMO/266-736),Q97F62_CLOAB/244-674))),(Q8A369_BACTN/235-684,Q9AQR9_BACTQ/211-640)),((Q9KEZ5_BACHD/245-690,Q8Y0G3_RALSO/243-687),Q8R8R1_THETN/244-690)),((AGLU_TETPY/276-791,(((((Q19004_CAEEL/280-784,(Q20722_CAEEL/270-712,Q21750_CAEEL/268-779)),(MGA_HUMAN/1214-1716,(SUIS_RAT/1199-1704,(SUIS_RABIT/1194-1690,SUIS_SUNMU/1180-1676)))),Q9NFY8_PENVA/284-784),(O73626_COTJA/338-805,(O73632_COTJA/278-745,Q8IWE7_HUMAN/340-824))),((((AGLU_CANTS/323-936,(((AMYG_CANAL/278-821,AMYG_DEBOC/288-833),((AGLU_ASPNG/306-855,Q9UV08_EMENI/316-865),Q7SHN5_NEUCR/317-872)),(AGLU_SCHPO/289-841,YFZB_SCHPO/305-863))),(Q7S1M6_NEUCR/239-765,(Q7S3A8_NEUCR/255-813,Q9C1S7_EMENI/260-835))),(Q876Z7_9ZYGO/353-852,AGLU_MUCJA/251-762)),(((Q8VWV9_PINPS/262-751,((Q9LEC9_SOLTU/274-767,Q9ZP04_TROMA/283-774),Q9LGC6_ORYSA/272-764)),(((AGLU_SPIOL/289-756,AGLU_BETVU/293-760),O22444_ARATH/283-750),AGLU_HORVU/258-726)),Q9AVC3_PHYPA/275-767)))),((Q8NIY3_NEUCR/393-841,(YB79_YEAST/361-809,Q9US55_SCHPO/347-792)),(((O24375_SOLTU/339-783,Q9FN05_ARATH/335-779),(Q94502_DICDI/363-810,(GA2A_MOUSE/365-810,GANC_HUMAN/334-779))),((Q7Q4V0_ANOGA/354-804,Q9Y146_DROME/343-792),Q9U3F8_CAEEL/325-772))))),(((Q8A2K6_BACTN/146-577,Q93Y12_ARATH/175-606),(Q7NP60_GLOVI/228-678,Q8YN00_ANASP/228-678)),(((Q8XIN9_CLOPE/226-669,Q8RDL1_THETN/203-645),Q88SA1_LACPL/231-671),(Q8YAE7_LISMO/229-670,(AGL2_BACTQ/233-674,Q9RHZ2_ALIAC/187-628))))),((Q8XHY5_CLOPE/140-621,(Q978U0_THEVO/265-697,Q9HLD0_THEAC/235-667)),((Q7NKE3_GLOVI/259-701,Q8YLG7_ANASP/262-705),(Q827F5_STRAW/270-712,Q9KZN8_STRCO/273-715)))),((AGLU_SULSO/148-608,Q96XI8_SULTO/143-586),Q8ZW54_PYRAE/153-612)),Q9UVZ1_9PEZI/317-882),Q9STC0_9FLOR/381-935,Q9STC2_9FLOR/377-936);
(((((((((((Q7PWY6_ANOGA/333-748:0.97799,Q9VBR6_DROME/223-656:0.82391):0.50805,((((Q84IQ3_BACGO/362-832:0.22330,Q8Y4J2_LISMO/363-830:0.27197):0.26495,(Q8RQV2_BACGO/643-1110:0.32353,Q8YAE8_LISMO/552-1015:0.26231):0.16954):0.47557,((((((YICI_ECOLI/240-669:0.25508,Q8CK39_STRCO/240-669:0.23496):0.05448,Q9WYE4_THEMA/234-663:0.22016):0.04499,(Q97K36_CLOAB/237-666:0.21190,Q9KBM1_BACHD/239-668:0.17240):0.06490):0.13098,P96793_LACPE/238-674:0.31671):0.28428,Q8AAX3_BACTN/283-715:0.58869):0.16966,(Q8A370_BACTN/202-632:1.06853,Q7VV73_BORPE/228-663:1.02416):0.18426):0.04521):0.09244,((Q83IV2_SHIFL/205-670:0.32190,Q8UAT2_AGRT5/188-655:0.48400):0.14980,Q8F233_LEPIN/239-706:0.43476):0.75320):0.07790):0.14132,((((Q8DWF5_STRMU/161-586:0.35292,(Q8DR83_STRR6/154-576:0.23346,(Q7S081_NEUCR/556-986:0.38047,(Q8G4P4_BIFLO/239-664:0.26792,Q8G6V8_BIFLO/46-475:0.16990):0.15471):0.12490):0.07484):0.73997,(Q833V2_ENTFA/273-709:0.26403,Q8XLJ5_CLOPE/269-681:0.25871):0.96230):0.13247,(((Q8Z9N4_SALTI/216-673:0.27545,(Q8KU83_ENTFA/221-677:0.52847,Q9KB73_BACHD/197-652:0.21653):0.06110):0.13545,Q82K34_STRAW/182-638:0.29221):0.32530,((XYLS_SULSO/192-622:0.43655,Q8A1K2_BACTN/221-712:0.48600):0.09536,(Q8P9U2_XANCP/365-822:0.21455,Q9AA19_CAUCR/411-869:0.21253):0.32148):0.19378):0.14967):0.09298,((Q84IQ2_BACGO/234-702:0.16377,Q8Y4J4_LISMO/266-736:0.27389):0.23086,Q97F62_CLOAB/244-674:0.29326):0.66662):0.12507):0.04502,(Q8A369_BACTN/235-684:0.66889,Q9AQR9_BACTQ/211-640:0.49477):0.09723):0.14890,((Q9KEZ5_BACHD/245-690:0.22350,Q8Y0G3_RALSO/243-687:0.40640):0.08657,Q8R8R1_THETN/244-690:0.31729):0.63980):0.11149,((AGLU_TETPY/276-791:0.84700,(((((Q19004_CAEEL/280-784:0.29940,(Q20722_CAEEL/270-712:0.16174,Q21750_CAEEL/268-779:0.12478):0.18754):0.37719,(MGA_HUMAN/1214-1716:0.17133,(SUIS_RAT/1199-1704:0.21116,(SUIS_RABIT/1194-1690:0.12833,SUIS_SUNMU/1180-1676:0.14556):0.02516):0.15656):0.31046):0.05124,Q9NFY8_PENVA/284-784:0.52693):0.12786,(O73626_COTJA/338-805:0.29896,(O73632_COTJA/278-745:0.12722,Q8IWE7_HUMAN/340-824:0.16277):0.21142):0.19170):0.12726,((((AGLU_CANTS/323-936:0.64570,(((AMYG_CANAL/278-821:0.15555,AMYG_DEBOC/288-833:0.15441):0.17624,((AGLU_ASPNG/306-855:0.11265,Q9UV08_EMENI/316-865:0.12010):0.15668,Q7SHN5_NEUCR/317-872:0.24904):0.10661):0.09906,(AGLU_SCHPO/289-841:0.23754,YFZB_SCHPO/305-863:0.20470):0.20971):0.17510):0.12349,(Q7S1M6_NEUCR/239-765:0.43035,(Q7S3A8_NEUCR/255-813:0.28322,Q9C1S7_EMENI/260-835:0.36889):0.21730):0.27067):0.06544,(Q876Z7_9ZYGO/353-852:0.49857,AGLU_MUCJA/251-762:0.45884):0.12198):0.07932,(((Q8VWV9_PINPS/262-751:0.13186,((Q9LEC9_SOLTU/274-767:0.11911,Q9ZP04_TROMA/283-774:0.10866):0.09023,Q9LGC6_ORYSA/272-764:0.13539):0.11090):0.15061,(((AGLU_SPIOL/289-756:0.14117,AGLU_BETVU/293-760:0.19711):0.09346,O22444_ARATH/283-750:0.17191):0.05563,AGLU_HORVU/258-726:0.26928):0.12529):0.07557,Q9AVC3_PHYPA/275-767:0.28536):0.18691):0.04599):0.07383):0.29556,((Q8NIY3_NEUCR/393-841:0.31891,(YB79_YEAST/361-809:0.51789,Q9US55_SCHPO/347-792:0.34465):0.07909):0.14412,(((O24375_SOLTU/339-783:0.14970,Q9FN05_ARATH/335-779:0.10199):0.25208,(Q94502_DICDI/363-810:0.29009,(GA2A_MOUSE/365-810:0.27573,GANC_HUMAN/334-779:0.24640):0.08061):0.03519):0.04261,((Q7Q4V0_ANOGA/354-804:0.21642,Q9Y146_DROME/343-792:0.23403):0.22799,Q9U3F8_CAEEL/325-772:0.39835):0.07237):0.07714):0.30203):0.10228):0.06862,(((Q8A2K6_BACTN/146-577:0.38528,Q93Y12_ARATH/175-606:0.32969):0.32508,(Q7NP60_GLOVI/228-678:0.18572,Q8YN00_ANASP/228-678:0.15845):0.29927):0.09717,(((Q8XIN9_CLOPE/226-669:0.45429,Q8RDL1_THETN/203-645:0.31705):0.07008,Q88SA1_LACPL/231-671:0.50018):0.06306,(Q8YAE7_LISMO/229-670:0.38657,(AGL2_BACTQ/233-674:0.21182,Q9RHZ2_ALIAC/187-628:0.30626):0.09109):0.07767):0.05557):0.08830):0.06237,((Q8XHY5_CLOPE/140-621:0.65760,(Q978U0_THEVO/265-697:0.19971,Q9HLD0_THEAC/235-667:0.22388):0.28816):0.19467,((Q7NKE3_GLOVI/259-701:0.26000,Q8YLG7_ANASP/262-705:0.25809):0.14855,(Q827F5_STRAW/270-712:0.10151,Q9KZN8_STRCO/273-715:0.18950):0.48469):0.20042):0.13804):0.04250,((AGLU_SULSO/148-608:0.22253,Q96XI8_SULTO/143-586:0.17345):0.29479,Q8ZW54_PYRAE/153-612:0.53156):0.29875):0.39109,Q9UVZ1_9PEZI/317-882:0.69302):0.91198,Q9STC0_9FLOR/381-935:0.16643,Q9STC2_9FLOR/377-936:0.06008);