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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01055 phylogeny
for nucleotide alignment


 
((((((((((Q9KEZ5_BACHD/245-690,Q8Y0G3_RALSO/243-687),Q8R8R1_THETN/244-690),((AGLU_SULSO/148-608,Q96XI8_SULTO/143-586),Q8ZW54_PYRAE/153-612)),((((Q978U0_THEVO/265-697,Q9HLD0_THEAC/235-667),((Q7NKE3_GLOVI/259-701,(Q827F5_STRAW/270-712,Q9KZN8_STRCO/273-715)),Q8YLG7_ANASP/262-705)),(((((Q8A370_BACTN/202-632,((Q84IQ3_BACGO/362-832,Q8Y4J2_LISMO/363-830),(Q8RQV2_BACGO/643-1110,Q8YAE8_LISMO/552-1015))),((((Q97K36_CLOAB/237-666,Q9KBM1_BACHD/239-668),((Q9WYE4_THEMA/234-663,Q8CK39_STRCO/240-669),YICI_ECOLI/240-669)),P96793_LACPE/238-674),Q8AAX3_BACTN/283-715)),(((((Q8G4P4_BIFLO/239-664,Q8G6V8_BIFLO/46-475),(Q7S081_NEUCR/556-986,(Q8DWF5_STRMU/161-586,Q8DR83_STRR6/154-576))),(((Q8P9U2_XANCP/365-822,Q9AA19_CAUCR/411-869),(XYLS_SULSO/192-622,Q8A1K2_BACTN/221-712)),(Q82K34_STRAW/182-638,((Q8KU83_ENTFA/221-677,Q9KB73_BACHD/197-652),Q8Z9N4_SALTI/216-673)))),Q7VV73_BORPE/228-663),((Q7PWY6_ANOGA/333-748,Q9VBR6_DROME/223-656),((Q83IV2_SHIFL/205-670,Q8F233_LEPIN/239-706),Q8UAT2_AGRT5/188-655)))),(Q8A369_BACTN/235-684,(((Q84IQ2_BACGO/234-702,Q8Y4J4_LISMO/266-736),Q97F62_CLOAB/244-674),(Q833V2_ENTFA/273-709,Q8XLJ5_CLOPE/269-681)))),Q9AQR9_BACTQ/211-640)),(((AGLU_TETPY/276-791,(((AMYG_CANAL/278-821,AMYG_DEBOC/288-833),(AGLU_SCHPO/289-841,YFZB_SCHPO/305-863)),((AGLU_ASPNG/306-855,Q9UV08_EMENI/316-865),Q7SHN5_NEUCR/317-872))),(((((((AGLU_SPIOL/289-756,AGLU_BETVU/293-760),O22444_ARATH/283-750),AGLU_HORVU/258-726),((((Q9LEC9_SOLTU/274-767,Q9ZP04_TROMA/283-774),Q9LGC6_ORYSA/272-764),Q8VWV9_PINPS/262-751),Q9AVC3_PHYPA/275-767)),((O73626_COTJA/338-805,(O73632_COTJA/278-745,Q8IWE7_HUMAN/340-824)),(((Q19004_CAEEL/280-784,(Q20722_CAEEL/270-712,Q21750_CAEEL/268-779)),(MGA_HUMAN/1214-1716,(SUIS_SUNMU/1180-1676,(SUIS_RABIT/1194-1690,SUIS_RAT/1199-1704)))),Q9NFY8_PENVA/284-784))),(Q7S1M6_NEUCR/239-765,(Q7S3A8_NEUCR/255-813,Q9C1S7_EMENI/260-835))),(Q876Z7_9ZYGO/353-852,(AGLU_CANTS/323-936,AGLU_MUCJA/251-762)))),((Q8NIY3_NEUCR/393-841,(YB79_YEAST/361-809,Q9US55_SCHPO/347-792)),(((Q7Q4V0_ANOGA/354-804,Q9Y146_DROME/343-792),(GA2A_MOUSE/365-810,GANC_HUMAN/334-779)),((O24375_SOLTU/339-783,Q9FN05_ARATH/335-779),(Q94502_DICDI/363-810,Q9U3F8_CAEEL/325-772))))))),((Q8A2K6_BACTN/146-577,Q93Y12_ARATH/175-606),(Q7NP60_GLOVI/228-678,Q8YN00_ANASP/228-678))),(AGL2_BACTQ/233-674,Q9RHZ2_ALIAC/187-628)),(((Q8XHY5_CLOPE/140-621,Q8XIN9_CLOPE/226-669),Q8RDL1_THETN/203-645),Q8YAE7_LISMO/229-670)),Q88SA1_LACPL/231-671),Q9UVZ1_9PEZI/317-882),Q9STC0_9FLOR/381-935,Q9STC2_9FLOR/377-936);
((((((((((Q9KEZ5_BACHD/245-690:0.18223,Q8Y0G3_RALSO/243-687:0.47252):0.08341,Q8R8R1_THETN/244-690:0.32992):0.31913,((AGLU_SULSO/148-608:0.22492,Q96XI8_SULTO/143-586:0.19111):0.24145,Q8ZW54_PYRAE/153-612:0.43918):0.12327):0.12764,((((Q978U0_THEVO/265-697:0.25344,Q9HLD0_THEAC/235-667:0.22874):0.28425,((Q7NKE3_GLOVI/259-701:0.17891,(Q827F5_STRAW/270-712:0.10399,Q9KZN8_STRCO/273-715:0.14023):0.34340):0.17023,Q8YLG7_ANASP/262-705:0.29899):0.10710):0.10624,(((((Q8A370_BACTN/202-632:0.77874,((Q84IQ3_BACGO/362-832:0.24092,Q8Y4J2_LISMO/363-830:0.34936):0.14297,(Q8RQV2_BACGO/643-1110:0.30905,Q8YAE8_LISMO/552-1015:0.28665):0.08286):0.20401):0.08580,((((Q97K36_CLOAB/237-666:0.29640,Q9KBM1_BACHD/239-668:0.18480):0.10830,((Q9WYE4_THEMA/234-663:0.24978,Q8CK39_STRCO/240-669:0.24457):0.08905,YICI_ECOLI/240-669:0.21125):0.07238):0.07980,P96793_LACPE/238-674:0.34333):0.15185,Q8AAX3_BACTN/283-715:0.44121):0.13998):0.07509,(((((Q8G4P4_BIFLO/239-664:0.23908,Q8G6V8_BIFLO/46-475:0.17501):0.10097,(Q7S081_NEUCR/556-986:0.22675,(Q8DWF5_STRMU/161-586:0.33290,Q8DR83_STRR6/154-576:0.25219):0.27268):0.07306):0.39263,(((Q8P9U2_XANCP/365-822:0.17693,Q9AA19_CAUCR/411-869:0.14787):0.15761,(XYLS_SULSO/192-622:0.54385,Q8A1K2_BACTN/221-712:0.34687):0.10986):0.10254,(Q82K34_STRAW/182-638:0.23482,((Q8KU83_ENTFA/221-677:0.44973,Q9KB73_BACHD/197-652:0.16421):0.18615,Q8Z9N4_SALTI/216-673:0.21061):0.15956):0.16324):0.07672):0.04694,Q7VV73_BORPE/228-663:0.62058):0.09124,((Q7PWY6_ANOGA/333-748:0.65486,Q9VBR6_DROME/223-656:0.53239):0.17653,((Q83IV2_SHIFL/205-670:0.24061,Q8F233_LEPIN/239-706:0.56530):0.08655,Q8UAT2_AGRT5/188-655:0.33080):0.32709):0.07270):0.08023):0.11464,(Q8A369_BACTN/235-684:0.45550,(((Q84IQ2_BACGO/234-702:0.30734,Q8Y4J4_LISMO/266-736:0.26015):0.11477,Q97F62_CLOAB/244-674:0.31719):0.26680,(Q833V2_ENTFA/273-709:0.27422,Q8XLJ5_CLOPE/269-681:0.24740):0.48171):0.14335):0.08667):0.05570,Q9AQR9_BACTQ/211-640:0.42827):0.10051):0.05990,(((AGLU_TETPY/276-791:0.54200,(((AMYG_CANAL/278-821:0.13674,AMYG_DEBOC/288-833:0.17187):0.17305,(AGLU_SCHPO/289-841:0.21819,YFZB_SCHPO/305-863:0.24675):0.18832):0.05979,((AGLU_ASPNG/306-855:0.14993,Q9UV08_EMENI/316-865:0.18716):0.12826,Q7SHN5_NEUCR/317-872:0.25857):0.10915):0.12082):0.07612,(((((((AGLU_SPIOL/289-756:0.13134,AGLU_BETVU/293-760:0.16909):0.13958,O22444_ARATH/283-750:0.16387):0.17634,AGLU_HORVU/258-726:0.23830):0.06419,((((Q9LEC9_SOLTU/274-767:0.19865,Q9ZP04_TROMA/283-774:0.13680):0.16197,Q9LGC6_ORYSA/272-764:0.14987):0.09521,Q8VWV9_PINPS/262-751:0.17872):0.09992,Q9AVC3_PHYPA/275-767:0.30602):0.04716):0.11160,((O73626_COTJA/338-805:0.20682,(O73632_COTJA/278-745:0.14283,Q8IWE7_HUMAN/340-824:0.13914):0.13944):0.17016,(((Q19004_CAEEL/280-784:0.25396,(Q20722_CAEEL/270-712:0.21241,Q21750_CAEEL/268-779:0.16804):0.12974):0.31701,(MGA_HUMAN/1214-1716:0.18481,(SUIS_SUNMU/1180-1676:0.09985,(SUIS_RABIT/1194-1690:0.08696,SUIS_RAT/1199-1704:0.19870):0.03759):0.19241):0.15507):0.13138,Q9NFY8_PENVA/284-784:0.35903):0.07799):0.10145):0.07867,(Q7S1M6_NEUCR/239-765:0.38174,(Q7S3A8_NEUCR/255-813:0.24946,Q9C1S7_EMENI/260-835:0.32750):0.12056):0.18620):0.03925,(Q876Z7_9ZYGO/353-852:0.41236,(AGLU_CANTS/323-936:0.47368,AGLU_MUCJA/251-762:0.35139):0.06217):0.05172):0.07860):0.17452,((Q8NIY3_NEUCR/393-841:0.31296,(YB79_YEAST/361-809:0.42818,Q9US55_SCHPO/347-792:0.30354):0.08750):0.06986,(((Q7Q4V0_ANOGA/354-804:0.27568,Q9Y146_DROME/343-792:0.19865):0.20520,(GA2A_MOUSE/365-810:0.24965,GANC_HUMAN/334-779:0.23437):0.07433):0.06742,((O24375_SOLTU/339-783:0.16770,Q9FN05_ARATH/335-779:0.13205):0.18767,(Q94502_DICDI/363-810:0.23322,Q9U3F8_CAEEL/325-772:0.32921):0.06983):0.10243):0.04051):0.17872):0.10372):0.05868):0.07239,((Q8A2K6_BACTN/146-577:0.35137,Q93Y12_ARATH/175-606:0.31393):0.19315,(Q7NP60_GLOVI/228-678:0.26938,Q8YN00_ANASP/228-678:0.20615):0.17524):0.08130):0.06185,(AGL2_BACTQ/233-674:0.21889,Q9RHZ2_ALIAC/187-628:0.32305):0.12000):0.05817,(((Q8XHY5_CLOPE/140-621:0.44514,Q8XIN9_CLOPE/226-669:0.25348):0.08897,Q8RDL1_THETN/203-645:0.28444):0.10114,Q8YAE7_LISMO/229-670:0.30129):0.06911):0.08009,Q88SA1_LACPL/231-671:0.31418):0.18719,Q9UVZ1_9PEZI/317-882:0.53112):0.51797,Q9STC0_9FLOR/381-935:0.17442,Q9STC2_9FLOR/377-936:0.09464);