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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01054 - MMTV_SAg)
Mouse mammary tumour virus superantigen
(Pfam reference: accession no. PF01054)
(Interpro reference: accession no. IPR001213)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 315 aa
(ave. pairwise identity: 0.87)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.39)
nucleotides
(available for above)
5 sequences @ 945 bp
(ave. pairwise identity: 0.91)
New Hampshire format
(total tree length: 0.24)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 315 aa
(ave. pairwise identity: 0.87)
New Hampshire format
(total tree length: 0.39)