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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01049 - Cadherin_C)
Cadherin cytoplasmic region
(Pfam reference: accession no. PF01049)
(Interpro reference: accession no. IPR000233)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
20 sequences @ 169 aa
(ave. pairwise identity: 0.51)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 7.60)
nucleotides
(available for above)
19 sequences @ 507 bp
(ave. pairwise identity: 0.54)
New Hampshire format
(total tree length: 6.37)
amino acids, restricted set
(corresp. to available nt seqs)
19 sequences @ 169 aa
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 7.44)