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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01042 phylogeny
for restricted amino acid alignment


 
(((((((ALDR_LACLA/6-124,Y709_SYNY3/8-128),YABJ_BACSU/6-123),(((Y142_LEUMC/8-130,Y364_AQUAE/6-125),((Y322_HAEDU/1-114,Y1627_HAEIN/2-116),Q07261_YEAST/287-418)),(MMF1_SCHPO/41-162,(HMF1_YEAST/10-127,MMF1_YEAST/26-143)))),((DFRA_MYXXA/11-131,YVN1_AZOVI/8-126),(Y4SK_RHISN/7-125,(YSD2_CAEEL/19-136,Y944_HELPJ/7-125)))),TDCF_ECOLI/7-127),((Q9ZBJ6_STRCO/11-130,(O85956_SPHAR/13-126,(((Q55925_SYNY3/86-202,YJGH_ECOLI/11-128),Q44518_ANAVA/58-181),(O07205_MYCTU/10-121,O86529_STRCO/11-131)))),YCDK_ECOLI/10-126)),O69646_MYCTU/16-150,O96876_TRYCR/22-158);
(((((((ALDR_LACLA/6-124:0.49697,Y709_SYNY3/8-128:0.32825):0.12284,YABJ_BACSU/6-123:0.17721):0.07517,(((Y142_LEUMC/8-130:0.39919,Y364_AQUAE/6-125:0.44923):0.11959,((Y322_HAEDU/1-114:0.43317,Y1627_HAEIN/2-116:0.17508):0.68428,Q07261_YEAST/287-418:1.04240):0.24860):0.08960,(MMF1_SCHPO/41-162:0.43570,(HMF1_YEAST/10-127:0.17068,MMF1_YEAST/26-143:0.14330):0.26253):0.13546):0.11724):0.08018,((DFRA_MYXXA/11-131:0.29933,YVN1_AZOVI/8-126:0.33459):0.12601,(Y4SK_RHISN/7-125:0.41790,(YSD2_CAEEL/19-136:0.24179,Y944_HELPJ/7-125:0.44010):0.10855):0.14270):0.13356):0.02024,TDCF_ECOLI/7-127:0.50135):0.12321,((Q9ZBJ6_STRCO/11-130:0.55108,(O85956_SPHAR/13-126:1.06261,(((Q55925_SYNY3/86-202:0.93438,YJGH_ECOLI/11-128:0.64825):0.24830,Q44518_ANAVA/58-181:1.02850):0.11783,(O07205_MYCTU/10-121:0.57171,O86529_STRCO/11-131:0.97247):0.31358):0.16520):0.08412):0.08662,YCDK_ECOLI/10-126:0.83511):0.09995):1.04948,O69646_MYCTU/16-150:0.24661,O96876_TRYCR/22-158:0.62976);