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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01042 alignment |
| Q07261_YEAST/287-418 | TQNLPKqQAktgeqrfenhmSNALPQ-TTInKTNDKLYISNLQS---....-----RKSETVEKQSEDIFTELADILHSNQIPRNH--.-.-ILSASLLIRDMSN.FGKINKIYNEFLDLS-.--KYGPLPPSRACVGSKCLP-..EDCHVQLSVVVDV |
| YOAB_ECOLI/2-114 | TIVRI-.DA...........EARWSDVVIH.--NNTLYYTG-VPENL....-------DADAFEQTANTLAQIDAVLEKQGSNKSS--.-.-ILDATIFLADKND.FAAMNKAWDAWVVAG-.------HAPVRCTVQAGLMN-..PKYKVEIKIVAAV |
| Y1627_HAEIN/2-116 | TIQRI-.LP...........SARLSEVSIH.--NNLAYFAGQVP---....---ELTIEQNAYEQTKEVLGLIDKLLAKIGSNKSN--.-.-ILTAQIFLADMKD.YAQLNQAWDEWVDHV-.------SPPSRATVEAKLAD-..PHWKVEIVIIATC |
| Y322_HAEDU/1-114 | MITRI-.DV...........TNRFSEVAIY.--NGIAYFAGQVPTDE....-------SKDAYQQTQQVLSEIDKYLAKSNTDKSR--.-.-ILMATVYLANMAD.YTEMNRAWDEWVAPN-.------NAPPRAAIEARLAN-..PNWKVEIVITAAI |
| O96876_TRYCR/22-158 | AAAAP-.--...........ATNYVS-YVC.-SGMQLHVSGQLPKNDvggcMTGQLGASLTVTEGQAAARACALQVVSQMQAALGDLDrVkRVVKLNVFVNSSPS.FTEQSYVANGASDLILsVFGEEVGRHARCAVGVAQLP-..FGAAVEVDALVEL |
| O69646_MYCTU/16-150 | QVAAP-.--...........LAAYVP-AVR.-TGNLVYTAGQLPLEAgklvRTGKLGADVNPEEGKTLARICALNALAAVD-SLVDLDaVtRVVKVVGFVASAPG.FHGQPSVINGASDLLAeVF-GDSGAHARSAVGVSELP-..LDAPVEVELIVEV |
| YJGH_ECOLI/11-128 | GRHSL-.YA...........EHRYSA-AIR.-SGDLLFVSGQVGSRE....DGTP---EPDFQQQVRLAFDNLHATLAAAGCTFDD--.-.-IIDVTSFHTDPENqFEDIMTVKNEIFSAP-.------PYPNWTAVGVTWLA-..-GFDFEIKVIARI |
| Q55925_SYNY3/86-202 | MLNEL-.--...........--HYSQ-AVK.-IGDRVETSGQGGWD-....--DNLQIPELLADEIAQAFQNIERTLAAAGAGWEH--.-.-VVHVNSYHVGGLP.-PEVNDVMVRLYRHY-.---MPNHAPIWTQVGVAALGL..PTMRIEIRVTAIV |
| Q44518_ANAVA/58-181 | PTLYD-.AT...........RNGYSHIAVTpAKSRTVYISGQFGSDL....QGNLV--SPEFEPQLIRAFQNLRFALDAVGAKPSD--.-.-VVKTTVLIVDHTQ.--DKLIPLGRQIQNL-.---WPFRPPANTLIPVPRLAL..DGMLFEIDAYAVI |
| YCDK_ECOLI/10-126 | GSSAP-.--...........LAPFVP-GTL.-ADGVVYVSGTLAFDQ....HNNVLF-ADDPKAQTRHVLETIRKVIETAGGTMAD--.-.-VTFNSIFITDWKN.YAAINEIYAEFFPGD-.---K----PARFCIQCGLVK-..PDALVEIATIAHI |
| Q9ZBJ6_STRCO/11-130 | EGVAP-.--...........AAQYTHVVLG.-TGRFVAVSGQLALD-....EDGKVVGEGDPAAQARQVFENLRRCLASAGAAFDD--.-.-VVKLTFFVTDMAN.MGAIRAARAEHIPDD-.------RLPAASAVQVAALVR..PEFLMEIEAFAVV |
| MMF1_YEAST/26-143 | TKLAP-.PA...........AASYSQ-AMK.-ANNFVYVSGQIPYTP....-DNKPV-QGSISEKAEQVFQNVKNILAESNSSLDN--.-.-IVKVNVFLADMKN.FAEFNSVYAKHFHTH-.---K----PARSCVGVASLP-..LNVDLEMEVIAVE |
| HMF1_YEAST/10-127 | CESAP-.AA...........AASYSH-AMK.-VNNLIFLSGQIPVTP....-DNKLV-EGSIADKAEQVIQNIKNVLEASNSSLDR--.-.-VVKVNIFLADINH.FAEFNSVYAKYFNTH-.---K----PARSCVAVAALP-..LGVDMEMEAIAAE |
| MMF1_SCHPO/41-162 | PINSPKlSS...........AGPYNQ-AIK.-ANGVIYCSGQIPVA-....-NGKVI-EGTVGDQTRQCLLNLQEVLTEAGSSLNK--.-.-IVKVNIFLADMDD.FAAVNKVYTEVLPDP-.---K----PARSCVAVKTVPLstQGVKIEIECIALE |
| Y364_AQUAE/6-125 | TPKAP-.VP...........VGPYSQ-AVE.-VNGFLFISGQIGINP....ETGKLV-EGFK-EQVIQIFKNVDAILEEAGLKREN--.-.-IVKVTIYITDIKK.FKELNEIYEDYFKDV-.---SVK--PARVTVGVKELP-..LNAEVEIEIVAVK |
| Y142_LEUMC/8-130 | TTTAP-.KA...........LGPYSQ-AIL.-NDNTLYISGQIGIDP....ETDEFA-GATTAEQAHQIFDNIDNILHEAEFSRND--.-.-IVKAALFFDDIAD.FALVNDIYAQYFDTT-.---SVEEFPARSAVQVAALP-..KNAKLEIEITAMK |
| Y4SK_RHISN/7-125 | TNDAP-.GA...........VGPYSQ-AIK.-VGDLLFVSGQLPIDP....ATGEFN-SANAVEQAEQCLKNLQAIARAAGTDLSK--.-.-TVKTTVLLTDLGD.FADINRVYTGFFSTP-.---Y----PARACYEVKALP-..KGAKVEIEAVISL |
| YSD2_CAEEL/19-136 | SANAP-.GA...........IGPYSQ-AVR.-AGNTIYLSGSLGLDP....KTGDL--KEGVVEQTHQSLKNLGEVLKAAGADYGN--.-.-VVKTTVLLQNIAD.FAAVNEVYGQYFKSP-.---Y----PARAAYQVAALP-..KGGLVEIEAVAIA |
| UK14_MOUSE/10-128 | TTKAP-.AA...........IGPYSQ-AVQ.-VDRTIYISGQVGLDP....SSGQLV-PGGVVEEAKQALKNLGEILKAAGCDFNN--.-.-VVKTTVLLADMND.FGTVNEIYKTYFQGS-.-------LPARAAYQVAALP-..RGSRVEIEAIAVQ |
| Y944_HELPJ/7-125 | STLAP-.KA...........IGPYSQ-AIA.-TNDLVFVSGQLGIDV....STGEFK-GADIHSQTTQSMENIKAILKEAGLGMDS--.-.-VVKTTILLKSLDD.FAVVNGIYGSYFKEP-.---Y----PARATFQVAKLP-..KDALVEIEAIAIK |
| YVN1_AZOVI/8-126 | TDKAP-.AA...........IGTYSQ-AIR.-AGDTVYLSGQIPLDP....GTMELV-EGDFEAQTVRVFENLKAVVEAAGGSFAD--.-.-IVKLNIFLTDLAH.FANGNECMGRYFAQP-.---Y----PARAAIACASLP-..RGAQVEMDGILVL |
| DFRA_MYXXA/11-131 | SDQAP-.KA...........IGPYSQ-AVQvDAGKMTFLSGQIPLDP....ATMEMV-QGDVVAQAERVMENLKAVLAASGLDFSH--.-.-VVRCTIFLTDLGD.FARVNEVYGRYFTGA-.---P----PARATVQVSALP-..RGSKVEIDAIAVS |
| YJGF_ECOLI/6-126 | TENAP-.AA...........IGPYVQ-GVD.-LGNMIITSGQIPVNP....KTGE-V-PADVAAQARQSLDNVKAIVEAAGLKVGD--.-.-IVKTTVFVKDLND.FATVNATYEAFFTEH-.---NAT-FPARSCVEVARLP-..KDVKIEIEAIAVR |
| TDCF_ECOLI/7-127 | TQRAP-.GA...........IGPYVQ-GVD.-LGSMVFTSGQIPVCP....QTGE-I-PADVQDQARLSLENVKAIVVAAGLSVGD--.-.-IIKMTVFITDLND.FATINEVYKQFFDEH-.---QAT-YPTRSCVQVARLP-..KDVKLEIEAIAVR |
| YABJ_BACSU/6-123 | TKHAP-.AA...........IGPYSQ-GII.-VNNMFYSSGQIPLTP....-SGEMV-NGDIKEQTHQVFSNLKAVLEEAGASFET--.-.-VVKATVFIADMEQ.FAEVNEVYGQYFDTH-.---K----PARSCVEVARLP-..KDALVEIEVIALV |
| Y854_PYRHO/7-125 | TENAP-.KP...........IGPYSQ-AIK.-AGNFLFIAGQIPIDP....KTGEIV-KGDIKDQTRQVLENIKAILEAAGYSLND--.-.-VIKVTVYLKDMND.FAKMNEVYAEYFGES-.---K----PARVAVEVSRLP-..KDVLIEIEAIAYK |
| Y709_SYNY3/8-128 | TAQAP-.AP...........VGPYNQ-AIA.-ANGFLFTAGQIALDP....QTMTIMGEGNVEVQAKQVLTNLGAVLQEAGCGWEN--.-.-VVKTTVFLKDMND.FAAVNAIYGQYFDEA-.---TA---PARSCVEVARLP-..KDVLVEIDCVAVL |
| ALDR_LACLA/6-124 | TLDAP-.AA...........IGPYVQ-GKI.-VNGLLYASGQIPLNP....LNGEIV-GDSIETQTEQVMKNISAILKEAHSDFDL--.-.-VIKTTCFLKNIED.FSRFNAIYSKFFDKE-.---F----PARSAVGVAGLP-..KNVLIEIEVIAEV |
| O86529_STRCO/11-131 | FGDRL-.--...........--AYNRAVLVeQPRRWLVVAGHEARD-....DEGGIAAVDDVRGQLRLTFRRLAETLDKAGFALSD--.-.-LVQIRIFTVDIEAvTAHYDAVLDELAAAD-.------CRPASLLAEVRALSD..PRMLVEIEGLAAQ |
| O07205_MYCTU/10-121 | SGSEF-.ES...........AVGYSR-AVR.-IGPLVVVAGTTGS--....-------GDDIAAQTRDALRRIEIALGQAGATLAD--.-.-VVRTRIYVTDISR.WREVGEVHAQAFGKI-.-------RPVTSMVEVTALIA..PGLLVEIEADAYV |
| O85956_SPHAR/13-126 | SGNPI-.--...........-------PAAsRVGSLVATGGVYGLDP....ETGIV--AETAEDQVRLTFWQLGRILEKAGGSFDD--.-.-VAKMTFYVA----.SADLKPLINKYWLME-.-FTDEQSRPARHTLMYNSLP-..GDIVIQCDALAFV |