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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01042 phylogeny
for nucleotide alignment


 
(((((((((((Y944_HELPJ/7-125,YSD2_CAEEL/19-136),Y709_SYNY3/8-128),(ALDR_LACLA/6-124,YABJ_BACSU/6-123)),(((Y322_HAEDU/1-114,Y1627_HAEIN/2-116),(Y364_AQUAE/6-125,Y142_LEUMC/8-130)),(Q07261_YEAST/287-418,(MMF1_SCHPO/41-162,(HMF1_YEAST/10-127,MMF1_YEAST/26-143))))),(YJGH_ECOLI/11-128,TDCF_ECOLI/7-127)),Y4SK_RHISN/7-125),(DFRA_MYXXA/11-131,YVN1_AZOVI/8-126)),YCDK_ECOLI/10-126),Q44518_ANAVA/58-181),(((O85956_SPHAR/13-126,O86529_STRCO/11-131),(O07205_MYCTU/10-121,Q55925_SYNY3/86-202)),Q9ZBJ6_STRCO/11-130)),O69646_MYCTU/16-150,O96876_TRYCR/22-158);
(((((((((((Y944_HELPJ/7-125:0.34255,YSD2_CAEEL/19-136:0.36725):0.07283,Y709_SYNY3/8-128:0.36579):0.04664,(ALDR_LACLA/6-124:0.36325,YABJ_BACSU/6-123:0.24297):0.06540):0.05766,(((Y322_HAEDU/1-114:0.29747,Y1627_HAEIN/2-116:0.22359):0.45190,(Y364_AQUAE/6-125:0.37803,Y142_LEUMC/8-130:0.31298):0.03449):0.10151,(Q07261_YEAST/287-418:0.80561,(MMF1_SCHPO/41-162:0.33314,(HMF1_YEAST/10-127:0.21091,MMF1_YEAST/26-143:0.14021):0.19284):0.06213):0.04076):0.06716):0.17276,(YJGH_ECOLI/11-128:0.64468,TDCF_ECOLI/7-127:0.27445):0.05275):0.11050,Y4SK_RHISN/7-125:0.30174):0.12530,(DFRA_MYXXA/11-131:0.25882,YVN1_AZOVI/8-126:0.16924):0.04764):0.14763,YCDK_ECOLI/10-126:0.58006):0.02412,Q44518_ANAVA/58-181:1.09899):0.04829,(((O85956_SPHAR/13-126:0.58557,O86529_STRCO/11-131:0.40657):0.07680,(O07205_MYCTU/10-121:0.37528,Q55925_SYNY3/86-202:0.67541):0.20489):0.07774,Q9ZBJ6_STRCO/11-130:0.23699):0.06147):0.50020,O69646_MYCTU/16-150:0.26976,O96876_TRYCR/22-158:0.44740);