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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01028 alignment
(31 sequences with 294 aa)


TOP1_YEAST/363-599 aNSSLKGQSDYKKFEKAR----------QLKSYIDAIRRD.YTRNL----KSK.......VMLERQKAVAIYLIDVFALRAGGEKSEDE.ADTVGCCSLRYEHVTLKP--.....--.--PNTVIFDFLGKDSIRFYQEVEVDK-QVFKNLTIFK-RPPKQPGHQLFDRLD----.PSILNKYLQNYMPGLTAKVFRTYNASKTMQDQL----.DLIPn..KGSVAEKI-------LKYNAANRTVAILCNHQRTVTKGH-AQTVEKANNRIQELEWQKIRCKRAILQLDKDLL
TOP1_CANAL/373-609 nNSSVKGQSDFKKFETAR----------KLRDHVDSIRKD.YTKML----KSE.......KMQDRQMATAMYLIDVFALRAGGEKGEDE.ADTVGCCSLRYEHVTLKP--.....--.--PNKVIFDLLGKDSIRFYQEVEVDK-QVFKNLRIFK-KSPKQPGDDLFDRIN----.PSLVNRQLQNYMKGLTAKVFRTYNASKTMQDQI----.DIIEn..EGTVAEKV-------AKFNAANRTVAILCNHQRTVSKTH-GDSVQRINDKLKKFMWQKIRLKKMILQLEPKLK
O60013_PNECA/358-594 aGSSLKGQSDLKKYEKAR----------ELKLYIDNIRKQ.YRKEL----EDK.......LMEVRQRATAMYLIDLFALRAGNEKGEDE.ADTVGCCSLRYEHISLSP--.....--.--PNTVVFDFLGKDSIRYYNEVQVDP-QVFKNLKIFK-RSPKTEGDMLFDRLN----.TSKLNNHLTSLMPGLSAKVFRTHNASYTMSEQL----.KNTP.k.DASISDKV-------LAYNRANRMVAILCNHQRTISKTH-SAQMERIEDKILALKYQKIRLRKAILTLDPKLE
TOP1_SCHPO/410-646 aGSSLKGQSDLKKYEKSR----------KLKDYIDDIRKG.YRKDL----KSE.......LTVERQRGTAMYLIDVFALRAGNEKGEDE.ADTVGCCSLRYEHVTLKP--.....--.--PRTVVFDFLGKDSIRYYNEVEVDP-QVFKNLKIFK-RPPKKEGDLIFDRLS----.TNSLNKYLTSLMDGLSAKVFRTYNASYTMAEEL----.KKMPk..NLTLADKI-------LFYNRANRTVAILCNHQRSVTKNH-DVQMERFAERIKALQYQRMRLRKMMLNLEPKLA
O13463_EMENI/464-700 aNSDVKGQSDYKKFEKAR----------ELKKHIARIRKD.YQKNL----KHE.......LMVERQKATAVYLIDQFALRAGNEKGEDE.AETVGCCSLKYENVTLKP--.....--.--PNKVIFDFLGKDSIRFYDEVEVDP-QVFKNLKIFK-KPPKKEGDEIFDRLT----.TSALNKHLSQYMPGLTAKVFRTYNASHTMSELL----.KSMHa..TGNNAEKV-------KAYNDANRKVAILCNHKRTVGAVT-RDQMEKMSERIKGQRYQKWRLKQMMLDLDPSLK
O59891_CRYNE/439-675 aGSAWKGQSDRAKFEKAR----------ELIKHVDKIRKD.YTADL----KSK.......IMADRQRATALYFIDRLALRAGNEKGEDE.ADTVGCCSLRYEHVTLSP--.....--.--PNTIIFDFLGKDSMRFHQEVEVDP-QVFKNIKLFKADP-KKKGDDIFDRLT----.TTLLNKHLNGMMPGLTAKVFRTYNASWTFQEQL----.KN-Tpt.NGTVAEKI-------AAYNTANRDVAILCNHQKSVSKGF-EGSFAKAEDKIRALKYQRLKLRLQLFSLNPKIK
TOP1_XENLA/487-729 pSSRIKGEKDWQKYETAR----------RLKMCVEKIRNT.YKEDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVGCCSLRVEHINLFQ--.....ELdGQEFVVEFDFPGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPDDDLFDRLN----.TSILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.DELTns.DDNVPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQGKIDAKKDQLADARREFKSAKADAK
TOP1_MOUSE/433-675 pSSRIKGEKDWQKYETAR----------RLKKCVDKIRNQ.YREDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVGCCSLRVEHINLHP--.....ELdGQEYVVEFDFPGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPEDDLFDRLN----.TGILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.KELTap.DENVPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQSKIDAKKDQLADARRDLKSAKADAK
TOP1_RAT/433-675 pSSRIKGEKDWQKYETAR----------RLKKCVDKIRNQ.YREDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVGCCSLRVEHINLHP--.....ELdGQEYVVEFDFPGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPEDDLFDRLN----.TGILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.KELTap.DENVPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQSKIDAKKDQLADARKDLKSAKADAK
TOP1_CRIGR/433-675 pSSRIKGEKDWQKYETAR----------RLKKCVDKIRNQ.YREDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVSCCSLRVEHINLHP--.....ELdGQEYVVEFDFPGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPEDDLFDRLN----.TGILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.KELTap.DENVPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQSKIDAKKDQLADARRDLKSAKADAK
TOP1_HUMAN/431-673 pSSRIKGEKDWQKYETAR----------RLKKCVDKIRNQ.YREDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVGCCSLRVEHINLHP--.....ELdGQEYVVEFDFLGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPEDDLFDRLN----.TGILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.KELTap.DENIPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQTKIDAKKEQLADARRDLKSAKADAK
P79994_CHICK/432-674 pSSRIKGEKDWQKYETAR----------RLKKCVDKIRNQ.YREDW----KSK.......EMKVRQRAVALYFIDKLALRAGNEKEEGEtADTVGCCSLRVEHIKLHP--.....ELdGQEYVVEFDFLGKDSIRYYNKVPVEK-RVFKNLQLFM-EN-KQPEDDLFDRLN----.TSILNKHLQDLMEGLTAKVFRTYNASITLQQQL----.KELTnp.DDNIPAKI-------LSYNRANRAVAILCNHQRAPPKTF-EKSMMNLQSKIDAKKEQLADARRELKSAKADAK
TOP1_DROME/654-891 pSSKLKGEKDHIKYETAR----------RLDKVIDKIRAT.YRDEW----KSK.......EMRVRQRAVALYFIDKLALRAGNEKDEDQ.ADTVGCCSLRVEHVQLHK--.....ELnGKENVVVFDFPGKDSIRYYNEVEVEK-RVFKNLELFM-EH-KKEGDDLFDRLN----.TQVLNEHLKELMEGLTAKVFRTYNASKTLQSQL----.DLLTdp.SATVPEKL-------LAYNRANRAVAILCNHQRSVPKSH-EKSMENLKEKIKAKREAIEKCESEYHSRD----
O17965_CAEEL/401-650 pSSKIKGEKDFEKYETAR----------RLKKKIGGIRER.YTDDF----KSK.......EMRVRQRATALYFIDKLALRAGNEKDVDEaADTVGCCSLRVEHIKLFDSAklnedDKkEKEFVVEFDFLGKDSIRYFNRVSVEK-RVYKNLKIFM-EG-KAPSDDLFDRLD----.TATLNDHLRSLMDGLTVKVFRTYNASITLQEQL----.IKLTnp.KDNVAAKI-------LSYNRANRQVAILCNHQRAVSKGF-DESMQKLEQKIKDKKKEVKEAEAALKSARGAEK
O17966_CAEEL/473-722 pSSKIKGEKDFEKYETAR----------RLKKKIGGIRER.YTDDF----KSK.......EMRVRQRATALYFIDKLALRAGNEKDVDEaADTVGCCSLRVEHIKLFDSAklnedDKkEKEFVVEFDFLGKDSIRYFNRVSVEK-RVYKNLKIFM-EG-KAPSDDLFDRLD----.TATLNDHLRSLMDGLTVKVFRTYNASITLQEQL----.IKLTnp.KDNVAAKI-------LSYNRANRQVAILCNHQRAVSKGF-DESMQKLEQKIKDKKKEVKEAEAALKSARGAEK
Q27529_CAEEL/473-722 pSSKIKGEKDFEKYETAR----------RLKKKIGGIRER.YTDDF----KSK.......EMRVRQRATALYFIDKLALRAGNEKDVDEaADTVGCCSLRVEHIKLFDSAklnedDKkEKEFVVEFDFLGKDSIRYFNRVSVEK-RVYKNLKIFM-EG-KAPSDDLFDRLD----.TATLNDHLRSLMDGLTVKVFRTYNASITLQEQL----.IKLTnp.KDNVAAKI-------LSYNRANRQVAILCNHQRAVSKGF-DESMQKLEQKIKDKKKEVKEAEAALKSARGAEK
Q9Y180_LEIDO/257-494 pSSSVKGQSDMVKFEKAR----------KLKDKVDDIRAS.YMEDF----KSN.......DLHVAQRAVAMYFIDRLALRVGNEKGEDE.ADTVGCCSLRVEHIQLMP--.....--.--DNIVRFDFLGKDSIRYQNDVAVLP-EVYALLQRFT-RR-KSPGMDIFDQLN----.PTQLNDHLKSFMDGLSAKVFRTYNASITLDRWF----.KEKPvdpKWSTADKL-------AYFNKANTEVAILCNHQKSVSKNF-KLQMMQLTTKSEYTRKTIELLEKAEVTAKKKSV
TOP1_ARATH/583-818 aGSSLKGLSDKEKYEKAR----------NLTDHIDNIRTT.YTKNF----TAK.......DVKMRQIAVATYLIDKLALRAGNEKDDDE.ADTVGCCTLKVGNVECIP--.....--.--PNKIKFDFLGKDSIQYVNTVEVEP-LVYKAIGQFQ-AG-KSKTDDLFDELD----.TSKLNAHLKELVPGLTAKVFRTYNASITLDEML----.SQETk..DGDVTQKI-------VVYQKANKEVAIICNHQRTVSKTH-GAQIEKLTARIEELKEVLKELKTNLDRAKKGKP
Q9ZSC8_TOBAC/547-782 aSSSLKGQSDKEKYEKAR----------RLKDYIEGIRSA.YTKDF----TSK.......DPVKRQIAVATYLIDKLALRAGNEKDDDE.ADTVGCCTLKVENVEPVP--.....--.--PNILKFDFLGKDSIRYQNEVAVYK-PVFKAIQLFR-SG-KKGGDDLFDKLD----.TSKLNAHLKELMPGLTAKVFRTYNASVTLEQQL----.TKLTq..GGELAEKV-------AVYNLANKEVAIICNHQRSVSKSH-SVQISKLNEKIDELKALLEEFKVDLARAKKGKP
TOP1_DAUCA/432-673 aSSSLKGKVTREKYEKSR----------KLKDYIEGIRAAaYTKDF----ASK.......DSKKRQIAVATYLIDKLALRAGNEKDDDE.ADTVGCCTLKVENVETKR--.....--.--PNILKFDFLGKDSIRYQNEVEVEP-RVFSAIEQFR-SG-KEGGDDLFDQLD----.TSKLNAHLKELMPGLTAKVFRTYNASITLDEMVRCKLlSRETk..GGDVAEKV-------VVYQHANKEVAIICNHQRTVSKSH-SAQMVRLNEKIEELKGLLKELQEDLTRVNKGKP
O24307_PEA/557-792 aSSSLKGQSDKEKYEKAR----------MLKDYIGNIRAY.YTKDF----TSK.......DITKQQIAVATYLIDKLALRAGNEKDDDE.ADTVGCCTLKVENVTRET--.....--.--PNKLKFNFLGKDSIKYENTVEVEL-PVYNAILKFQ-KD-KGPGDDLFDKLD----.TNKLNAHLKELMPGLTAKVFRTFNASITLDDKL----.NKDTk..DGDAAEKI-------VVYQHANKQVAIICNHQRSVSKSH-SAQMTKLNEKIDELQDVLKELKVDLDRARKGKS
TOP1_VACCV/62-305 sDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINCF.INKNI---KKSS.......TDSNYQLAVFMLMETMFFIRFGKMKYLKE.NETVGLLTLKNKHIEISP--.....--.---DEIVIKFVGKDKVSHEFVVHKSN-RLYKPLLKLT-DD-SSPEEFLFNKLS----.ERKVYECIKQF--GIRIKDLRTYGVNYTFLYNFWTNV.----...-----KSISPLPSPKKLIALTIKQTAEVVGHTPSISKRAYMATTILE-MVKDKNFLDVVSKT-TFDEFLSIVV
Q89220_VARV/62-305 sDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINCF.INKNI---KKSS.......TDSNYQLAVFMLMETMFFIRFGKMKYLKE.NETVGLLTLKNKHIEISP--.....--.---DKIVIKFVGKDKVSHEFVVHKSN-RLYKPLLKLT-DD-FSPEEFLFNKLS----.ERKVYECIKQF--GIRIKDLRTYGVNYTFLYNFWTNV.----...-----KSISPLPSPKKLIALTIKQTAEVVGHTPSISKRAYMATTILE-MVKDKNFLDVVSKT-TFDEFLSIVV
Q85387_VARV/62-305 sDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINCF.INKNI---KKSS.......TDSNYQLAVFMLMETMFFIRFGKMKYLKE.NETVGLLTLKNKHIEISP--.....--.---DKIVIKFVGKDKVSHEFVVHKSN-RLYKPLLKLT-DD-SSPEEFLFNKLS----.ERKVYECIKQF--GIRIKDLRTYGVNYTFLYNFWTNV.----...-----KSISPLPSPKKLIALTIKQTAEVVGHTPSISKRAYMATTILE-MVKDKNFLDVVSKT-TFDEFLSIVV
TOP1_VARV/62-305 sDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINCF.INKNI---KKSS.......TDSNYQLAVFMLMETMFFIRFGKMKYLKE.NETVGLLTLKNKHIEISP--.....--.---DKIVIKFVGKDKVSHEFVVHKSN-RLYKPLLKLT-DD-SSPEEFLFNKLS----.ERKVYECIKQF--GIRIKDLRTYGVNYTFLYNFWTNV.----...-----KSISPLPSPKKLIALTIKQTAEVVGHTPSISKRAYMATTILE-MVKDKNFLDVVSKT-TFDEFLSIVV
TOP1_SFVKA/62-305 lDSKGRRQYFYGKMHVQRRNSARDTIFIKVHRVIDKIHKF.IDDTI----EHK.......NDVLFQLGVFMLMETSFFIRMGKVKYLKE.NDTVGLLTLKNKNIVREN--.....--.---RKILIHFVGKDKIIHNFTVHSSN-RLYKPLLRLI-GR-KEPDSFLFHKLS----.EKKVYKAVQQF--GIRLKDLRTYGVNYTFLYNFWTNV.----...-----KSLNPIPPIKKMISTSIKQTADIVGHTPSISKRAYIANTVLEYLTHDSELINTIRDI-SFDEFIRLIT
Q9Q8M6_9POXV/62-305 lDSKGRRQYFYGKMHVQRRNSARDTIFIKVHRVIDKIHTF.IDDAI----KQK.......NDVLFQLGVFMLMETSFFIRMGKVKYLKE.NDTVGLLTLKHKNIVREH--.....--.---RKILIHFVGKDKVVHNFTVHSSN-KLYKPLLRLI-DR-KEPDSFLFHKLS----.EKKVYKAVQQF--GIRLKDLRTYGVNYTFLYNFWTNV.----...-----KSLNPIPPIKKMISTSIKQTADIVGHTPSISKRAYIANTVLEYLTHDSELINTIKDI-SFDEFIQLIT
Q84147_9POXV/62-307 rDAKGRKQYFYGRGHVERRTAVRNAVFVRVHRVMNKINAF.IDDHLA----SG.......SEAEAQMAAFLLMETSFFIRVGKTRYERE.SGTVGMLTLRNKHLAEAE--.....--.-GGEEIRVAFVGKDRVAHEFAVREGQ-RLFAALRRLW-DP-GAPDRLLFDRLS----.ERRVYTFMRRF--GIRVKDLRTYGVNYTFLYNFWSNV.----...-----RSLEPRPSVKSLICTSVRQTAETVGHTPSISRSAYMATAVLE-LVRDGAFLDRVAATDTLDDFVDIVV
Q98254_MCV1/63-308 lDSKQRAQYFYGKLHVQRRHERRDAIFVRVFGIMDGLRRF.IDRHLDS-PEAA.......RDSKTQLAIFLLMETSFYIRTGKMRYFRE.NETVGMLTLKNRHLHEED--.....--.---GLLAIRFVGKDQVTHEFRVHAED-RLYVPLMRLR-DA-DAPEAFLFSRLS----.ERVVYRFLRTF--GVRVKDLRTYGVNVTFLSSLWTNV.----...-----KELPALPSARKLVALSIRQTAEAIGHSPHIARQAYMALTVLE-LARDASVFEHIRTLS-RDEFLAFIV
Q9YVW2_MSEPV/65-321 .DSTNKKQYIYGINFVTNRKKNKIKTFLKVNQKIPDIERY.IKKELDIFNKSDn....pkISINTLFAVILLMEMNFFIRTGKKKYLND.NETIGLLTLQKSNFTFNNDK.....--.----YIDILFKGKKKQLQQFTVDKENHKLLYKILKLLIN---NTEDFIFKTTDNILFsESKMYQMMKMF--SISLKDIRTFGVNRILINELWKAM.----...-QLIDISYIKKNDIRRMITDVINKTANIIGHTPSISKKSYIVDELRSIITPD-LF---IYKDTSFKDFYNIII
P87507_AMEPV/65-325 .DSKNKKQYIYGINYVKKRRNDRIKIFLKVENKIPKIEKY.INKELNIFKKNGsnsshiyITDKMIFAIILLVEMCFFIRTGKKKYLED.NETIGLLTLQKNNFTIENDV.....--.-----IYINFKGKLSQNQNFSILKDEHLLIYNMIKILYN---KTNDFIFKNSDDIIFnESKLYSMIKQF--NIKLKDIRTFGVNRVLIQELWKNV.----...-RDLDIMDIRHKDIKKIISEVVKRTANIIGHTPTISKNSYIVDEIRSIIDKDTIN---KAKEMTFDEYYKYIV