EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01023 alignment
(21 sequences with 132 bp)


TRHY_SHEEP/4-47 CTTCTGAGAAGCATCTTTAATATCACTAAAATTTTCAATCAATATGCCTCACATGATTGTGATGGGACAACACTAAGCAAGAAAGACCTGAAGAATCTCCTTGAGAGGGAATTTGGAGAAATCCTTCGGAAA
TRHY_RABIT/4-47 CTTTTGAAAAGCATCATTGATATTATTGAAATTTTCAACCAATATGCCTCACATGACTGTGATGGGGCAGTACTAAAGAAGAAAGACCTAAAGATCCTTCTTGACAGGGAATTTGGAGCTGTCCTTCAGAGA
REPT_MOUSE/4-47 CTTCTTAATAGCATTCTCAACGTAAGCAAGGTTTTCCAGGACTATGCTGAATATCATGGGGTAGGCGCTTCACTGAGCAAGAAGGAGTTGAAGCAGCTGCTGCTCACTGAGTTTGGAGACATCCTTCGGAGA
Q01720_HUMAN/4-47 CTCCTGGAAAACATCTTTGCCATAATTAATCTTTTCAAGCAATATTCAAAAAAAGATAAAAACACTGACACATTGAGTAAAAAAGAGCTGAAGGAACTTCTGGAAAAGGAATTTCGGCAAATCCTGAAGAAT
S10AC_HUMAN/3-46 CTTGAAGAGCATCTGGAGGGAATTGTCAATATCTTCCACCAATACTCAGTTCGGAAGGGGCATTTTGACACCCTCTCTAAGGGTGAGCTGAAGCAGCTGCTTACAAAGGAGCTTGCAAACACCATCAAGAAT
S10AC_BOVIN/3-46 CTGGAAGATCACCTGGAGGGAATCATCAACATCTTCCACCAGTACTCCGTTCGGGTGGGGCATTTCGACACCCTCAACAAGCGTGAGCTGAAGCAGCTGATCACAAAGGAACTTCCCAAAACCCTCCAGAAC
S10A9_RAT/8-51 CTGGAGCGCAGCATAAGCACCATCATCAATGTTTTCCATCAGTACTCTAGGAAGTATGGACATCCTGACACCCTGAACAAGGCGGAATTCAAAGAAATGGTGAATAAGGACTTGCCAAATTTTCTGAAGAGG
S10A9_HUMAN/8-51 CTGGAACGCAACATAGAGACCATCATCAACACCTTCCACCAATACTCTGTGAAGCTGGGGCACCCAGACACCCTGAACCAGGGGGAATTCAAAGAGCTGGTGCGAAAAGATCTGCAAAATTTTCTCAAGAAG
S10A9_MOUSE/8-51 ATGGAGCGCAGCATAACCACCATCATCGACACCTTCCATCAATACTCTAGGAAGGAAGGACACCCTGACACCCTGAGCAAGAAGGAATTCAGACAAATGGTGGAAGCACAGTTGGCAACCTTTATGAAGAAA
S10I_ICTPU/4-47 CTGCAAAAGGGCATGGCACTGCTCATCTCTACCTTTCATAAATATTCTGGCAAGGAGGGTGACAAATGTACTCTTACCAAGGGAGAGCTAAAAGATCTGCTCACCAAGGAGCTGGGAGGTGCATTCGGGAAC
S10A6_CHICK/5-46 CTGGACCAAGCCATTGGGCTCCTGGTGGCCACTTTCCACAAGTATTCGGGCAAGGAGGGCGACAAGAACAGCCTGAGCAAGGGCGAGCTGAAGGAGCTGATCCAGAAGGAGTTGACCATCGGGCCG------
S10A4_BOVIN/4-47 CTGGAGAAGGCCCTCGATGTGATGGTGTCCACCTTCCACAAGTACTCGGGCAAGGAGGGTGACAAGTTCAAGCTCAACAAGTCTGAGCTAAAGGAGCTGCTGACCCGGGAGCTGCCCAGCTTCTTGGGGAAA
S10A3_HUMAN/5-48 CTGGAGCAGGCGGTAGCTGCCATCGTGTGCACCTTCCAGGAATACGCAGGGCGCTGTGGGGACAAATACAAGCTCTGCCAGGCGGAGCTCAAGGAGCTGCTGCAGAAGGAGCTGGCCACCTGGACCCCGACT
S100P_HUMAN/4-47 CTAGAGACAGCCATGGGCATGATCATAGACGTCTTTTCCCGATATTCGGGCAGCGAGGGCAGCACGCAGACCCTGACCAAGGGGGAGCTCAAGGTGCTGATGGAGAAGGAGCTACCAGGCTTCCTGCAGAGT
S10AD_BOVIN/9-51 CTGGAGGCGGCCATTGAGACAGTGGTCACCACCTTCTTCACCTTTGCAGGGCGGGAAGGCAGAAAAGGCAGCCTCAGCGTCAATGAGTTTAAGGAACTGGTCACTCAGCAGTTGCCTCACCTGCTCAAG---
S10A7_BOVIN/6-46 CTTGAGCAGGCCATTACAGACTTGATCAACCTGTTTCACAAATACTCG---------GGATCCGATGACACCATCGAGAAGGAGGACCTGCTGCGGCTGATGAAGGACAACTTCCCCAACTTCCTCGGTGCC
S10AB_HUMAN/10-53 ACTGAGCGGTGCATCGAGTCCCTGATTGCTGTCTTCCAGAAGTATGCTGGAAAGGATGGTTATAACTACACTCTCTCCAAGACAGAGTTCCTAAGCTTCATGAATACAGAACTAGCTGCCTTCACAAAGAAC
S10AB_CHICK/9-52 ACCGAGCGCTGCATTGAGTCGCTGCTGGCCGTCTTCCAGAGGTACGCAGGGCGTGAAGGAGACAACCTCAAGCTCTCCAAGAAAGAATTCCGGACTTTCATGAACACCGAGCTGGCTTCCTTCACAAAGAAT
S10A8_MOUSE/4-47 CTGGAGAAGGCCTTGAGCAACCTCATTGATGTCTACCACAATTATTCCAATATACAAGGAAATCACCATGCCCTCTACAAGAATGACTTCAAGAAAATGGTCACTACTGAGTGTCCTCAGTTTGTGCAGAAT
S10A8_HUMAN/5-48 CTGGAGAAAGCCTTGAACTCTATCATCGACGTCTACCACAAGTACTCCCTGATAAAGGGGAATTTCCATGCCGTCTACAGGGATGACCTGAAGAAATTGCTAGAGACCGAGTGTCCTCAGTATATCAGGAAA
S10AA_CHICK/1-44 CCGTCCCAGATGGAGCACGCCATGGAGACGCTGATGTTCACCTTCCACAAATACGCGGGTGACAAGAACTACCTGAGCAAGGAGGACCTGCGTGCGCTGATGGAGAAGGAGTTCCCCGGATTCCTGGAGAAC