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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF01007 - IRK) |
| Inward rectifier potassium channel |
| (Pfam reference: accession no. PF01007) |
| (Interpro reference: accession no. IPR001838) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
14 sequences @ 378 aa (ave. pairwise identity: 0.48) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 5.54) |
| nucleotides (available for above) |
12 sequences @ 1134 bp (ave. pairwise identity: 0.58) |
New Hampshire format (total tree length: 3.55) |
|
amino acids, restricted set (corresp. to available nt seqs) |
12 sequences @ 378 aa (ave. pairwise identity: 0.50) |
New Hampshire format (total tree length: 4.42) |