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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00998 - RdRP_3)
Viral RNA dependent RNA polymerase
(Pfam reference: accession no. PF00998)
(Interpro reference: accession no. IPR002166)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
33 sequences @ 545 aa
(ave. pairwise identity: 0.31)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 16.64)
nucleotides
(available for above)
25 sequences @ 1635 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 11.57)
amino acids, restricted set
(corresp. to available nt seqs)
25 sequences @ 545 aa
(ave. pairwise identity: 0.31)
New Hampshire format
(total tree length: 14.38)