EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00992 alignment
(19 sequences with 441 bp)


TRT3_CHICK/68-210 AAGAGGCAGAACAAAGACCTGATTGAACTGCAGGCCTTGATTGACAGCCACTTTGAGGCCAGGCGAAAGGAAGAAGAAGAGCTGGTTGCCCTTAAGGAGAGG---ATTGAGAAACGCAGAGCTGAAAGAGCAGAGCAACAGAGAATCCGGGCTGAGAAGGAGAAGGAGCGTCAAGCACGGCTTGCGGAGGAAAAGGCACGGAGAGAGGAAGAAGATGCCAAGAGAAAAGCCGAGGATGATCTCAAGAAGAAGAAGGCTCTGTCCTCCATGGGTGCCTCATACAGCAGCTATCTGGCAAAGGCTGATCAG---......AAGAGAGGGAAGAAGCAAACAGCTAGAGAGACAAAGAAGAAGGTCCTGGCAGAGAGGCGCAAGCCCTTGAACATTGACCATCTTAATGAAGACAAGCTGAGGGACAAGGCTAAGGAACTGTGG
TRT3_MOUSE/75-217 AAGCGTCAAAACAAGGACCTCATGGAGCTCCAAGCCCTCATTGACAGCCACTTTGAAGCTAGAAAGAAAGAAGAAGAGGAGCTAATCGCACTTAAAGAAAGA---ATTGAGAAGCGCCGTGCAGAGAGGGCTGAGCAGCAAAGAATTCGCGCTGAGAAGGAGCGGGAACCGCAGAACAGATTGGCGGAGGAGAAGGCCAGAAGAGAGGAGGAGGATGCCAAGAGGAGAGCTGAAGATGACATGAAGAAGAAAAAGGCTCTGTCCTCCATGGGTGCCAACTACAGCAGCTACCTGGCCAAGGCTGACCAGAAG......---AGAGGCAAGAAACAGACAGCCCGGGAAATGAAAAAGAAGATTCTTGCCGAAAGGCGCAAGCCTCTGAACATTGACCATCTTAGCGATGACAAGCTGAGGGACAAGGCCAAGGAACTCTGG
TRT2_MOUSE/105-249 AAGCGCGTGGAGAAGGACCTGAATGAGCTACAGACTCTGATCGAGGCTCACTTCGAGAACAGGAAGAAGGAGGAAGAGGAGCTGATTTCCCTCAAAGACAGG---ATCGAAAAGCGTCGGGCAGAGCGGGCCGAGCAGCAGCGTATTCGCAATGAGCGGGAGAAGGAAAGGCAGAACCGCCTGGCTGAAGAGAGGGCCCGGCGTGAGGAGGAGGAGAACAGGAGGAAGGCTGAGGATGAGGCCCGGAAGAAGAAGGCTCTGTCCAACATG---ATGCACTTTGGAGGGTACATCCAGAAGCAAGCTCAGACAgagcggAAGAGTGGGAAGAGACAGACAGAGAGAGAGAAGAAGAAGAAGATCCTGGCAGAGAGGAGGAAGGCGCTGGCCATCGACCACCTGAATGAAGACCAACTGAGAGAGAAGGCCAAGGAGCTGTGG
Q98916_CHICK/73-214 AAGCGCATGGAGAAGGACCTGCTGGAGCTGCAGACCCTCATTGACGCCCACTTCGAGCAGCGGCGCCGCGAGGAGAACGAGCTGGTGGCACTGATGGAGCGC---ATTGAACGGCGCCGGGCGGAGCGCAACGAGCAGCTGCGGAGCCGCACGGAGAAGGAGCGCGAGCGGCAAGCAAGGCTGGCAGAGGAGAAGCTCCGCAAGGAGGAGGAGGAGGCCAAGAAGCGAGCCGAGGATGACGCCAAGAAGAAGAAAGTCCTGTCCAACATG---CCCCACTTCGGGGGGTACCTGGCCAAGGCGGAGCAG---......CGGCGTGGGAAGCGGCAGACGGGGCGGGAGATGAAGCTGCGCATCCTGGCTGAGCGCAAGAAGCCCCTCCACATTGAGCACATGCGGGAGGATGAGCTGCGGGCCAAGGCCAAGGAGCTGCAC
Q25149_HALRO/34-177 AAAAGAATGGACAAGGTTCTTCTTGAATTGCAAAGTTTAATCAGTAGTCATTTTGAAACTCGTAAAAGGGCCGGGGGGGAAATTGACCAGTTGCGCATTCGT---ATTGAGGAACGAAAGGCATGTCGTGAAGAGCAAATGCGCGTAAGACAAGAAAAGGAAAAAGAGCGAATGGCACGGGAAAGGGAAGACCGCAAAAGAAAGGAAGAAGAGGAGGGGCAAAAGAGATTCGAAGAGGAAGCCAAGAGGAAAGCAGCCATTGCAAATATGTCACTGCATTATGGAGGTTATCTTGCTCGGCCGATCAAGATA......AGCCCAAACAAGAGACAGACTGATAGAGAAAAGAAGAAGAAGATTTTGTCCGACCGAAGAAAACCCCTGAATGTTGATCATCTAAGCGCTGAAAAGCTTCAAGAAAAGGCAAGCGAGCTGTGG
Q25148_HALRO/44-187 AAACGTCATCAGAAAGATCTTGAGGAATTGCAAGCTCTGATCACGGCGCATTTCGAACAACGTAAACAAGAAGAAGAGCAGCTAGAGGAACTTCGACTCAGA---CTTGAAAAGCGTAAGGAAGAACGTGCTGAGAGACTCCGAATACGCGAAGAGAAGACAAAAGAAAGAGTTGCACGGGAACGGGAAGAGAGGAAACACAAAGAAGAGGAGGATGAGAAAAAGCGCAAAGAGGAAGAAGAGAAAAAGAAGGCAGCAATTGCAAACATGTCTCTGCATTATGGCGGCTACCTGGCTCGGGCTGAGAAAAAC......AAACCGAACAAGCGTCAAACTGAAAGAGAAAAGAAGAAGAAACTTCTTGCTGAAAGAAAAAAGAATATATCTGTTGATCACCTAAGCCCCGACAAGCTGAGAGAAAAAGCTCAGGAATTGTGG
TRI_DROME/104-233 AAGAAGAAACTCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCTGAAGAAAGAACAGGAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAGAACGTTGCGGCAGTCCCAGGAATCTCAGCGATGCCAGCGAA---GGCGAATTGCAAGAGATTTGCGAAGAGTATTACGAGCGTATGTAT------ATTTGTGAAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGATCAACGATCTCAATGCCCAAGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCCCTGAAG......------AAGGTCTCCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAAGGCC---------------------------GCTGAGTTCAAC---TTCCGCAACCAGCTCAAGGTGGTGAAG
Q20334_CAEEL/58-191 AAGAAGAAGCTCCGCAAGCTTCTTATGAACAAGGCTGCTGAGGATCTTAAGACACAGCAATTGCGGAAGGAACAAGAAAGAGTCAAGGTCCTTGCTGAAAGAACCGTTGCTCTTCCAAATGTTGACAGCATTGATGATCACGCTAAGCTCGAGGCTATCTACAATGATTTGTTCTCCCGCCTCTGC------AACTTGGAGGAAGAGAAATATGATATCAACCACATCACCACAGAGACTGAAACTACAATTAATCAACTCAACATTGAGGTTAACGATCTTCGTGGAAAATTCGTAAAACCATCATTGAAG......------AAGGTGTCCAAGTATGACAACAAGTTCAAGAAGATGGCTGAAGCCAAGAAGGAAGAT------------------GGAAGCAAGAAC---TTGAGAAATAATCTCAAGACAGTAAAG
TNNI2_HUMAN/14-144 AGGCAGCACCTGAAGAGCGTGATGCTGCAGATAGCGGCCACGGAGCTGGAGAAGGAGGAGAGCCGCCGTGAGGCAGAGAAGCAGAACTACCTGGCGGAGCAC---TGCCCGCCGCTGCATATCCCGGGCTCC------ATGTCTGAAGTGCAGGAGCTCTGCAAACAGCTGCACGCCAAGATCGAT------GCGGCTGAAGAGGAGAAGTACGACATGGAGGTGAGGGTGCAGAAGACCAGCAAGGAGCTGGAGGACATGAACCAGAAGCTATTTGATCTGCGGGGCAAGTTCAAGCGGCCCCCACTGCGG......------AGGGTGCGCATGTCGGCCGATGCCATGCTCAAGGCCCTGCTGGGCTCGAAGCACAAG------------------GTGTGCATGGAC---CTGAGGGCCAACCTGAAGCAGGTCAAG
TNNI2_COTJA/14-144 CGGCAGCACCTGAAGAGTGCTATGCTCCAGCTTGCTGTCACTGAAATAGAAAAAGAAGCAGCTGCTAAAGAAGTGGAAAAGCAAAACTACCTAGCAGAGCAT---TGCCCTCCTCTGTCCCTCCCAGGATCC------ATGCAGGAACTTCAGGAACTGTGCAAAAAGCTTCACGCCAAGATAGAT------TCAGTGGATGAGGAAAGGTATGACACAGAGGTGAAGCTACAGAAGACTAACAAGGAGCTGGAGGACCTGAGCCAGAAGCTGTTTGACCTGAGGGGCAAGTTCAAGAGGCCACCCCTGCGC......------AGGGTGCGTATGTCCGCTGATGCCATGCTGCGTGCCCTGCTAGGCTCCAAGCACAAA------------------GTCAACATGGAC---CTCCGGGCCAACCTGAAGCAAGTCAAG
TNNI3_XENLA/70-201 AAGCTCCAACTGAACACTATGATGTTGCAAATTGCTAAGGCAGAAATGGAACGTGAGGAAGAGGAGAGAGCTCGCGAGAAGGAGAGATACCTTGCAGAACAC---TGTCAGCCTCTGCAACTGTCTGGCTTGTCC---CGATCTGAACTGCAGGACCTGTGTCAGGAGCTTCATGCAAGAATCGAT------GTAGTAGATGAAGAAAGATATGACATGGAAGCCAAAGTAAACAAAAACATAACTGAGCTCGAAGACTTGAACCAAAAGATCTTTGACCTCCGTGGCAAGTTCAAAAAGCCAAACCTCAGG......------AGGGTGCGTCTCTCTGCCGACGCCATGATGATGGCGCTGTTGGGCACCAAGCACAAA------------------GTCTCCATGGAT---CTACGGGCCAATCTCAAACAGGTCAAG
Q90350_COTCO/16-147 AAACTCCTGTTGAAGAGCTTGATGCTGGCAAAAGCCAAGGAGGAGTGGGATCAGGAGATCGTGGACAAACAGTCGGAGAAGGAGAGATACCTGTCTGAGCGC---ATCACCCCGCTGCACACCAGTGGGCTCTCC---TTGAGCCAGCTTCAGGATCTGTGCCGGGAGCTGCATGAGAAGGTGGAG------ATTGTGGATGAAGAGAGATATGACATCGAAGCAAAGTGCAACCATAACACTAGGGAGATTAAAGACCTGAAGCTCAAAGTGCTCGACCTGAGAGGGAAGTTCAAACGACCCCCGCTGCGG......------AGGGTCCGTGTCTCAGCTGATGCCATGCTGAGGGCTCTGCTGGGCTCCAAGCACAAG------------------GTGTCCATGGAC---CTGAGAGCCAACCTGAAGTCTGTCAAG
O01355_HALRO/13-145 AAACTGCAGCTCAAGTCTCTTTTGCTCAACAGAGCCCGGGAGGATTTGAAAAGAGAAGCTGAACAAAAAGCAGAAGAGAAAAAGAAGATTTTGAACAACAGA---ATCGAATCTCTCGGGGACTTATCTAGCATGTCGCAACAAGAACTGATGGAATTATGCCGAGAACTCCACGCAAAAACAGAC------AAAGTCGACGATGAAAGATTTGACATCGAATTAAAAGTGAAAAAGAACGACCAAGAGATCGAAGAACTAAATCAGAAAATCTTTGAACTCCGAGGTAAATTCAAACGCCCACCTCTGAGA......------CGTGTCCGTATGTCTGCTGACCAAATGTTGCGCGCCCTCCTGGGATCAAAACACAAA------------------GTTACAATGGAT---CTTAGATCCAACCTCAAGACAGTCAAA
O01354_HALRO/15-147 AAGCAAAATCTCAAATCTCTGATGCTTAACAAGGCCCGCGAAGATTTGAAACGCGAGGCGGAAGTTAAAGCTGAAGAGAAAAAGAAAATTCTCAACAGCAGA---ATCGAACCGCTCTCTAACCTTGGTGGCATGTCAGAGCAAGACCTGAAGGATCTTTGCAGAGAACTGCACGCGAAAATTGAA------AAAGTCGACGAACAAAGATACGACATCGAGGTGAAAGTCAACAAGAATGACCAAGAGATAGAGGATCTTAACCAGAGGATATTCGATCTTCGCGGCAAGTTCAAACGACCTCCACTGCGC......------AGAGTCCGCATGTCAGCCGACCAAATGCTCCGCGCCCTCCTCGGATCCAAGCACAAA------------------GTGTCTATGGAT---CTCCGATCAAGCCTAAAATCCGTCAAG
TNNI3_CHICK/1-129 AAGCTGCAGCTCAAGACGTTGCTGCTGCAGAGAGCAAAGCGGGAGTTGGAGCGCGAGGAGCAGGAGAGGGCAGGAGAGAAACAGCGGCACCTGGGGGGACTG---TGCCCCCCCCCGGAGCTGGAGGGCTTGGGG---GTGGCCCAGCTGCAGGAGCTGTGCCGGGAGCTGCACGCCCGCATA---------GCGGTGGATGAGGAGCGCTACGACATGGGGACGCGCGTCAGCAAGAACATGGCCGAGATGGAGGAGCTGCGGCGCCGCGTGGCCGGGGGTCGC------TTTGTTCGCCCCGCGCTGCGC......------CGCGTGCGGCTGTCGGCCGACGCCATGATGGCGGCGCTGCTGGGCTCCAAGCACCGC------------------GTGGGGACCGAC---CTGAGGGCCGGGCTGCGGCAGGTGCGG
Q90365_CLUHA/11-140 AAGCATCACCTGAAGAGCGTGATGCTTGCAATTGCTGCAACGCGGCTTGAACAGGAAGCGGCCGATGCGATAGCAGCCAAGGAGACGTACCTGAGTGACAAC---TGCCCATCCCTTGATTACCCCAGCAGT------ATTGAGGACCTTCAGAAACTGTGCAAAGAGCTACATTCGAAGATTGAC------ATAGTTGATGAGGACAGATACGACGCAGAGTCCAAAGTAACGAAGGGAGCAAAAGAGGTTGAAGACCTGTTGTTCAAGGTAACAGAATTGAAGGGT---ATGAAGAAGCCAGCTCTGAAG......------AAAGTGCGCTTGTCCGCTGATCAGATGCTTCAGGCTCTGCTGGGCTCCAAGCACAAG------------------GTCAGCATGGAC---CTGAGATCCAACCTGAAGCAGGTGAAG
O13094_SALSA/13-143 AAGCACACTCTGAAGAGTTGTATGCTGGCACTTGCTAAGGATTGGCTTGAAGCTGAAGCATTAGAGAAAGTTAAAGAGAGGGAGAGATACATGGCAGAGAAC---TGCCCTCCTCTGGAGATGTCCCACTCC------AAGGAAGATTTGATGGAGCTTTGCAAGAAGATGTACGACAAAATTAAT------GTGATTGATGAAGAGAGATACAACTTAGAATATAAAGTGATCATGGTTTGCAATGAGGTTTTAGACCTAAACATCAAAATAGTTGACCTGAGGGGAAAGTTCAAGAAGCCAGCTCTGAAG......------AAAGTGCGTATGTCTGCTGATGCTATGCTCCAGGCTCTGCTGGGCTCCAAGCACAAG------------------GTGACCATGGAT---TTGAGATCCAACCTGAAACAAGTGAAG
O13093_SALSA/11-139 AAGCATCATCTGAAGAGCTTGATGCTTCAGATTGCAGCCAATTTGATTGAAGAGGAGAAAAAGGAGATGAAGCAGGAGAAAGTGAATTTCATGGCTAAC------ATCCCCGCCCTGGATTTGTCTGGAGAT------CAAGCAATGCTGATGGAAATGCTCAAAAAGTTGTCCCAGACCATCGAC------AAGGTTGATGAGGAAAGATATGACGCAGAAGCAAAAGTGAAGAAGACAGAAAAAGAGATTGAGGACTTGAAGATGAAAGTGATTGAGGTTCAGGGC---ATCAAGAAGCCAGCTCTGAAG......------AAAGTGCGTATGTCTGCTGATGCTATGCTTGCAGCTCTGCTGGGCACCAAGCACAAG------------------GCTTCCATGGAC---TTTAGAGCCAACTTGAAAGAAGTGAAG
O15987_PATYE/99-241 AACAGACAGCAGGAAGAACTACGTCGCCAGCGCCAAGAAGAAGAAAGACAGAGGCGGGAAGAAGAGCAAAGGAGACAACAGGAAGAGGAAGAGCGGTTGAGACTTGAACGGGAAGAACAGGAGAGAGAAGAGGAAGCCAGAAGAATGGCGGAGGAACAAAAGAAGAAAAAAAAGAAGGGTCTGGGTGGTCTTTCCCCAGAGAAGAAGAAGATGTTGAAAAAACTCATCATGCAAAAGGCAGCAGAGGACTTGAAAAACGAGGCCAAAGCCAAGGCAGAGGCTAAGGAGAAATATATCAATGACCTCGTACCC......AAATTTAGCACTGATGGAAAGGATGTAGCTGCACTCCAAGCTCTTTGTAAAGATTTTCACAAGAAGCTTGCATCA------CTCGAAGAAGATGTTTATGACTGGGAGGCAAAGATTCGCAAA