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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00988 phylogeny
for amino acid alignment


 
((((((((((((CARA_CYACA/11-160,(CARA_HELPY/1-146,O24447_ARATH/54-201)),(CARA_PORPU/5-154,CARA_SYNY3/7-154)),(CARA_ECOLI/3-151,(CARA_PSEAE/3-151,CARA_NEIGO/3-151))),CARA_MYCTU/2-153),(CARA_LACPL/1-144,(CARA_BACCL/1-146,CARA_BACSU/1-146))),((CARA_METJA/1-144,CARA_METTH/3-150),CARA_ARCFU/1-148)),CARA_SULSO/6-157),PYR1_DROME/4-165),(Q18990_CAEEL/1-155,(PYR1_HUMAN/1-151,PYR1_SQUAC/1-151))),O15829_LEIME/5-155),((PYR1_SCHPO/57-207,PYR1_YEAST/20-171),(CPSM_HUMAN/44-193,P70087_ONCMY/41-190))),CARA_NEUCR/53-206,CARA_YEAST/6-156);
((((((((((((CARA_CYACA/11-160:0.52044,(CARA_HELPY/1-146:0.76352,O24447_ARATH/54-201:0.37594):0.16015):0.10595,(CARA_PORPU/5-154:0.41717,CARA_SYNY3/7-154:0.20194):0.07838):0.08040,(CARA_ECOLI/3-151:0.15782,(CARA_PSEAE/3-151:0.17411,CARA_NEIGO/3-151:0.20469):0.10317):0.25517):0.06113,CARA_MYCTU/2-153:0.48015):0.19427,(CARA_LACPL/1-144:0.37765,(CARA_BACCL/1-146:0.23397,CARA_BACSU/1-146:0.16942):0.20284):0.08523):0.10399,((CARA_METJA/1-144:0.31123,CARA_METTH/3-150:0.24017):0.16857,CARA_ARCFU/1-148:0.24328):0.13290):0.12281,CARA_SULSO/6-157:0.48401):0.17445,PYR1_DROME/4-165:0.78032):0.12048,(Q18990_CAEEL/1-155:0.49013,(PYR1_HUMAN/1-151:0.22593,PYR1_SQUAC/1-151:0.21763):0.16148):0.09950):0.06824,O15829_LEIME/5-155:0.49068):0.05036,((PYR1_SCHPO/57-207:0.23430,PYR1_YEAST/20-171:0.25300):0.20513,(CPSM_HUMAN/44-193:0.21926,P70087_ONCMY/41-190:0.14201):0.26376):0.06799):0.36969,CARA_NEUCR/53-206:0.68656,CARA_YEAST/6-156:0.08067);