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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00979 - Reovirus_cap)
Reovirus outer capsid protein, Sigma 3
(Pfam reference: accession no. PF00979)
(Interpro reference: accession no. IPR000153)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
2 sequences @ 383 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.98)
nucleotides
(available for above)
2 sequences @ 1149 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 1.32)
amino acids, restricted set
(corresp. to available nt seqs)
2 sequences @ 383 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 1.98)