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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00969 phylogeny
for amino acid alignment


 
(((((((((((((((((((P79466_BOVIN/8-82,O19298_9PRIM/6-79),((Q31244_MUSSA/8-81,HB2K_HUMAN/42-116),(O19253_CANFA/6-79,(O19231_DELLE/5-79,O19236_DELLE/5-79)))),(((Q30854_OTOGA/8-82,2B32_HUMAN/42-116),O19291_MACMU/6-80),(2B17_HUMAN/42-116,Q30661_MACMU/6-80))),((Q30217_HUMAN/8-82,O19288_MACMU/6-80),O19287_MACMU/6-80)),(((Q30461_HORSE/4-78,(((O19364_FELCA/5-79,(O19382_FELCA/5-79,O19396_FELCA/5-79)),O19378_FELCA/5-79),O19229_DAMDA/5-79)),(O18945_BOSIN/5-79,((P79966_CAPAE/4-78,O19211_CAPHI/8-82),(Q30282_BOVIN/5-79,Q30812_SHEEP/4-78)))),Q30513_GALMO/8-81)),((O19279_MACMU/6-80,HB2D_CANFA/42-116),O19220_RANTA/5-79)),((((((((Q31459_MORSA/28-103,Q31463_MORSA/28-103),Q31462_MORSA/28-103),(Q08606_AULHA/25-100,Q08608_AULHA/24-99)),Q08611_CYPFR/23-98),(((Q08607_CYPFR/25-100,Q08609_CYPFR/25-100),Q31514_POERE/27-102),Q31334_AULHA/8-83)),(((Q31590_SALSA/27-102,Q31589_SALSA/41-115),Q31487_ONCMY/30-105),((Q31358_BRARE/26-101,(Q31375_CYPCA/31-106,Q31376_CYPCA/25-100)),((Q31354_BRARE/29-104,Q31369_BRARE/31-106),Q31377_CYPCA/25-100)))),(((Q31431_9PASS/37-110,Q31432_9PASS/37-111),(Q31390_CARME/16-90,(Q31392_CARME/16-90,(Q31339_AGEPH/16-90,Q31341_AGEPH/16-90)))),((Q31314_APHCE/16-90,(Q31316_APHCE/16-90,(Q31311_APHCE/16-90,(Q31315_APHCE/16-90,Q31320_APHCE/16-90)))),Q31391_CARME/16-90))),(HB2L_CHICK/8-82,((O19491_CHICK/8-82,(O19495_CHICK/8-82,O19500_CHICK/8-82)),(O19494_CHICK/8-82,(O19493_CHICK/8-82,O19492_CHICK/8-82)))))),(Q30856_OTOGA/8-82,Q30858_OTOGA/8-82)),(((Q30539_LORTA/8-82,((Q30763_MACRG/27-101,O02896_MOUSE/9-83),O02877_MUSCO/9-83)),((O19218_MONDO/42-116,O02909_MUSPL/9-83),((Q30540_LORTA/8-82,Q30765_MACRG/42-116),(O02908_MUSMA/9-83,(HB2D_RAT/40-114,Q31270_RAT/21-95))))),(HB21_MOUSE/40-114,O02879_MUSCR/9-83))),(O19274_SAGOE/6-78,(HB2P_RABIT/43-113,HB2P_HUMAN/42-114))),((HB21_SPAEH/42-114,HB2A_RAT/8-82),(Q30764_MACRG/42-116,(((O35424_MOUSE/39-113,2DOB_HUMAN/39-113),Q30827_SHEEP/39-113),(((Q06742_XENLA/41-115,Q06745_XENLA/42-116),Q06743_XENLA/41-115),P79597_XENLA/33-107))))),((Q31140_MOUSE/8-80,(Q31136_MOUSE/8-80,Q31292_9MURI/7-79)),HB2A_MOUSE/40-114)),O19246_CANFA/5-79),HB2C_PIG/45-119),P79447_BOVIN/5-79),(((HB2X_HUMAN/45-118,(HB21_HUMAN/45-119,Q95399_BOVIN/8-82)),Q30458_HORSE/41-115),((Q30694_MACMU/5-79,O02712_MACMU/5-79),((Q30338_CERAE/5-79,Q29922_HUMAN/8-82),((P79456_BOVIN/5-79,P79455_BOVIN/5-78),((HB22_HUMAN/45-119,Q30554_MACAR/5-79),P79442_BOVIN/5-79)))))),Q29783_HUMAN/8-82),(2DMB_HUMAN/27-106,Q30262_BOVIN/26-105)),P70238_MOUSE/27-106,Q31253_RAT/9-88);
(((((((((((((((((((P79466_BOVIN/8-82:0.38790,O19298_9PRIM/6-79:0.18929):0.07996,((Q31244_MUSSA/8-81:0.45293,HB2K_HUMAN/42-116:0.11552):0.07826,(O19253_CANFA/6-79:0.15484,(O19231_DELLE/5-79:0.15676,O19236_DELLE/5-79:0.09267):0.09963):0.03632):0.00000):0.02481,(((Q30854_OTOGA/8-82:0.44063,2B32_HUMAN/42-116:0.03882):0.04784,O19291_MACMU/6-80:0.16660):0.01998,(2B17_HUMAN/42-116:0.14956,Q30661_MACMU/6-80:0.12511):0.04562):0.01991):0.01429,((Q30217_HUMAN/8-82:0.91797,O19288_MACMU/6-80:0.00880):0.10398,O19287_MACMU/6-80:0.16646):0.03597):0.04070,(((Q30461_HORSE/4-78:0.21294,(((O19364_FELCA/5-79:0.14338,(O19382_FELCA/5-79:0.11506,O19396_FELCA/5-79:0.14434):0.06652):0.06467,O19378_FELCA/5-79:0.12446):0.10346,O19229_DAMDA/5-79:0.06602):0.03613):0.04621,(O18945_BOSIN/5-79:0.13846,((P79966_CAPAE/4-78:0.16814,O19211_CAPHI/8-82:0.11109):0.03347,(Q30282_BOVIN/5-79:0.16827,Q30812_SHEEP/4-78:0.08714):0.04480):0.00000):0.02804):0.02594,Q30513_GALMO/8-81:0.16514):0.01597):0.05293,((O19279_MACMU/6-80:0.34490,HB2D_CANFA/42-116:0.10737):0.04046,O19220_RANTA/5-79:0.20701):0.02026):0.04111,((((((((Q31459_MORSA/28-103:0.11686,Q31463_MORSA/28-103:0.19694):0.08502,Q31462_MORSA/28-103:0.14505):0.09424,(Q08606_AULHA/25-100:0.18023,Q08608_AULHA/24-99:0.13051):0.01191):0.08304,Q08611_CYPFR/23-98:0.21527):0.04355,(((Q08607_CYPFR/25-100:0.23818,Q08609_CYPFR/25-100:0.15454):0.03700,Q31514_POERE/27-102:0.27782):0.08031,Q31334_AULHA/8-83:0.18211):0.04803):0.27057,(((Q31590_SALSA/27-102:0.06539,Q31589_SALSA/41-115:0.22384):0.02863,Q31487_ONCMY/30-105:0.16245):0.16532,((Q31358_BRARE/26-101:0.41963,(Q31375_CYPCA/31-106:0.11386,Q31376_CYPCA/25-100:0.12020):0.08040):0.12401,((Q31354_BRARE/29-104:0.10919,Q31369_BRARE/31-106:0.15016):0.13748,Q31377_CYPCA/25-100:0.23224):0.26894):0.17695):0.12300):0.53660,(((Q31431_9PASS/37-110:0.21334,Q31432_9PASS/37-111:0.17088):0.07428,(Q31390_CARME/16-90:0.18685,(Q31392_CARME/16-90:0.03383,(Q31339_AGEPH/16-90:0.21625,Q31341_AGEPH/16-90:0.15344):0.19130):0.07390):0.04712):0.05915,((Q31314_APHCE/16-90:0.24280,(Q31316_APHCE/16-90:0.09171,(Q31311_APHCE/16-90:0.19188,(Q31315_APHCE/16-90:0.18422,Q31320_APHCE/16-90:0.15627):0.08575):0.06569):0.05407):0.03904,Q31391_CARME/16-90:0.20135):0.07004):0.08380):0.13965,(HB2L_CHICK/8-82:0.31480,((O19491_CHICK/8-82:0.10344,(O19495_CHICK/8-82:0.12268,O19500_CHICK/8-82:0.16065):0.07286):0.05755,(O19494_CHICK/8-82:0.17449,(O19493_CHICK/8-82:0.10265,O19492_CHICK/8-82:0.12866):0.05990):0.01041):0.13497):0.07470):0.14891):0.00000,(Q30856_OTOGA/8-82:0.10397,Q30858_OTOGA/8-82:0.16998):0.07941):0.01726,(((Q30539_LORTA/8-82:0.16988,((Q30763_MACRG/27-101:0.26350,O02896_MOUSE/9-83:0.09868):0.06712,O02877_MUSCO/9-83:0.11226):0.02441):0.03938,((O19218_MONDO/42-116:0.31692,O02909_MUSPL/9-83:0.08758):0.04878,((Q30540_LORTA/8-82:0.15623,Q30765_MACRG/42-116:0.18516):0.06267,(O02908_MUSMA/9-83:0.16531,(HB2D_RAT/40-114:0.17658,Q31270_RAT/21-95:0.06462):0.05950):0.06514):0.01500):0.02894):0.00000,(HB21_MOUSE/40-114:0.11855,O02879_MUSCR/9-83:0.12209):0.04991):0.02799):0.06040,(O19274_SAGOE/6-78:0.20542,(HB2P_RABIT/43-113:0.29700,HB2P_HUMAN/42-114:0.14356):0.01343):0.08887):0.04151,((HB21_SPAEH/42-114:0.28375,HB2A_RAT/8-82:0.22450):0.08343,(Q30764_MACRG/42-116:0.21926,(((O35424_MOUSE/39-113:0.17811,2DOB_HUMAN/39-113:0.08897):0.06104,Q30827_SHEEP/39-113:0.09625):0.28136,(((Q06742_XENLA/41-115:0.24977,Q06745_XENLA/42-116:0.03266):0.13107,Q06743_XENLA/41-115:0.19575):0.07294,P79597_XENLA/33-107:0.14908):0.19797):0.01854):0.11800):0.00519):0.06387,((Q31140_MOUSE/8-80:0.13865,(Q31136_MOUSE/8-80:0.18089,Q31292_9MURI/7-79:0.14513):0.06549):0.03064,HB2A_MOUSE/40-114:0.09199):0.04080):0.02584,O19246_CANFA/5-79:0.23639):0.04163,HB2C_PIG/45-119:0.19608):0.02716,P79447_BOVIN/5-79:0.08818):0.00015,(((HB2X_HUMAN/45-118:0.21971,(HB21_HUMAN/45-119:0.07581,Q95399_BOVIN/8-82:0.40132):0.03105):0.03354,Q30458_HORSE/41-115:0.12998):0.02726,((Q30694_MACMU/5-79:0.15977,O02712_MACMU/5-79:0.12745):0.07983,((Q30338_CERAE/5-79:0.19600,Q29922_HUMAN/8-82:0.08225):0.05006,((P79456_BOVIN/5-79:0.20770,P79455_BOVIN/5-78:0.22545):0.05486,((HB22_HUMAN/45-119:0.14994,Q30554_MACAR/5-79:0.14355):0.08045,P79442_BOVIN/5-79:0.13394):0.01791):0.01339):0.00000):0.05729):0.02931):0.62711,Q29783_HUMAN/8-82:0.51370):2.27154,(2DMB_HUMAN/27-106:0.10369,Q30262_BOVIN/26-105:0.31263):0.16547):0.00000,P70238_MOUSE/27-106:0.11214,Q31253_RAT/9-88:0.15033);