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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00959 alignment |
| P74105_SYNY3/97-225 | TATAACGTTATTTACGGGGGA---------......CAGCATGTCCAGGACTTGAGCGAACATCCCAAC.........---...---CGTTGCGTCAAAATTTTTATGGGGCCGAATCGGGGC---AATTGCAGTACTGCCTCTGGGCGTTACCAGTTTTTGAATACC...ACCTGGGCTGAAAAAGCGGGTAAATATCATCCCCAGCCCCAGAAATTTTTGctcTGGaaaAATTACAGCTTTGAGCCGGAGTACCAGGACCAAGTGCTTTACCGTTGGCTAGCTGATACCAAAGCC...---------------------------TGGGGGATGGATATTGGGGCCCAATTGCGGGCAGGGCATCTAGACCAGGTTTTGCGTCACCTTTCCCCCACTTGGACTAGTTTGGGCTAC---GGC.....................ATTGAGGACAATGTGATTACCAGACGTTTACCGGAA |
| Q55936_SYNY3/135-261 | TACGTTTTACTCTATGGCGGT---------......CAACATACCCATGATTTAAGTCGCCATCCCAAT.........---...---GCTTGTATTGCCATCAAAACAGATGTTAACCAAGGG---CATTGCTCCACAGCGGCAGGACGTTATCAATTTTTGACTAAG...ACTTGGCAGGAAAAAGCGGCTTTGTATCACCCT------CAACGTCATTTGggaAAAtcaCACTATAACTTTGAGCCTGAATTTCAGGATTTAGTAACCTATCGATGGTTGACCGATAAACACCAC...---------------------------TGGGGCATGGACTTTTCCACCCAATTACAACAGGGAAATATCGAACAAGTGTTGAAAAAACTTTCTGGCACTTGGACAAGTTTGGGTTAC---GGC.....................ATTGAAGACAATAGAATGACCGCTTCTTTACCCAAA |
| O30554_NEIGO/54-171 | TATCAGACGGCAATAGGTAAT---------......TATAGAATTACGGACTTCTCCCGTCACCCGGGT.........---...AACTCTGTTAGACGTAGTTTTACTCGAACCGATGGTAGTAGAAGCACATCTGATGCCTCCGGCCGCTATCAATTCATGGGATAC...ACATGGAAAGGACTGGCAAAACAATATGGCTTCACG---------------...---...------GATTTTAGTCCCGCCACACAAGACAAAGCTGCTGTCGCCTTAATTTTAGCTAAA------...---------------------------------AAAGGTGCAATGGAAGCTATTTTAAATGGCGATTACGAGCAGGCAGTCATGAAATTAGGTGGTATCTGGGCCAGCTTCCCAACAGCTCCT.....................AATGAATACCGGCAACACAAACGAAGTTGGGGTTTT |
| O80309_BP186/34-152 | TACGACGTCATTGTCACTGGCCTTGATGGCagaccaGAGATTTTCACCGATTACAGCGACCACCCTTTC.........---...---GCGCATGGCCGACCACCGAAAGTGTTTAATCGCCGTGGCGAGAAATCCACAGCCTCGGGACGTTACCAGCAGCTTTATCTG...TTCTGGCCGCACTATCAGAAACAGCTCGCATTGCCT---------------...---...------GATTTCAGCCCACTGTCGCAGGATAAGCTCGCGATCCAGTTAATCCGGGAG---------...---------------------------------CGCGGTGCTCTTGACGATATCCGGGCGGGGCGTATTGAGCGTGCTGTTTCACGTTGTCGCAATATCTGGGCGTCATTACCG------GGG.....................GCCGGTTACGGCCAGCGCGAGCACGGTCTCGAAAAG |
| LYCV_LAMBD/33-141 | TATGACGTCATTGTAGGCGGA---------......GAGCTATTTACTGATTACTCCGATCACCCT---.........---...------------CGCAAACTTGTCACGCTAAACCCAAAA---CTCAAATCAACAGGCGCCGGACGCTACCAGCTTCTTTCCCGT...TGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAA---------------...---...------GACTTCTCTCCGAAAAGTCAGGACGCTGTGGCATTGCAGCAGATTAAGGAG---------...---------------------------------CGTGGCGCTTTACCTATGATTGATCGTGGTGATATCCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCTTCACTGCCG------GGC.....................GCTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGC |
| LYCV_BPP1/55-173 | GTATGGACTGACGGGATCGGT---------......---AATACACACGGGGTAACGCCGGGTGTGCGA.........---...---------------------------------------AAAACCGACCAGCAAATCGCCGCTGATTGGGAAAAGAATATCCTG...ATCGCTGAACGCTGTATTAATCAGCACTTCCGGGGC---------------...---...---AAAGACATGCCCGATAATGCCTTCAGCGCAATGACAAGCGCGGCATTCAATATGGGATGCAATagcTTACGGACCTACTACAGCAAAGCGCGAGGCATGCGAGTCGAAACGTCCATCCACAAGTGGGCGCAGAAAGGGGAATGGGTGAATATGTGTAACCATCTCCCTGATTTCGTGAACAGTAACGGC.....................GTGCCCCTGCGAGGTTTAAAGATTCGCCGTGAAAAA |
| LYCV_BPHP1/60-178 | GTGTGGACAAATGGGGTTGGA---------......---AACACCCATAACGTAGATAAAACCAAGATT.........---...---------------------------------------TTAACCATTGATGAAGTAGCAACCGATTTACGTCGAAATATCAAA...GAAGCGGAAAATTGCATTAACACCTATTTCAACGGC---------------...---...---GAAAAGATGAATCAAGGGCAATATGACGCTATGGTGTCTTTAGCCTTTAACGTAGGCTGTGGCaacATCAAAACCTATTACAGCAAAACCCAAGGTAAACGTGTCGCAACCACGATTTATCGCGCAGCACAAGCGGAAAACTGGATATTAATGTGTAATCGTATTGAAGATTTTAACAAATCAGGCGGA.....................CGTGTGCTAAAAGGCTTACAAAACCGCAGAGCAAAA |
| Q48283_HAESO/56-167 | GTCTTAACGGTGGGCATAGGCTCCACGGAA......GCAAACGGAAAAAACATTGACCCTAAAAAACGT.........---...---------------------------------------TATAGCGACAAAGAAATAGCCCAAAGATGGGCATATGATTTACGC...CTGGCGGAACAATGCGTAAACCGCTATGGAAACGGC---------------...---...---AAAAATCTACCGCAAGGGGCGTTTGATGCCTTTGTTTCCATTACCTTTAATGTAGGATGT---...---------------------------GGAAAAATGCAAAAAAGCACCTTATTTAAACAAGCAAACCAAGGCTTTACCCCTCAACTCTGTCACCAGTTTGAACGCTGGATTTACGCAGGCGGA.....................AAAAAATTAAACGGCTTAGTAGCACGCAGAGCAAAA |
| Q54419_SERMA/62-168 | GTGTGGACGCAGGGCATTGGG---------......---CACACCGCTGGCGTCATCCCTGGTAAAGCG.........---...---------------------------------------ATCGATGAACACAAAGCCGCGATGGATTTGGTCGACGATGTTCGC...CGCACCGAGCGCGGCATGGCCGCCTGCCTGCCG------------------...---...---GATACGCTCTCGCAACAAACCTATGATGCGGCGATCGCCTTCGCTTTCAATGTGGGCGTCAGC...------------------------------GCAGCCTGCCACTCTACGCTGGTCGCGCTGCTGCAACAGCGCCAGTGGCGGCAGGCCTGCGATCAGCTGCCACGCTGGGTTTACGTAAACGGA.....................AAGAAAAACAAAGGGCTGGAACAGCGACGCGCCATG |
| LYCV_BPP21/48-155 | GTATGGACTGTATGTCACGGG---------......CATACAGGAAAAGACATCATGCTCGGTAAAACG.........---...---------------------------------------TATACCAAAGCAGAATGCAAAGCCCTCCTGAATAAAGACCTTGCC...ACGGTCGCCAGACAAATTAACCCGTACATCAAA------------------...---...---GTCGATATACCGGAAACAATGCGCGGCGCTCTTTACTCATTGCTTTACAACGTGGGTGCTGGC...------------------------------AATTTCAGAACATCGACGCTTCTTCGTAAAATAAACCAGGGCGATATCAAAGGCGCATGTGATCAGCTACGTCGCTGGACATATGCTGGCGGT.....................AAGCAATGGAAAGGTCTCATGACTCGTCGTGAGATT |
| LYCV_BPP22/29-139 | ATACCAACCATTGGGGTTGGGCATACCGGA...aaaGTGGATGGTAATTCTGTCGCATCAGGGATGACA.........---...---------------------------------------ATCACCGCCGAAAAATCTTCTGAACTGCTTAAAGAGGATTTGCAG...TGGGTTGAAGATGCGATAAGTAGTCTTGTTCGC------------------...---...---GTCCCGCTAAATCAGAACCAGTATGATGCGCTATGTAGCCTGATATTCAACATAGGTAAATCA...------------------------------GCATTTGCCGGCTCTACCGTTCTTCGCCAGTTGAATTTAAAGAATTACCAGGCAGCAGCAGATGCTTTCCTGTTATGGAAAAAAGCT---GGT.....................AAAGACCCTGATATTCTCCTTCCACGGAGGCGGCGA |
| LYCV_BPPH2/30-137 | CATTACACCATTGGTTACGGT---------......CATTACGGTTCCGATGTTTCACCTAGGCAGGTT.........---...---------------------------------------ATCACTGCTAAACAGGCTGAAGACATGTTGCGTGATGATGTGCAG...GCTTTTGTGGATGGTGTAAATAAAGCATTAAAA------------------...---...---GTATCTGTCACCCAAAATCAATTTGATGCACTTGTCTCATTCGCTTACAACGTTGGGTTA---...---------------------------GGGGCTTTCAGGTCTTCTTCTCTACTGGAATACTTGAATGAAGGAAGAACAGCTCTAGCGGCGGCTGAATTCCCTAAATGGAATAAGTCAGGCGGT.....................AAAGTTTATCAAGGGTTGATTAACCGTAGAGCACAG |
| LYCV_BPB03/30-137 | TATTATACGATTGGCTATGGA---------......CACTATGGTTCTGATGTTCACCCTTGTCAGGTG.........---...---------------------------------------ATAAGTGAGGAAAAAGCAGAGAAATTATTACGTGATGATGTTCAG...GAATTTGTTGACGGTGTTGATAAACTACTTAAA------------------...---...---GTAGATGTTACTCAAAGTCAGTTTGATGCGCTTGTGTCTTTTGCATATAACGTTGGGTTG---...---------------------------GGTGCATTAAAATCATCTACATTACTGCAGTATTTAAACGCTGGAAACTTTCAGAAGGCGGCTAATGAATTCCTGAAATGGAATAAGTCAGGAGGT.....................AAGGTGTACAACGGGCTTGTGAAGAGAAGAGAGCAG |
| LYCV_BPPHV/30-131 | ATGTACACTATCGGTTGGGGT---------......CATTATGGAGTGACAGCAGGTACAACATGG---.........---...------------------------------------------ACACAAGCTCAAGCAGATAGCCAGCTAGAGATTGACATCAATaatAAGTATGCACCTATGGTTGACGCTTACGTAAAAGGC---------------...---...------AAAGCAAATCAAAATGAGTTTGACGCCTTAGTTTCATTGGCTTATAACTGTGGT------...---------------------------------------AATGTTTTCGTTGCTGACGGTTGGGCGCCTTTCTCACATGCTTATTGTGCTTCAATGATACCGAAGTATCGTAATGCAGGCGGT.....................CAAGTCTTACAAGGCTTAGTAAGACGCAGACAGGCA |
| LYCW_ECOLI/48-166 | ATATGGACCATCTGTCGGGGT------GCCacagtgGTGGATGGAAAAACCGTTTTTCCCAATATGAAA.........---...---------------------------------------CTGTCGAAGGAAAAATGCGACCAGGTCAACGCCATTGAGCGTGAT...AAGGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCA------------...---...------CTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGTCCCTATAACATTGGCCCCGGT...------------------------------AAGTGTTTCCCGTCGACGTTTTATAAGCGGCTGAATGCTGGTGATCGTAAAGGTGCATGCGAAGCGATTCGCTGGTGGATTAAGGATGGCGGAcgcgattgccgcattcgttcaAATAACTGTTACGGTCAGGTTATTCGTCGTGACCAG |
| VG05_BPT4/197-326 | TATCCGACAATTGGTATTGGTCATCTTATC......ATGAAGCAGCCAGTTCGTGATATGGCTCAAATTaataaagttTTAtcaAAACAAGTTGGTCGTGAAATTACAGGAAATCCAGGTTCTATTACAATGGAAGAGGCGACGACTTTATTTGAGCGTGATTTGGCT...GATATGCAACGGGACATTAAATCACATTCTAAAGTAGGACCAGTCTGG---...---...---CAAGCTGTCAACCGTTCTCGTCAAATGGCGTTAGAAAATATGGCATTTCAGATGGGTGTTGGT...---------------------------GGTGTAGCTAAATTTAACACAATGTTAACTGCTATGTTAGCAGGAGATTGGGAAAAAGCGTATAAAGCCGGTCGTGATTCA---------------.....................TTGTGGTATCAACAAACAAAAGGCCGTGCATCCCGT |
| LYCV_BPT4/24-148 | TATTACACTATTGGCATCGGTCATTTGCTT......ACAAAAAGTCCATCACTTAATGCTGCTAAATCT......gaaTTAgatAAAGCTATTGGGCGTAATTGCAATGGT---------GTAATTACAAAAGATGAGGCTGAAAAACTCTTTAATCAGGATGTTGAT...GCTGCTGTTCGCGGAATTCTGAGAAATGCTAAATTAAAACCGGTTTAT---...---...---GATTCTCTTGATGCGGTTCGTCGCTGTGCATTGATTAATATGGTTTTCCAAATGGGAGAAACC...---------------------------GGTGTGGCAGGATTTACTAACTCTTTACGTATGCTTCAACAAAAACGCTGGGATGAAGCAGCAGTTAACTTAGCTAAAAGT---------------.....................ATATGGTATAATCAAACACCTAATCGCGCAAAACGA |
| O25106_HELPY/17-112 | CATCCCACGATTGGCTATGGC---------......---TATAATTTGAGCGTTTATTCTTATGAGGGT.........---...------------------------------------------AAGCGTATCACCAAAACA------TATGGGCTTTTAACTGAC...---------ATACTCTCTTATGGGTGGTATAAAAAT---------------...---...---------TTGGACGCAATGAGGAGAATGGTCATCTTGGATTTGAGCTACAATTTAGGCTTGAAC...---------------------------GGACTGCTCAAATTCAAGCAATTCATCAAGGCCATAGAGGATAAAAATTATGCTTTGGCTGTGGAGAGACTGCAAAAAAGC---------------.....................CCGTATTTCAATCAAGTGAAAAAAGAGCGTCAAGGA |