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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00945 - Rhabdo_ncap)
Rhabdovirus nucleocapsid protein
(Pfam reference: accession no. PF00945)
(Interpro reference: accession no. IPR000448)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 425 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.08)
nucleotides
(available for above)
10 sequences @ 1275 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 4.32)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 425 aa
(ave. pairwise identity: 0.35)
New Hampshire format
(total tree length: 5.64)