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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00943 - Alpha_E2_glycop)
Alphavirus E2 glycoprotein
(Pfam reference: accession no. PF00943)
(Interpro reference: accession no. IPR000936)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 410 aa
(ave. pairwise identity: 0.46)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.37)
nucleotides
(available for above)
7 sequences @ 1230 bp
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 2.79)
amino acids, restricted set
(corresp. to available nt seqs)
7 sequences @ 410 aa
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 3.10)