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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00941 phylogeny
for restricted amino acid alignment


 
(((((((((((((Q89PX9_BRAJA/4-175,Q7VS58_BORPE/4-175),(O87681_ARTNI/4-175,(Q89PE8_BRAJA/4-175,Q89GV6_BRAJA/4-175))),(P72222_PSEPU/4-174,Q59127_ARTNI/4-174)),((((Q6SF51_9BACT/2-165,O52838_BRAJA/2-168),(Q6N0U3_RHOPA/2-168,Q89XH7_BRAJA/2-168)),Q8XZD4_RALSO/2-168),(((DCMM_OLICA/4-175,(DCMM_HYDPS/4-175,Q52588_9PSED/4-175)),Q7D9X3_MYCTU/5-181),((Q976U6_SULTO/9-170,Q8ZV34_PYRAE/7-173),((Q96ZQ1_SULTO/4-173,Q97VI7_SULSO/4-174),((Q974U9_SULTO/4-169,Q97W13_SULSO/4-169),Q9Y9R9_AERPE/4-175)))))),(((((Q8UJH8_AGRT5/2-219,Q92WF7_RHIME/2-220),Q9I2H2_PSEAE/2-218),(((Q92V19_RHIME/2-221,(YAGS_ECO57/2-221,(Q8P785_XANCP/2-221,Q92XI0_RHIME/2-221))),Q9EWZ3_STRCO/2-220),Q9RK26_STRCO/2-220)),(Q92UU0_RHIME/2-217,(Q84IX9_9PROT/2-222,Q98JI6_RHILO/2-217))),(((P95637_RHOPA/5-215,Q8CJY1_STRCO/19-185),(Q6AK64_DESPS/1-173,Q98D33_RHILO/32-199)),Q8FE94_ECOL6/3-174))),(Q6MJY3_BDEBA/203-371,((((XDH_EMENI/269-448,Q7RXE4_NEUCR/237-420),(((O17505_BOMMO/28-208,(O17506_BOMMO/254-435,(Q9BIF9_CERCA/242-426,Q8I9N3_ANOGA/220-400))),((Q90W93_POERE/237-417,(Q6GMC5_XENLA/148-328,(((Q7TP79_RAT/448-628,Q9ES55_MOUSE/240-421),((ADO_MOUSE/238-418,ADO_HUMAN/239-419),ADO_BOVIN/239-419)),Q6V956_MOUSE/239-419))),(XDH_CHICK/258-438,O97896_SYNCA/228-408))),((Q6AUV1_ORYSA/268-448,Q8GUQ8_ARATH/260-440),O17892_CAEEL/259-440))),Q9EWG7_STRCO/216-384),((((Q88F21_PSEPK/195-363,Q87YY2_PSESM/195-363),Q6LPZ7_PHOPR/191-359),((Q8XXL8_RALSO/214-382,Q8RLC1_COMAC/227-399),Q6F9M6_ACIAD/202-370)),(O54050_RHOCA/176-344,(Q92VB8_RHIME/200-368,((Q98CI6_RHILO/201-369,Q8G2H3_BRUSU/200-368),(Q92UJ3_RHIME/205-373,Q8UD19_AGRT5/197-365)))))))),Q92X32_RHIME/2-174),Q9KBF1_BACHD/778-946),((Q9KEV2_BACHD/4-177,XDHC_BACSU/10-174),(Q6AIN3_DESPS/3-161,Q6LQT9_PHOPR/1-157))),(Q73PR8_TREDE/6-176,O83120_TREPA/9-178)),(((Q8LHR9_ORYSA/267-447,(O23887_MAIZE/244-417,Q7XH05_ORYSA/239-416)),Q6Z351_ORYSA/224-406),(((O23027_ARATH/228-407,Q7G9P4_ARATH/222-398),(O64417_ARATH/249-425,O64418_ARATH/218-402)),(Q9FV24_LYCES/235-418,Q7DM89_LYCES/83-266)))),(Q7PNR2_ANOGA/215-393,((Q9NCL9_CULQU/211-388,Q7Q5T1_ANOGA/206-380),Q7Q5T2_ANOGA/214-391))),Q86NS1_DROME/200-377,Q9VF50_DROME/202-379);
(((((((((((((Q89PX9_BRAJA/4-175:0.48465,Q7VS58_BORPE/4-175:0.33855):0.35190,(O87681_ARTNI/4-175:0.44768,(Q89PE8_BRAJA/4-175:0.62313,Q89GV6_BRAJA/4-175:0.48809):0.06066):0.12789):0.07650,(P72222_PSEPU/4-174:0.68803,Q59127_ARTNI/4-174:0.39734):0.11363):0.07107,((((Q6SF51_9BACT/2-165:0.35428,O52838_BRAJA/2-168:0.32071):0.07669,(Q6N0U3_RHOPA/2-168:0.19675,Q89XH7_BRAJA/2-168:0.16507):0.18374):0.12030,Q8XZD4_RALSO/2-168:0.34719):0.28292,(((DCMM_OLICA/4-175:0.50303,(DCMM_HYDPS/4-175:0.17723,Q52588_9PSED/4-175:0.46374):0.06616):0.14372,Q7D9X3_MYCTU/5-181:0.65201):0.08608,((Q976U6_SULTO/9-170:0.40834,Q8ZV34_PYRAE/7-173:0.44492):0.21658,((Q96ZQ1_SULTO/4-173:0.34113,Q97VI7_SULSO/4-174:0.44272):0.09219,((Q974U9_SULTO/4-169:0.13839,Q97W13_SULSO/4-169:0.12424):0.25761,Q9Y9R9_AERPE/4-175:0.34730):0.08996):0.09645):0.19189):0.02678):0.06830):0.30469,(((((Q8UJH8_AGRT5/2-219:0.31370,Q92WF7_RHIME/2-220:0.26149):0.07700,Q9I2H2_PSEAE/2-218:0.37812):0.11067,(((Q92V19_RHIME/2-221:0.17503,(YAGS_ECO57/2-221:0.11417,(Q8P785_XANCP/2-221:0.08126,Q92XI0_RHIME/2-221:0.12491):0.03621):0.16508):0.10182,Q9EWZ3_STRCO/2-220:0.29981):0.03970,Q9RK26_STRCO/2-220:0.20466):0.06854):0.06791,(Q92UU0_RHIME/2-217:0.36083,(Q84IX9_9PROT/2-222:0.46225,Q98JI6_RHILO/2-217:0.25468):0.17652):0.11729):0.44002,(((P95637_RHOPA/5-215:0.60591,Q8CJY1_STRCO/19-185:0.73767):0.24519,(Q6AK64_DESPS/1-173:0.71579,Q98D33_RHILO/32-199:0.56572):0.08561):0.11556,Q8FE94_ECOL6/3-174:0.78616):0.06204):0.06153):0.12001,(Q6MJY3_BDEBA/203-371:0.74193,((((XDH_EMENI/269-448:0.27367,Q7RXE4_NEUCR/237-420:0.20341):0.40878,(((O17505_BOMMO/28-208:0.49429,(O17506_BOMMO/254-435:0.34695,(Q9BIF9_CERCA/242-426:0.25340,Q8I9N3_ANOGA/220-400:0.39400):0.18878):0.07735):0.06357,((Q90W93_POERE/237-417:0.38997,(Q6GMC5_XENLA/148-328:0.38134,(((Q7TP79_RAT/448-628:0.09926,Q9ES55_MOUSE/240-421:0.14416):0.27248,((ADO_MOUSE/238-418:0.12932,ADO_HUMAN/239-419:0.13977):0.04115,ADO_BOVIN/239-419:0.08916):0.12066):0.07117,Q6V956_MOUSE/239-419:0.30272):0.15553):0.11243):0.25386,(XDH_CHICK/258-438:0.12183,O97896_SYNCA/228-408:0.28227):0.10940):0.10203):0.08810,((Q6AUV1_ORYSA/268-448:0.23210,Q8GUQ8_ARATH/260-440:0.24938):0.30350,O17892_CAEEL/259-440:0.73462):0.08997):0.15277):0.41085,Q9EWG7_STRCO/216-384:0.55761):0.07120,((((Q88F21_PSEPK/195-363:0.11499,Q87YY2_PSESM/195-363:0.13519):0.12205,Q6LPZ7_PHOPR/191-359:0.35370):0.27284,((Q8XXL8_RALSO/214-382:0.36652,Q8RLC1_COMAC/227-399:0.39528):0.09480,Q6F9M6_ACIAD/202-370:0.38693):0.14244):0.10509,(O54050_RHOCA/176-344:0.46477,(Q92VB8_RHIME/200-368:0.23401,((Q98CI6_RHILO/201-369:0.18358,Q8G2H3_BRUSU/200-368:0.09522):0.10790,(Q92UJ3_RHIME/205-373:0.30542,Q8UD19_AGRT5/197-365:0.24867):0.11396):0.08847):0.20263):0.17329):0.38373):0.03194):0.28711):0.05947,Q92X32_RHIME/2-174:0.61065):0.06942,Q9KBF1_BACHD/778-946:1.18323):0.20964,((Q9KEV2_BACHD/4-177:0.75718,XDHC_BACSU/10-174:0.66001):0.32197,(Q6AIN3_DESPS/3-161:0.80778,Q6LQT9_PHOPR/1-157:0.97476):0.16651):0.08950):0.22460,(Q73PR8_TREDE/6-176:0.38530,O83120_TREPA/9-178:0.62258):0.45878):0.43224,(((Q8LHR9_ORYSA/267-447:0.37330,(O23887_MAIZE/244-417:0.10976,Q7XH05_ORYSA/239-416:0.22606):0.15086):0.05175,Q6Z351_ORYSA/224-406:0.26836):0.16993,(((O23027_ARATH/228-407:0.25191,Q7G9P4_ARATH/222-398:0.19255):0.18444,(O64417_ARATH/249-425:0.22000,O64418_ARATH/218-402:0.36465):0.07257):0.07649,(Q9FV24_LYCES/235-418:0.12999,Q7DM89_LYCES/83-266:0.08688):0.29758):0.13443):0.42162):0.54490,(Q7PNR2_ANOGA/215-393:0.34630,((Q9NCL9_CULQU/211-388:0.33833,Q7Q5T1_ANOGA/206-380:0.20505):0.10498,Q7Q5T2_ANOGA/214-391:0.13378):0.24786):0.23707):0.25503,Q86NS1_DROME/200-377:0.14697,Q9VF50_DROME/202-379:0.16898);