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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00941 phylogeny
for amino acid alignment


 
(((((((((((((Q89PX9_BRAJA/4-175,Q7VS58_BORPE/4-175),(O87681_ARTNI/4-175,(Q89PE8_BRAJA/4-175,Q89GV6_BRAJA/4-175))),(P72222_PSEPU/4-174,Q59127_ARTNI/4-174)),((((Q6SF51_9BACT/2-165,O52838_BRAJA/2-168),(Q6N0U3_RHOPA/2-168,Q89XH7_BRAJA/2-168)),Q8XZD4_RALSO/2-168),(((DCMM_OLICA/4-175,(DCMM_HYDPS/4-175,Q52588_9PSED/4-175)),Q7D9X3_MYCTU/5-181),((Q976U6_SULTO/9-170,Q8ZV34_PYRAE/7-173),((Q96ZQ1_SULTO/4-173,Q97VI7_SULSO/4-174),((Q974U9_SULTO/4-169,Q97W13_SULSO/4-169),Q9Y9R9_AERPE/4-175)))))),(((((Q8UJH8_AGRT5/2-219,Q92WF7_RHIME/2-220),Q9I2H2_PSEAE/2-218),(((Q92V19_RHIME/2-221,(YAGS_ECO57/2-221,(Q8P785_XANCP/2-221,Q92XI0_RHIME/2-221))),Q9EWZ3_STRCO/2-220),Q9RK26_STRCO/2-220)),(Q92UU0_RHIME/2-217,(Q84IX9_9PROT/2-222,Q98JI6_RHILO/2-217))),(((P95637_RHOPA/5-215,Q8CJY1_STRCO/19-185),(Q6AK64_DESPS/1-173,Q98D33_RHILO/32-199)),Q8FE94_ECOL6/3-174))),(Q6MJY3_BDEBA/203-371,((((XDH_EMENI/269-448,Q7RXE4_NEUCR/237-420),(((((Q90W93_POERE/237-417,(Q6GMC5_XENLA/148-328,(((Q7TP79_RAT/448-628,Q9ES55_MOUSE/240-421),((ADO_MOUSE/238-418,ADO_HUMAN/239-419),ADO_BOVIN/239-419)),Q6V956_MOUSE/239-419))),(XDH_CHICK/258-438,O97896_SYNCA/228-408)),(O17506_BOMMO/254-435,((XDH_CALVI/248-432,Q9BIF9_CERCA/242-426),Q8I9N3_ANOGA/220-400))),O17505_BOMMO/28-208),((Q6AUV1_ORYSA/268-448,Q8GUQ8_ARATH/260-440),O17892_CAEEL/259-440))),Q9EWG7_STRCO/216-384),((((Q88F21_PSEPK/195-363,Q87YY2_PSESM/195-363),Q6LPZ7_PHOPR/191-359),((Q8XXL8_RALSO/214-382,Q8RLC1_COMAC/227-399),Q6F9M6_ACIAD/202-370)),(O54050_RHOCA/176-344,(Q92VB8_RHIME/200-368,((Q98CI6_RHILO/201-369,Q8G2H3_BRUSU/200-368),(Q92UJ3_RHIME/205-373,Q8UD19_AGRT5/197-365)))))))),Q92X32_RHIME/2-174),Q9KBF1_BACHD/778-946),((Q9KEV2_BACHD/4-177,XDHC_BACSU/10-174),(Q6AIN3_DESPS/3-161,Q6LQT9_PHOPR/1-157))),(Q73PR8_TREDE/6-176,O83120_TREPA/9-178)),(((Q8LHR9_ORYSA/267-447,(O23887_MAIZE/244-417,Q7XH05_ORYSA/239-416)),Q6Z351_ORYSA/224-406),(((O23027_ARATH/228-407,Q7G9P4_ARATH/222-398),(O64417_ARATH/249-425,O64418_ARATH/218-402)),(Q9FV24_LYCES/235-418,Q7DM89_LYCES/83-266)))),(Q7PNR2_ANOGA/215-393,((Q9NCL9_CULQU/211-388,Q7Q5T1_ANOGA/206-380),Q7Q5T2_ANOGA/214-391))),Q86NS1_DROME/200-377,Q9VF50_DROME/202-379);
(((((((((((((Q89PX9_BRAJA/4-175:0.48490,Q7VS58_BORPE/4-175:0.33864):0.35273,(O87681_ARTNI/4-175:0.44820,(Q89PE8_BRAJA/4-175:0.62362,Q89GV6_BRAJA/4-175:0.48723):0.06042):0.12765):0.07710,(P72222_PSEPU/4-174:0.68848,Q59127_ARTNI/4-174:0.39755):0.11346):0.07056,((((Q6SF51_9BACT/2-165:0.35449,O52838_BRAJA/2-168:0.32075):0.07656,(Q6N0U3_RHOPA/2-168:0.19701,Q89XH7_BRAJA/2-168:0.16487):0.18390):0.12076,Q8XZD4_RALSO/2-168:0.34708):0.28273,(((DCMM_OLICA/4-175:0.50242,(DCMM_HYDPS/4-175:0.17735,Q52588_9PSED/4-175:0.46387):0.06675):0.14385,Q7D9X3_MYCTU/5-181:0.65140):0.08641,((Q976U6_SULTO/9-170:0.40805,Q8ZV34_PYRAE/7-173:0.44511):0.21617,((Q96ZQ1_SULTO/4-173:0.34132,Q97VI7_SULSO/4-174:0.44269):0.09205,((Q974U9_SULTO/4-169:0.13835,Q97W13_SULSO/4-169:0.12434):0.25749,Q9Y9R9_AERPE/4-175:0.34769):0.09006):0.09721):0.19252):0.02579):0.06831):0.30277,(((((Q8UJH8_AGRT5/2-219:0.31344,Q92WF7_RHIME/2-220:0.26199):0.07718,Q9I2H2_PSEAE/2-218:0.37775):0.11109,(((Q92V19_RHIME/2-221:0.17521,(YAGS_ECO57/2-221:0.11420,(Q8P785_XANCP/2-221:0.08125,Q92XI0_RHIME/2-221:0.12495):0.03624):0.16502):0.10180,Q9EWZ3_STRCO/2-220:0.29986):0.03931,Q9RK26_STRCO/2-220:0.20488):0.06875):0.06791,(Q92UU0_RHIME/2-217:0.36116,(Q84IX9_9PROT/2-222:0.46251,Q98JI6_RHILO/2-217:0.25450):0.17618):0.11673):0.44095,(((P95637_RHOPA/5-215:0.60592,Q8CJY1_STRCO/19-185:0.73790):0.24429,(Q6AK64_DESPS/1-173:0.71604,Q98D33_RHILO/32-199:0.56609):0.08612):0.11367,Q8FE94_ECOL6/3-174:0.78843):0.06271):0.06229):0.11942,(Q6MJY3_BDEBA/203-371:0.75274,((((XDH_EMENI/269-448:0.27638,Q7RXE4_NEUCR/237-420:0.20166):0.41021,(((((Q90W93_POERE/237-417:0.39248,(Q6GMC5_XENLA/148-328:0.37784,(((Q7TP79_RAT/448-628:0.09926,Q9ES55_MOUSE/240-421:0.14429):0.27176,((ADO_MOUSE/238-418:0.12952,ADO_HUMAN/239-419:0.13980):0.04153,ADO_BOVIN/239-419:0.08872):0.12177):0.06981,Q6V956_MOUSE/239-419:0.30330):0.15973):0.11183):0.25468,(XDH_CHICK/258-438:0.12801,O97896_SYNCA/228-408:0.27636):0.10470):0.11531,(O17506_BOMMO/254-435:0.34574,((XDH_CALVI/248-432:0.21986,Q9BIF9_CERCA/242-426:0.19105):0.13804,Q8I9N3_ANOGA/220-400:0.38890):0.14971):0.11444):0.06920,O17505_BOMMO/28-208:0.47841):0.05224,((Q6AUV1_ORYSA/268-448:0.23410,Q8GUQ8_ARATH/260-440:0.24716):0.32711,O17892_CAEEL/259-440:0.71543):0.08553):0.19078):0.40108,Q9EWG7_STRCO/216-384:0.54991):0.08017,((((Q88F21_PSEPK/195-363:0.11422,Q87YY2_PSESM/195-363:0.13604):0.12298,Q6LPZ7_PHOPR/191-359:0.35220):0.27356,((Q8XXL8_RALSO/214-382:0.36646,Q8RLC1_COMAC/227-399:0.39563):0.09515,Q6F9M6_ACIAD/202-370:0.38726):0.14292):0.10648,(O54050_RHOCA/176-344:0.46802,(Q92VB8_RHIME/200-368:0.23270,((Q98CI6_RHILO/201-369:0.18336,Q8G2H3_BRUSU/200-368:0.09526):0.10786,(Q92UJ3_RHIME/205-373:0.30569,Q8UD19_AGRT5/197-365:0.24862):0.11431):0.08900):0.20015):0.17334):0.38345):0.02989):0.28315):0.06108,Q92X32_RHIME/2-174:0.60751):0.07122,Q9KBF1_BACHD/778-946:1.18167):0.20991,((Q9KEV2_BACHD/4-177:0.76078,XDHC_BACSU/10-174:0.65687):0.32172,(Q6AIN3_DESPS/3-161:0.80703,Q6LQT9_PHOPR/1-157:0.97482):0.16771):0.08949):0.22523,(Q73PR8_TREDE/6-176:0.38607,O83120_TREPA/9-178:0.62194):0.46086):0.43061,(((Q8LHR9_ORYSA/267-447:0.37355,(O23887_MAIZE/244-417:0.10988,Q7XH05_ORYSA/239-416:0.22604):0.15082):0.05192,Q6Z351_ORYSA/224-406:0.26861):0.16977,(((O23027_ARATH/228-407:0.25202,Q7G9P4_ARATH/222-398:0.19264):0.18457,(O64417_ARATH/249-425:0.22024,O64418_ARATH/218-402:0.36455):0.07268):0.07679,(Q9FV24_LYCES/235-418:0.13003,Q7DM89_LYCES/83-266:0.08693):0.29723):0.13426):0.42279):0.54482,(Q7PNR2_ANOGA/215-393:0.34682,((Q9NCL9_CULQU/211-388:0.33841,Q7Q5T1_ANOGA/206-380:0.20509):0.10505,Q7Q5T2_ANOGA/214-391:0.13377):0.24762):0.23735):0.25471,Q86NS1_DROME/200-377:0.14712,Q9VF50_DROME/202-379:0.16893);