EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00877 alignment
(30 sequences with 513 bp)


O24914_HELPY/301-437 GGGCAA...AAATACGGCTGGGGCGGGCTATTGGGT---------........................------...AATAGGGATTGCTCGGCTTTCACCAGAGATAGTTTTGCTAATTTT---GGTATTTTGCTCCCCAGAAATTCCTATGCGCAA......------AGCCGTTATGCGAAC......AATTATGTGGATTTAAGCTCTATGAAAGCCAAAGAAAAAGAAGACTACATCCTTAAAAACGCCACGCCTTTTGGAACGCTCATCTATTTAAAAGGG...------------------------CATATCATGCTTTATTTAGGCGCACACAACcatcaagcgatagtcgctcacagcatttggtcggtgCAAACCCAAAAGCATTTTAAAACCTTG------AGCCATAAAATAGGAGGCGTGgtgATCactTCGTTATGG...TTAGCTGAAGAGCATAATGGGGCGTTTTCTAAAAAGAAATTATTGATTGATAGGGTG
P74160_SYNY3/112-245 AGGGAAaatTACTATCTTTGGGGAGGTAATATCGGCCCC------........................------...AACTACGACTGTTCCGGTTTAATGCAAGCCGCTTTTGCTAGTCAA---GGTATTTGGCTACCCAGGGATTCCTATCAACAGgccgccTTTTGTCAGCAAGTAGTTGAT......GTGAGGCCCCAACGGCGATCGGGAGAATTAAACCAAGTAATGGTGGAGGCGATCGCCAAGGAATTTTTACCGGGGGATTTAATTTTTTTTGGCAAT...------------CAACGGGTGGATCATGTGGGAATGTATCTG------------....................................GGGGAAGGAAAATATATCCACAGTTCTGGCAAAACCCATGGCCGCAACGGTATTggcATCgatTCCCTCACCgatTTAACGGATCCCATTAGCCATAAATATTTTCAAAAATGGTGGTTCTGTGGCCGGGTT
DPP6_BACSH/163-263 GCCACA...CCGTATCGTTGGGGAGGTAAGTCACCGCTA------........................------...GGCATTGATTGTTCGGGCTTATGTTCGATGGCTTATCTGCTAAAT---GGCGTAATTATTTTCCGAGATGCTAGAATAGTA......---------------------......---------------------------GAAGGTTTTCCAATTAAGGAGATAACAATTGATCGTATGCAAAAAGGAGATTTGCTATTTTTCCCAGGG...------------------------CATGTAGCACTGTATCTA------------....................................GGGCAGACTCTTTATGTTCATGCCTCACTTGGTGGCAATGAGGTCAAT------...---...---------...---GTCAATAGCCTAGATGAACAACACCCGTTATATCGCCAAGATTTAGCAACGACT
O35010_BACSU/185-292 GGCCTT...CCCTACCTGTGGGGAGGGATCAGCGGGTTT------........................------...GGGTTTGATTGCTCCGGATTTATGTACAGTATATTTAAGGCGAAT---GGATACAGCATCCCCCGTGATGCGGGAGATCAG......---------------------......------------------------------GCTAAGGCAGGGAAGGTTGTCCCGCTTGATGATATGAAAGCCGGTGATCTGCTGTTTTTTGCTTAT...GAGGAAGGAAAAGGAGCGATTCATCACGTCGGTCTGTATGTA------------....................................GGCGGCGGGAAAATGCTTCATTCTCCAAAGACAGGGAAGTCAATCGAA------...---...---------...---ATCCTCACATTAACAGAGACAATCTATGAAAAAGAATTATGTGCGGTGCGCCGC
YDHO_ECOLI/153-263 GGTAAG...CCATATCGTTGGGGTGGCAGCTCACCGCGTACC---........................------...GGTTTTGATTGCAGCGGCCTGGTTTATTACGCTTATAAAGATTTGGTGAAAATTCGTATTCCGCGTACGGCGAATGAAATG......---------------------......------------------------TATCACCTGCGTGATGCAGCGCCAATCGAACGTAGTGAACTGAAAAACGGCGACCTGGTCTTTTTCCGTACT...---CAGGGACGCGGCACAGCCGATCATGTCGGCGTGTATGTC------------....................................GGCAACGGCAAATTTATTCAGTCACCGCGCACAGGTCAGGAAATTCAA------...---...---------...---ATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGG
YAFL_ECOLI/131-241 GGCAAG...CCTTACGTCTGGGGCGGTACGCGGCCTGATAAA---........................------...GGCTTTGACTGTAGCGGGTTGGTTTTTTATGCCTACAACAAGATCCTTGAGGCTAAGCTCCCGCGCACGGCCAATGAGATG......---------------------......------------------------TACCACTATCGCCGGGCAACGATTGTGGCGAACAACGACCTGCGCCGGGGAGATTTGCTGTTTTTCCATATC...---CACAGCCGCGAGATAGCCGATCATATGGGCGTGTATTTG------------....................................GGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGG------...---...---------...---ATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGG
P60_LISIN/364-466 GGAAAA...GCTTACTCTTGGGGTGGTAACGGACCAACT------........................------...ACATTTGATTGCTCCGGTTTCACTAAATATGTATTCGCTAAATCT---GGAATTTCTCTTCCACGTACTTCTGGCGCACAA......---------------------......------------------------------TACGCTAGCACTACAAGAATTTCCGAATCACAAGCAAAACCTGGTGATTTAGTATTCTTTGACTAT...---------GGTAGCGGAATTTCTCACGTTGGTATTTACGTT------------....................................GGTAATGGTCAAATGATTAACGCGCAA------GACAATGGCGTTAAG------...---...---------...---TATGATAATATCCACGGCGCTGGCTGGGGTAAATTCCTAGTTGGCTTCGGTCGC
P60_LISGR/408-510 GGCAAA...CCTTATACTTGGGGAGCTAGAGGCCCAAGC------........................------...ACATTTGACTGCTCTGGTTTCACTAGCTATGTTTTCAATCAAGTA---GGTCTTAGCCTTTCTGGAAACTCTGCAACACAA......---------------------......------------------------------TATGCAAACTCTACAAAGATCTCTGAATCGCAAGCACAACCAGGCGACTTGGTATTCTTTAACTAC...---------GGCAGCGGCATCGCCCACGTTGGTATCTACATC------------....................................GGCGGCGGACAAATGATCGATGCACAA------GATAACGGCGTTTCT------...---...---------...---ATCGATAATATCCATGGAAATGGTTGGGGACAATATCTAGTTGGCTTCGGTCGC
Q47734_ENTFA/224-330 GGCTGG...CGATACGTTTACGGTGGAGCTTCCCCGACTACT---........................------...TCTTTTGATTGTAGCGGACTGACACAATGGACGTATGGAAAAGCT---GGAATTAACTTACCACGAACCGCACAACAGCAA......---------------------......------------------------TATGATGTGACCCAGCAT------ATCCCACTATCGGAAGCACAAGCTGGCGATTTGGTTTTCTTTCATTCTaccTATAACGCTGGCTCTTATATTACTCATGTTGGGATATACCTT------------....................................GGCAATAACCGTATGTTTCATGCA---------GGCGACCCAATCGGT------...---...---------...---TATGCCGACTTAACAAGCCCCTACTGGCAACAGCATTTAGTGGGAGCAGGACGA
YDDH_BACSU/221-327 GGGCAA...CCGTATGCCTGGGGAGGTTCAAACCCGGAAACT---........................------...GGATTTGATTGTTCTGGCCTTGTTCAGTGGTCTTTTGCGAAAGCT---GGAATCACTCTTCCTAGAACAGCACAAGAACAA......---------------------......------------------------CATGGGGCAACCAAGAAA------ATAAGTGAAAAAGAAGCGACTGCGGGTGACTTAGTGTTCTTTGGCGGC...ACATACGAAGGAAAAGCCATTACTCACGTCGGCATCTATGTA------------....................................GGCAATGGCAGAATGTTTAATTCAAAT------GACAGTGGAATCCAA------...---...---------...---TATTCTGATCTGAAATCAGGTTACTGGAGAGATCACCTTGTATCTTTTGGACGC
PGDS_BACSU/178-285 GGTGTC...CCATATGTGTTTGGCGGAAGCACGCCGTCAGAG---........................------...GGCTTTGATTGCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTACCGCGATCAGCCGAACAGCAG......---------------------......------------------------TGGGCAGTGGGCGAGAAG------GTAGCCCCTCAGAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAAT...---ACGTATAAAACGGGAATTTCACATGCAGGCATTTATGCG------------....................................GGCGCAGGCAGGTTCATTCAGGCAAGC---CGGTCAGAAAAAGTAACC------...---...---------...---ATTTCCTATTTGTCAGAGGATTACTGGAAATCGAAGATGACGGGTATTCGCCGA
YOJL_BACSU/311-412 GGAGTG...CCTTACCGATGGGGCGGAAACACGCCTGCC------........................------...GGTTTTGATTGCAGCGGCTTCATTTATTACCTCATTAATAATGTATCATCTATATCAAGATTGAGTACGGCAGGGTATTGG......---------------------......---------------------------------------AATGTCATGCAGAAAGTCAGCCAGCCGTCAGTAGGAGACTTTGTCTTCTTTACCACA...------TATAAATCCGGCCCGTCTCACATGGGGATTTATCTA------------....................................GGCGGCGGTGATTTTATTCATGCAAGC------TCATCGGGCGTCGAC------...---...---------...---ATTTCCAATCTCAGCAATTCGTATTGGAAACAGCGGTACTTGGGCGCAAGAAGT
LYTF_BACSU/385-486 GGGGTT...CCGTATCGCTGGGGAGGCACGACACCGTCC------........................------...GGGTTTGACTGCAGCGGATTCATTTACTATGTACTGAACAAAGTCACATCCGTATCTAGATTAACGGCAGCGGGATATTGG......---------------------......---------------------------------------AACACAATGAAATCAGTTAGCCAGCCTGCTGTCGGAGATTTCGTTTTCTTTTCAACA...------TATAAAGCCGGCCCTTCCCACGTCGGAATTTACCTA------------....................................GGCAACGGGGAATTCATAAATGCCAAC------GATTCCGGAGTTGTC------...---...---------...---ATTTCCAATATGAACAACTCTTACTGGAAACAGCGCTATCTCGGTGCAAAACGA
LYTE_BACSU/232-333 GGAACG...CCATATAAATGGGGCGGAACGACAACTTCA------........................------...GGCTTTGACTGCAGCGGATTCATTTGGTACGTACTGAATAAACAAACAAGTGTGGGCAGAACAAGCACTGCAGGATACTGG......---------------------......---------------------------------------AGTTCTATGAAGAGCATTGCCAGCCCGTCTGTTGGTGATTTCGTCTTCTTCACAACA...------TATAAATCCGGCCCTTCTCACATGGGGATTTACATT------------....................................GGAAACAACAGTTTCATTCATGCAGGA------TCTGACGGCGTACAA------...---...---------...---ATCAGCAGCCTGAACAACAGCTACTGGAAGCCTCGTTACCTCGGTGCGAAAAGA
NLPC_ECOLI/47-153 GGCACG...CCGTATCGTTATGGTGGCATGACGCGGCGC------........................------...GGTGTGGACTGTTCGGGATTTGTGGTTGTGACGATGCGCGATCGTTTCGATTTGCAGCTGCCCCGTGAAACCAAACAACAA......---------------------......------------------------GCCTCTATTGGCACGCAA------ATTGATAAAGACGAGTTGCTGCCAGGTGACCTGGTCTTTTTCAAAACG...---GGGTCCGGACAAAATGGTTTGCATGTAGGTATTTACGAT------------....................................ACCAACAACCAATTTATCCACGCCTCT---ACCAGCAAGGGAGTGATG------...---...---------...---CGTTCCTCACTTGATAATGTCTATTGGCAGAAAAATTTCTGGCAGGCGAGACGA
Y1314_HAEIN/54-160 GGTACA...CCTTATGTGCTCGGCGGCGTTTCTCGTCGT------........................------...GGGGTAGATTGTTCTGGTTTTGTGCAGAAAACTTTCTTCGATCGTTTTAATCTTCGTTTGCCTAGAAGCACTGTTGAACAA......---------------------......------------------------GCTAATTATGGTAAACAT------GTACGCAAAGAAGATATTCAAACTGGCGATTTAATTTTCTTTAAAACT...---GGCAGAGGCCCTAATGGTTATCATGTGGGGATTTATGTA------------....................................AAAGAAGATAAATTCCTTCATGCTTCC---ACCAGAGGGGGAGTCGTC------...---...---------...---TATTCTTCAATGAATAACCCTTATTGGTCGAAAGCCTTCTGGCAAGTCAGACGG
NLPC_HAEIN/80-181 GGCACT...CGCTATCGTATGGGCGGTACCACTAAACGT------........................------...GGTATTGATTGTTCAGCATTTATGCAAACTACTTTTTCTGAAGTTTTTGGTATTGAATTGCCTCGTTCTACGGCTGAACAG......---------------------......------------------------CGTCATTTAGGTAGAAAA------ATTAATAAATCAGAACTTAAAAAAGGCGATTTAGTTTTCTTCCGTAAA...------------------AATAATCACGTTGGTGTTTATATT------------....................................GGTAATAACCAATTTATGCACGCAAGT---ACAGGGCAAGGCGTGACA------...---...---------...---ATAAGTTCCCTTGATGAAAAATATTGGGCTAGAACCTACACTCAATCGCGTCGT
SPR_ECOLI/79-183 GGCGTA...CGTTATCGTCTGGGCGGCAGCACTAAAAAA------........................------...GGTATCGATTGTTCTGGTTTCGTACAGCGTACATTCCGTGAGCAATTTGGCTTAGAACTTCCGCGTTCGACTTACGAACAG......---------------------......------------------------CAGGAAATGGGTAAATCT------GTTTCCCGCAGTAATTTGCGTACGGGTGATTTAGTTCTGTTCCGTGCC...---------GGTTCAACGGGACGCCATGTCGGTATTTATATC------------....................................GGCAACAATCAGTTTGTCCATGCTTCC---ACCAGCAGTGGTGTTATT------...---...---------...---ATTTCCAGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGG
YVCE_BACSU/355-469 GGACAAtctCCGTACAAGTTTGGCGGCGGACGCACTCAGTCTGATatc.....................AACAACcgtATTTTTGACTGCTCATCATTCGTACGCTGGGCATACGCTTCTGCA---GGTGTTAACCTTGGACCTGTAGGCGGAACAACA......---------------------......------------------ACTGATACGTTAGTTGGCAGAGGACAAGCTGTCAGCGCGTCTGAAATGAAACGCGGAGACCTTGTGTTCTTTGACACT...---------TACAAAACAAATGGACACGTAGGAATCTACTTA------------....................................GGAAACGGTACTTTCCTAAACGACAAT---ACATCTCATGGCGTATCT------...---...---------...---GTTGACTCTATGAGCAATCCTTACTGGAAAGCAGCATTTAAAGGTGTTGTAAGA
P71594_MYCTU/182-281 GGCCGT...CCCTATGTCTGGGGCGCAACGGGGCCCAAC------........................------...CAGTTCGACTGTTCCGGTTTGGTCCAGTGGGCCTACGCCCAGGCG---GGTGTTCACCTGGATCGCACCACCTATCAACAG......---------------------......------------------------------ATCAACGAGGGGATCCCGGTGCCGCGCTCACAGGTCCGGCCGGGCGATCTGGTCTTCCCGCACCCC...---------------------GGGCACGTGCAGCTGGCGATC------------....................................GGCAACAATCTGGTCGTCGAGGCGCCCCATGCGGGCGCGTCGGTTCGG------...---...---------...---GTCAGCTCGCTGGGCAACAACGTGCAGATTCGGCGACCGCTGAGTGGCAGA---
O07391_MYCAV/127-243 GGGGTG...CCGTACTCGTGGGGCGGCGGCTCGCTGGACGGTCCCagcaagggtgtcggcgacggcgccAACATCaccGGGTTCGACTGTTCGGGGCTGATGCGCTACGGCTTCGCCGGGGTC---GGCGTGCTGATCCCGCGGTTCTCCGGCGACCAG......---------------------......------------------------TACAACGCCGGGCGTCAC------ATCCCGCAGGACCAGGCCCGCCGCGGCGACCTCATCTTCTACGGCCCG...------------GGCGGGTCCCAGCACGTCACCATGTACCTG------------....................................GGCAACGGGCAGATGCTCGAGGCGTCCGGCAGCGCCGGCAAGGTCACC------...---...---------...---GTCAGCCCGGTGCGCAAGCCCGGCATGACGCCGTTCCTGACTAGGATCATCGAG
O07390_MYCAV/156-272 GGGGTG...CCCTACTCCTGGGGCGGCGGCAACGCGGCCGGCCCCagcaagggcatcgactccggcgccAACATCgtcGGCTTCGACTGTTCGGGGCTGGTGCTGTATTCGTTCGCCGGGGTG---GGCATCAAGCTGCCGCACTACTCGGGCTCGCAG......---------------------......------------------------TACAACCTGGGCCGCAAG------ATCCCGTCCTCGCAGATGCGCCGCGGCGACGTCATCTTCTACGGACCG...------------GGCGGCTCCCAGCACGTCACCATCTACCTC------------....................................GGCGACGGCCAGATGCTCGAGGCGCCCGATATCGGGTTGAAGGTCCGC------...---...---------...---GTCGCCCCCGTCCGCACCAGCGGCATGACGCCCTACGTGGTCCGTTACATCGAG
O06624_MYCTU/55-168 GGCGTG...CCGTTCTCCTGGGCCGGCGGCGGCATCAGCGGCCCCacgcgcggcaccggtaccggcatcAACACCgtcGGGTTCGACGCCTCCGGTTTGATCCAGTACGCCTATGCCGGTGCC---GGGCTAAAGCTGCCGCGTTCTTCCGGCCAGATG......---------------------......------------------------TACAAGGTTGGGCAAAAG------GTCCTGCCGCAGCAAGCGCGCAAGGGCGACCTGATCTTCTACGGCCCC...------------GAAGGCACGCAAAGCGTCGCGTTATACCTC------------....................................GGGAAGGGCCAGATGCTGGAGGTG---------GGCGACGTCGTCCAG------...---...---------...---GTTTCGCCGGTGCGCACCAACGGCATGACGCCTTACCTGGTCCGGGTTCTCGGG
P94618_CLOBE/412-511 GGTGTA...CCTTATGTATGGGGTGGTACAGATCCTAGT------........................------...GGATTCGATTGTTCAGGCTTAGTTATGTATTGTTATGCACACTTT---GGAGTAAATCTCCCACATTATACAGGAGATCAA......---------------------......------------------------------------GTTAAATATGGAACTGTTGTTACAAACCTTCAACCAGGAGATTTATTATTCTTCGGTTCT...---------ACATCTGATCCTTATCATGTAGCTATTTATTCA------------....................................GGTAATGGTTATATGATAGAGGCTCCAAAAACTGGTGAAACTGTTCAC------...---...---------...---GAAACACCTATTAGATCATACTCTATAGCAAAGAGAATATTTAAT---------
Q51835_PORGI/68-178 GGCAAA...CCCTACAGGTATCAGGGGCCATCGTCTTGG------........................------...CCGATGGATTGCTCCGGCTACGTGGCCTACCTCTATTCCTGCTAC---GATATTCATATTCCACGCTCTTCATCGGCACTG......---------------------......------------------------------------TACAACTATACCATTCCCATACGCCATCCTCTACCGGGTGATCTGCTTTTCTTCCGTGGTagcAAGAATCACAAAGGGACTATCGGCCATGTGGCACTGTTGATCGAAGTTTGCGAT....................................GACGAACTAATCATGCTACACAACACCAATAGCAGAGGTATTATCATC------...---...---------...---GAATCACTGCAACGAAGTTCGTACTTCAGCAAGCGTTACATCGTGCCGGTCGTT
Q9FZU5_9VIRU/118-229 GGGCGT...GTATTCGAATACGGC---------------------........................------...AAGACGGATTGCGGCGCGCTGGTGCGCGATGCCTTCATGCTGATG---GGGCTGGTTTTTCCCGACCATCCACGCGGTGAT......---ATGGATGAGGACGCAGCG......GCGGGCTTTTGGGAAAAGCATTTGGAAAACTGCGGGTTTTCC------CGTGTTTCAGACGGCCTTTGCGCCGGCGATGTGGTCTTGACGGCAACG...---------GGCGGGCATGCGTCCCATGCCGTCCTGTATTTG------------....................................GGCAACGACTGGATGCTGCACCATGCC------TACAATCAATTGAGC------...---...---------...---TGCCGTGTACCTTATACCCGCTATTGGGCGGATGTTACGCACAGCGTTTGGCGG
Q9RIE1_YERPE/136-252 GGTCGA...CCCTATGTGTTCGGT---------------------........................------...GTCTTCGACTGCTGGATGCTGTGCCGCGACTACCTGAAGCGTGAGTTCAACGTCGAGCTGAATCCGAACCCGCACCTGCAT...attCCATCGTGGTACACGGGCGAT......ACCGACATTCTCGATCAGAACTACCGCAATGAAGGGCTTGTTCGTCTGGCGCCGGGGACGGAACCCCAGCGTGGTGACGTCTTCTTCATTCAGTAC...---------GGAAAGATGCCTGACCACTGCGCGGTGTACATC------------....................................GGAGACGGAATGATCCTGCACCACCAG------ATCGACCGTCTGAGC------...---...---------...---TGTCGCGCTTATTACGGTGGCATGTACCAGAAACACACGACGCACCACCTGCGT
Q45906_COXBU/3-116 ---CGG...CCGTTTATTTATAGT---------------------........................------...GTCTATGATTGCTATTCATTAGCCAGAGATTATTACAAAAAGAATTTTGGGATTAAGTTGAATGATTACGATCGGCCAGAT......---TTTTGGTGGGAGAAAGAC......GCTAATTTATATATGGAGAATTATAAAAAAGAAGGATTTAAAGAA---ATACCCGCGAAAGAGTTGCGCTGTGGAGATCTTATTTTAATGAAAATA...------AATTCTCCGGTCCCAAATCATATTGCTATTTATCTT------------....................................GGGAATGGAGAGATACTCCACCACCTT------GAGTTGCAACCGAGT------...---...---------...---AAACGCGAGGATTACAGGGAAAAGTGGCGAAAGAAATCAGTGCTTTTCTTGCGG
Q9I5S7_PSEAE/119-250 GGCCGC...GAGTTCGCCCACGGC---------------------........................------...GTGCTCGACTGCTGGAGCCTCTGTCGCGACTGGTACCGCCGCGAGGCAGGTTTGGAGCTTCCGGACTATCCGCGCCGCGAC......---GGTTGGTGGGAAACCGGC......GAGAGCCTCTACGAGCAGCACTATGCGGCGGCTGGATTCCGGCCG---GTGCCGCTGGCCGGAATCCGCCGCGGCGACATGCTGGTGATGCAGGTC...---GGGAGGGCGCTGCACCCGAACCACGCGGGCATCTACCTGGGCAATGACTGGcgtctggacagcgagccggtccaggcgctcggcggcGACGGACCGTTCCTGCTGCACCACCTG------TACGGACGGCTGTCG------...---...---------...---ACCCGCGACGTGTTCGGCGGACCCTGGATCGAACGCACGCGCCTGGTCTTGCGG
Q9MCU3_BPHK0/116-231 GAGCGT...CCGTTTGTGCTTGGA---------------------........................------...CACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGGTATCGAGCTCCACGATTACCGGGTGGATTAT......---CCCTGGTGGGAAAACGCCtatccgGACAATTTTTATCAGGATTGCTGGTATGAATGCGGATTCAGG------GAGTTTGACGGCCCGCCTCAGGAAGGGGACCTCGTCATCATGCAGGTG...------CAGGCCGATAAGTGGAATCATGCCGGGATTTTACTG------------....................................GAGGGTAACATGCTGCTGCACCACCTG------TACGGACATCTGAGC------...---...---------...---CAGCGCGTGCCGTATGGGGGCTACTGGCAGGAAAGGACGATGAAGATTCTTAGA