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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00877 alignment
(31 sequences with 171 aa)


O24914_HELPY/301-437 GQ.KYGWGGLLG---........--.NRDCSAFTRDSFANF-GILLPRNSYAQ..--SRYAN..NYVDLSSMKAKEKEDYILKNATPFGTLIYLKG.--------HIMLYLGAHNhqaivahsiwsvQTQKHFKTL--SHKIGGVvItSLW.LAEEHNGAFSKKKLLIDRV
P74160_SYNY3/112-245 REnYYLWGGNIGP--........--.NYDCSGLMQAAFASQ-GIWLPRDSYQQaaFCQQVVD..VRPQRRSGELNQVMVEAIAKEFLPGDLIFFGN.----QRVDHVGMYL----............GEGKYIHSSGKTHGRNGIgIdSLTdLTDPISHKYFQKWWFCGRV
DPP6_BACSH/163-263 AT.PYRWGGKSPL--........--.GIDCSGLCSMAYLLN-GVIIFRDARIV..-------..---------EGFPIKEITIDRMQKGDLLFFPG.--------HVALYL----............GQTLYVHASLGGNEVN--.-.---.-VNSLDEQHPLYRQDLATT
O35010_BACSU/185-292 GL.PYLWGGISGF--........--.GFDCSGFMYSIFKAN-GYSIPRDAGDQ..-------..----------AKAGKVVPLDDMKAGDLLFFAY.EEGKGAIHHVGLYV----............GGGKMLHSPKTGKSIE--.-.---.-ILTLTETIYEKELCAVRR
YDHO_ECOLI/153-263 GK.PYRWGGSSPRT-........--.GFDCSGLVYYAYKDLVKIRIPRTANEM..-------..--------YHLRDAAPIERSELKNGDLVFFRT.-QGRGTADHVGVYV----............GNGKFIQSPRTGQEIQ--.-.---.-ITSLSEDYWQRHYVGARR
YAFL_ECOLI/131-241 GK.PYVWGGTRPDK-........--.GFDCSGLVFYAYNKILEAKLPRTANEM..-------..--------YHYRRATIVANNDLRRGDLLFFHI.-HSREIADHMGVYL----............GDGQFIESPRTGETIR--.-.---.-ISRLAEPFWQDHFLGARR
P60_LISIN/364-466 GK.AYSWGGNGPT--........--.TFDCSGFTKYVFAKS-GISLPRTSGAQ..-------..----------YASTTRISESQAKPGDLVFFDY.---GSGISHVGIYV----............GNGQMINAQ--DNGVK--.-.---.-YDNIHGAGWGKFLVGFGR
P60_LISGR/408-510 GK.PYTWGARGPS--........--.TFDCSGFTSYVFNQV-GLSLSGNSATQ..-------..----------YANSTKISESQAQPGDLVFFNY.---GSGIAHVGIYI----............GGGQMIDAQ--DNGVS--.-.---.-IDNIHGNGWGQYLVGFGR
Q47734_ENTFA/224-330 GW.RYVYGGASPTT-........--.SFDCSGLTQWTYGKA-GINLPRTAQQQ..-------..--------YDVTQH--IPLSEAQAGDLVFFHStYNAGSYITHVGIYL----............GNNRMFHA---GDPIG--.-.---.-YADLTSPYWQQHLVGAGR
YDDH_BACSU/221-327 GQ.PYAWGGSNPET-........--.GFDCSGLVQWSFAKA-GITLPRTAQEQ..-------..--------HGATKK--ISEKEATAGDLVFFGG.TYEGKAITHVGIYV----............GNGRMFNSN--DSGIQ--.-.---.-YSDLKSGYWRDHLVSFGR
PGDS_BACSU/178-285 GV.PYVFGGSTPSE-........--.GFDCSGLVQYVFQQALGIYLPRSAEQQ..-------..--------WAVGEK--VAPQNIKPGDVVYFSN.-TYKTGISHAGIYA----............GAGRFIQAS-RSEKVT--.-.---.-ISYLSEDYWKSKMTGIRR
YOJL_BACSU/311-412 GV.PYRWGGNTPA--........--.GFDCSGFIYYLINNVSSISRLSTAGYW..-------..-------------NVMQKVSQPSVGDFVFFTT.--YKSGPSHMGIYL----............GGGDFIHAS--SSGVD--.-.---.-ISNLSNSYWKQRYLGARS
LYTF_BACSU/385-486 GV.PYRWGGTTPS--........--.GFDCSGFIYYVLNKVTSVSRLTAAGYW..-------..-------------NTMKSVSQPAVGDFVFFST.--YKAGPSHVGIYL----............GNGEFINAN--DSGVV--.-.---.-ISNMNNSYWKQRYLGAKR
LYTE_BACSU/232-333 GT.PYKWGGTTTS--........--.GFDCSGFIWYVLNKQTSVGRTSTAGYW..-------..-------------SSMKSIASPSVGDFVFFTT.--YKSGPSHMGIYI----............GNNSFIHAG--SDGVQ--.-.---.-ISSLNNSYWKPRYLGAKR
NLPC_ECOLI/47-153 GT.PYRYGGMTRR--........--.GVDCSGFVVVTMRDRFDLQLPRETKQQ..-------..--------ASIGTQ--IDKDELLPGDLVFFKT.-GSGQNGLHVGIYD----............TNNQFIHAS-TSKGVM--.-.---.-RSSLDNVYWQKNFWQARR
Y1314_HAEIN/54-160 GT.PYVLGGVSRR--........--.GVDCSGFVQKTFFDRFNLRLPRSTVEQ..-------..--------ANYGKH--VRKEDIQTGDLIFFKT.-GRGPNGYHVGIYV----............KEDKFLHAS-TRGGVV--.-.---.-YSSMNNPYWSKAFWQVRR
NLPC_HAEIN/80-181 GT.RYRMGGTTKR--........--.GIDCSAFMQTTFSEVFGIELPRSTAEQ..-------..--------RHLGRK--INKSELKKGDLVFFRK.------NNHVGVYI----............GNNQFMHAS-TGQGVT--.-.---.-ISSLDEKYWARTYTQSRR
SPR_ECOLI/79-183 GV.RYRLGGSTKK--........--.GIDCSGFVQRTFREQFGLELPRSTYEQ..-------..--------QEMGKS--VSRSNLRTGDLVLFRA.---GSTGRHVGIYI----............GNNQFVHAS-TSSGVI--.-.---.-ISSMNEPYWKKRYNEARR
YVCE_BACSU/355-469 GQsPYKFGGGRTQSDi.......NNrIFDCSSFVRWAYASA-GVNLGPVGGTT..-------..------TDTLVGRGQAVSASEMKRGDLVFFDT.---YKTNGHVGIYL----............GNGTFLNDN-TSHGVS--.-.---.-VDSMSNPYWKAAFKGVVR
P71594_MYCTU/182-281 GR.PYVWGATGPN--........--.QFDCSGLVQWAYAQA-GVHLDRTTYQQ..-------..----------INEGIPVPRSQVRPGDLVFPHP.-------GHVQLAI----............GNNLVVEAPHAGASVR--.-.---.-VSSLGNNVQIRRPLSGR-
O07391_MYCAV/127-243 GV.PYSWGGGSLDGPskgvgdgaNItGFDCSGLMRYGFAGV-GVLIPRFSGDQ..-------..--------YNAGRH--IPQDQARRGDLIFYGP.----GGSQHVTMYL----............GNGQMLEASGSAGKVT--.-.---.-VSPVRKPGMTPFLTRIIE
O07390_MYCAV/156-272 GV.PYSWGGGNAAGPskgidsgaNIvGFDCSGLVLYSFAGV-GIKLPHYSGSQ..-------..--------YNLGRK--IPSSQMRRGDVIFYGP.----GGSQHVTIYL----............GDGQMLEAPDIGLKVR--.-.---.-VAPVRTSGMTPYVVRYIE
O06624_MYCTU/55-168 GV.PFSWAGGGISGPtrgtgtgiNTvGFDASGLIQYAYAGA-GLKLPRSSGQM..-------..--------YKVGQK--VLPQQARKGDLIFYGP.----EGTQSVALYL----............GKGQMLEV---GDVVQ--.-.---.-VSPVRTNGMTPYLVRVLG
P94618_CLOBE/412-511 GV.PYVWGGTDPS--........--.GFDCSGLVMYCYAHF-GVNLPHYTGDQ..-------..------------VKYGTVVTNLQPGDLLFFGS.---TSDPYHVAIYS----............GNGYMIEAPKTGETVH--.-.---.-ETPIRSYSIAKRIFN---
P54_ENTFC/414-516 GT.PYVWGGKDPS--........--.GFDCSGFTRYVYLQVTGRDIGGWTVPQ..-------..--------ESAGTK--ISVSQAKAGDLLFWGS.---AGGTYHVAISL----............GGGQYIHAPQPGENVK--.-.---.-VGSVQ---WYTPDFAVSM
Q51835_PORGI/68-178 GK.PYRYQGPSSW--........--.PMDCSGYVAYLYSCY-DIHIPRSSSAL..-------..------------YNYTIPIRHPLPGDLLFFRGsKNHKGTIGHVALLIEVCD............DELIMLHNTNSRGIII--.-.---.-ESLQRSSYFSKRYIVPVV
Q9FZU5_9VIRU/118-229 GR.VFEYG-------........--.KTDCGALVRDAFMLM-GLVFPDHPRGD..-MDEDAA..AGFWEKHLENCGFS--RVSDGLCAGDVVLTAT.---GGHASHAVLYL----............GNDWMLHHA--YNQLS--.-.---.-CRVPYTRYWADVTHSVWR
Q9RIE1_YERPE/136-252 GR.PYVFG-------........--.VFDCWMLCRDYLKREFNVELNPNPHLH.iPSWYTGD..TDILDQNYRNEGLVRLAPGTEPQRGDVFFIQY.---GKMPDHCAVYI----............GDGMILHHQ--IDRLS--.-.---.-CRAYYGGMYQKHTTHHLR
Q45906_COXBU/3-116 -R.PFIYS-------........--.VYDCYSLARDYYKKNFGIKLNDYDRPD..-FWWEKD..ANLYMENYKKEGFKE-IPAKELRCGDLILMKI.--NSPVPNHIAIYL----............GNGEILHHL--ELQPS--.-.---.-KREDYREKWRKKSVLFLR
Q9I5S7_PSEAE/119-250 GR.EFAHG-------........--.VLDCWSLCRDWYRREAGLELPDYPRRD..-GWWETG..ESLYEQHYAAAGFRP-VPLAGIRRGDMLVMQV.-GRALHPNHAGIYLGNDWrldsepvqalggDGPFLLHHL--YGRLS--.-.---.-TRDVFGGPWIERTRLVLR
Q9MCU3_BPHK0/116-231 ER.PFVLG-------........--.HFDCWGLVMSYFRQTHGIELHDYRVDY..-PWWENAypDNFYQDCWYECGFR--EFDGPPQEGDLVIMQV.--QADKWNHAGILL----............EGNMLLHHL--YGHLS--.-.---.-QRVPYGGYWQERTMKILR