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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00874 phylogeny
for nucleotide alignment


 
((((((((((((((((Q45398_BACST/365-457,((Q8Y5C7_LISMO/189-278,Q8CXW9_ECOL6/223-310),O07655_ECOLI/197-271)),Q815F4_BACCR/731-820),(LEVR_BACSU/844-932,(Q8Y8V7_LISMO/846-932,Q88ZS3_LACPL/321-410))),(Q82ZR7_ENTFA/848-937,((Q8ZL25_SALTY/845-932,Q82Z58_ENTFA/336-426),(Q8ZR51_SALTY/814-903,(Q8RD56_THETN/836-925,(Q8ZJY3_SALTY/826-911,Q833J4_ENTFA/824-914)))))),((Q88X48_LACPL/413-501,(Q8R5U5_THETN/810-901,Q88X48_LACPL/765-850)),(Q839Y1_ENTFA/855-947,Q88YZ6_LACPL/858-950))),Q97M18_CLOAB/804-893),(Q8Y8I4_LISMO/177-264,(Q8Y6G6_LISMO/798-887,Q836U6_ENTFA/806-895))),((LEVR_BACSU/481-569,((Q839Y1_ENTFA/489-580,Q88YZ6_LACPL/483-573),Q8Y8V7_LISMO/481-569)),(((Q8RCV3_THETN/200-288,Q8R5U5_THETN/453-538),((Q8Y6G6_LISMO/443-531,Q836U6_ENTFA/445-533),(Q815F4_BACCR/376-464,Q45398_BACST/8-96))),(Q8R5U8_THETN/491-585,Q97M18_CLOAB/444-532)))),(((Q928S7_LISIN/286-376,Q8Y8M4_LISMO/286-377),(((((Q8XP91_CLOPE/31-121,Q97JD1_CLOAB/187-277),Q97LJ1_CLOAB/181-271),((SACY_BACSU/180-273,(SACT_BACSU/178-271,P94467_BACST/181-274)),((((O33618_STACA/185-277,(Q8VRG9_STAEP/183-275,Q99UC2_STAAM/184-276)),(((Q9KEK7_BACHD/181-273,O06710_BACSU/184-276),Q8EQ40_OCEIH/183-275),Q819D4_BACCR/184-276)),((LACT_LACCA/182-277,(Q8DPP3_STRR6/182-276,Q8E4R9_STRA3/179-276)),((Q8RD56_THETN/473-563,(Q8G3W9_BIFLO/181-274,Q8GGK1_CORGL/187-280)),Q833J4_ENTFA/458-550))),(Q88YA0_LACPL/178-272,(Q834W3_ENTFA/179-273,(((((Q8DQU1_STRR6/180-274,(Q8P1Y7_STRP3/176-273,Q8E0E5_STRA5/176-273)),(Q88Y82_LACPL/180-276,Q8Y3R0_LISMO/179-272)),((Q48639_9LACT/179-257,Q9L8G7_CLOAB/181-275),(((Q46128_CLOLO/184-273,Q97J80_CLOAB/183-273),((Q831B3_ENTFA/181-274,Q8DUF3_STRMU/123-220),Q8Y4K2_LISMO/181-274)),((LICT_BACSU/180-273,(((BGLG_ECOLI/181-274,Q48407_KLEOX/1-91),ARBG_ERWCH/180-273),Q9KER8_BACHD/156-249)),Q9KG18_BACHD/180-273)))),(((Q8Y3P6_LISMO/181-274,Q88SB8_LACPL/180-276),Q9X566_ENTFC/180-273),Q88T56_LACPL/182-275)),(Q7N8X9_PHOLL/179-274,Q88SA5_LACPL/181-276))))))),(ATXA_BACAN/292-383,(Q9X672_STRMU/282-371,((Q88RZ5_LACPL/284-373,Q88S25_LACPL/280-371),Q82YX2_ENTFA/282-371)))),(((((Q88S94_LACPL/293-382,Q8NYB1_STAAW/299-389),((Q8Y9W7_LISMO/305-395,Q8Z139_SALTI/319-409),(Q8Y8I4_LISMO/290-379,Q8YA62_LISMO/284-374))),((Q8Y9U5_LISMO/320-406,Q8Y3Q0_LISMO/304-394),(Q81HK0_BACCR/309-398,(LICR_BACSU/306-396,Q8EMS7_OCEIH/315-405)))),(((Q8XA79_ECO57/246-336,Q8ZCR5_YERPE/266-356),O31644_BACSU/307-397),((Q8Y9A2_LISMO/298-387,Q8CXW9_ECOL6/337-428),(Q8CMV7_STAEP/284-374,Q99QZ8_STAAM/284-374)))),(((((((Q8DN39_STRR6/294-384,Q8E206_STRA5/297-386),(Q8NZC2_STRP8/291-381,(Q7X1P0_9LACT/218-308,Q82ZT1_ENTFA/281-371))),(Q8NYI2_STAAW/299-389,(Q88T49_LACPL/318-408,Q9KG92_BACHD/317-407))),((Q8Y5G4_LISMO/292-382,Q8RGT2_FUSNN/287-377),((((Q8EMT4_OCEIH/296-386,Q9KGB4_BACHD/297-387),Q8Y410_LISMO/298-388),Q8Y9M5_LISMO/298-388),Q8Y423_LISMO/304-394))),(Q8Y5C7_LISMO/300-390,(Q8DNA0_STRR6/319-409,((Q8DW03_STRMU/320-410,Q8P2S6_STRP8/319-409),Q8DXP9_STRA5/320-410)))),(Q899A8_CLOTE/262-352,((Q8EUZ8_MYCPE/315-405,Q8EVQ5_MYCPE/307-395),Q8EVW2_MYCPE/302-392))),(((Q8EL15_OCEIH/294-380,Q8RCV3_THETN/309-399),(Q8RC49_THETN/314-404,(O65990_CLOAB/314-404,Q8RCS2_THETN/313-403))),(((Q837K9_ENTFA/314-404,((Q8P0J0_STRP8/307-397,Q8DR86_STRR6/305-398),Q8DT02_STRMU/309-395)),(Q838N2_ENTFA/307-396,Q9CJH3_LACLA/288-375)),(((Q9K679_BACHD/318-405,(Q45419_BACST/321-409,Q8EN85_OCEIH/320-408)),P96574_BACSU/315-403),Q8NVE5_STAAW/314-402))))))),(((O33618_STACA/77-168,(Q8VRG9_STAEP/75-166,Q99UC2_STAAM/76-167)),(((Q8XP92_CLOPE/83-168,Q97JD1_CLOAB/82-170),Q97LJ1_CLOAB/76-164),((Q9KEK7_BACHD/76-164,((Q8EQ40_OCEIH/75-166,Q819D4_BACCR/79-167),O06710_BACSU/79-167)),(Q834W3_ENTFA/73-161,(SACY_BACSU/74-162,(SACT_BACSU/72-160,P94467_BACST/75-163)))))),((LACT_LACCA/76-163,(Q8DPP3_STRR6/76-163,Q8E4R9_STRA3/76-163)),((Q88T56_LACPL/76-164,Q88Y82_LACPL/75-163),(((Q831B3_ENTFA/75-163,(Q8P1Y7_STRP3/75-163,Q8DQU1_STRR6/75-163)),(((O07655_ECOLI/92-180,(Q8G3W9_BIFLO/75-163,Q88YA0_LACPL/71-159)),(Q8Y3P6_LISMO/76-164,Q88SA5_LACPL/74-163)),((Q7N8X9_PHOLL/73-161,Q9KER8_BACHD/51-139),(((LICT_BACSU/75-163,(Q88SB8_LACPL/74-159,((BGLG_ECOLI/77-164,Q8KP25_KLEAE/75-162),ARBG_ERWCH/75-163))),Q9KG18_BACHD/75-163),((Q9L8G7_CLOAB/76-164,(Q46128_CLOLO/76-164,Q97J80_CLOAB/75-163)),Q8Y4K2_LISMO/75-163))))),((Q8Y3R0_LISMO/74-162,Q9X566_ENTFC/74-162),(Q8DUF3_STRMU/21-109,Q48639_9LACT/72-162)))))))),(Q8RC49_THETN/207-295,((Q8EN85_OCEIH/210-298,(Q45419_BACST/211-299,(Q9K679_BACHD/208-296,P96574_BACSU/205-293))),(Q8YA62_LISMO/182-267,Q8Y9U5_LISMO/212-300)))),(((Q8XGH7_SALTI/22-108,Q837K8_ENTFA/21-107),Q8GGK1_CORGL/74-169),Q9KF98_BACHD/18-111)),((Q8RCS2_THETN/205-292,Q99SA2_STAAM/206-294),((Q82ZR7_ENTFA/475-563,ATXA_BACAN/179-264),((Q8DNA0_STRR6/206-298,Q8DW03_STRMU/207-299),(Q8P2S6_STRP8/202-298,Q8DXP9_STRA5/203-299))))),((Q9KG92_BACHD/206-294,(O65990_CLOAB/202-292,(Q8Y423_LISMO/203-286,Q899A8_CLOTE/149-237))),((((Q8Y9W7_LISMO/200-285,Q8Z139_SALTI/214-299),O31644_BACSU/197-285),(Q8Y3Q0_LISMO/201-288,(Q8DT02_STRMU/201-288,(Q8DR86_STRR6/201-287,Q8P0J0_STRP8/199-286)))),((LICR_BACSU/194-282,(Q8NYB1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