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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00867 alignment
(15 sequences with 120 aa)


YAGG_SCHPO/286-379 KILGIPASFSPIgVEAEAFASAISQNNLAYAVATQDTDVLLLGSSMISNF-.--LDLNDN---..............--FHLPLQIMDPRKIAQELNL---TFDGFQDYCLMCGTDFTSR
RAD2_SCHPO/147-238 ELMGIPFVNAPC.-EAEAQCAALARSGKVYAAASEDMDTLCFQAPVLLRH-.--LTFSEQR--..............---KEPISEYNIEKALNGLDM---SVEQFVDLCILLGCDYCEP
RAD27_YEAST/144-235 GLMGIPYIIAPT.-EAEAQCAELAKKGKVYAAASEDMDTLCYRTPFLLRH-.--LTFSEAK--..............---KEPIHEIDTELVLRGLDL---TIEQFVDLCIMLGCDYCES
FEN1_HUMAN/146-237 SLMGIPYLDAPS.-EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRH-.--LTASEAK--..............---KLPIQEFHLSRILQELGL---NQEQFVDLCILLGSDYCES
FEN_METJA/140-228 SLMGIPYVEAPS.-EGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRN-.--LTTT-----..............---KEMPELIELNEVLEDLRI---SLDDLIDIAIFMGTDYNPG
FEN_METTH/140-230 ELLGIPYVQAPG.-EGEAQASYMVKMGDAWAVASQDYDCLLFGAPRVVRN-.--LTLSGK---..............---LEDPEIIELESTLRELSI---SHTQLVDMALLVGTDFNEG
FEN_ARCFU/139-239 SYMGIPFVDAPS.-EGEAQAAYMAAKGDVEYTGSQDYDSLLFGSPRLARN-.--LAITGKRKLpg..........knVYVDVKPEIIILESNLKRLGL---TREQLIDIAILVGTDYNEG
RAD2_YEAST/780-868 SRFGIPYITAPM.-EAEAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKN-.--MFHEKN---..............---YVEFYDAE--SILKLLGL---DRKNMIELAQLLGSDYTNG
RAD13_SCHPO/765-853 RLFGLPYIVAPQ.-EAEAQCSKLLELKLVDGIVTDDSDVFLFGGTRVYRN-.--MFNQNK---..............---FVELYLMD--DMKREFNV---NQMDLIKLAHLLGSDYTMG
XPG_MOUSE/776-864 RLFGVPYIQAPM.-EAEAQCAMLDLSDQTSGTITDDSDIWLFGARHVYKN-.--FFNKNK---..............---FVEYYQYV--DFYSQLGL---DRNKLINLAYLLGSDYTEG
YEN1_YEAST/181-292 DLMNISYVIACG.-EGEAQCVWLQVSGAVDFILSNDSDTLVFGGEKILKNYsKFYDDFGPSSItshspsrhhdskesFVTVIDLPKIN--KVAG----KKFDRLSLLFFSVLLGADYNRG
Q24557_DROME/138-230 RSRNVDCIVAPY.-EADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFK-.--LDLNGSG--..............--LLVEAEKLHLAMGCTEEKY---HFDKFRRMCILSGCDYLDS
EXO1_YEAST/138-231 KLNGIRYIVAPF.-EADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITK-.--LNDYGE---..............---CLEICRDNFIKLPKKFPLGSLTNEEIITMVCLSGCDYTNG
DIN7_YEAST/138-231 KLHSIPYIVAPF.-EADPQMVYLEKMGLIQGIISEDSDLLVFGCKTLITK-.--LNDQGK---..............---ALEISKDDFSALPENFPLGELSEQQFRNLVCLAGCDYTSG
EXO1_SCHPO/138-229 REHGIESIVAPY.-EADAQLVYLEKENIIDGIITEDSDMLVFGAQTVLFK-.--MDGFGN---..............---CITIRRND-IANAQDLNL-RLPIEKLRHMAIFSGCDYTDG