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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00861 alignment
(34 sequences with 150 aa)


RL5_CAEEL/26-172 GKTDYYARKRLTVQDKNKYNTP.KYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPR.YGLKVGLTNYAAAYATGLLLARRHLKTIGLDsTYKGHEELTGEDYNVEE.EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINV
RL5_DUNSA/26-173 GKTDYRARLRLVRQDKNKYNTH.KYRLVVRFSNKNVTCQIVYSTIQGDVVMAAAYSKELPN.YGLKVGLTNYSAAYCVGLLVARRILTKLNLAdTYKGQEEPDGEDYNVEPvEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDI
RL5A_ORYSA/27-170 GKTDYRARIRLTNQDKNKYNTP.KYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPR.YGLEVGLTNYAAAYCTGLLLARRVLKLRGLDqEYEGNIEATGEDYYVEP.ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI
RL5_STYCL/25-172 GKTDYFARKRLVVQDKNKYNTP.KYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPR.YGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDeIYEGQTEIDGDEFYVEDvDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDI
RL5A_XENLA/25-172 GKTDYYARKRLVIQDKNKYNTP.KYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK.YGIKVGLTNYAAAYCTGLLLARRLLNKFGLDkVYEGQVEVTGDEYNVESiDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSI
RL5_YEAST/26-173 GKTDYYQRKRLVTQHKAKYNTP.KYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPR.YGITHGLTNWAAAYATGLLIARRTLQRLGLDeTYKGVEEVEGEYELTEAvEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYV
RL5A_SCHPO/26-173 GKTDYYARKRLIAQAKNKYNAP.KYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPR.YGIKWGLANWTAAYATGLLVARRALAKVGLAdKYEGVTEPEGEFELTEAiEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFI
RL18_HALMA/9-129 PMRRRREARTDYHQRLRLLKSG.KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAE.YGWEAPTGNMPSAYLTGLLAGLRAQE-----.--AG---------VEE-.--------AVLDIGLNSPTPGSKVFAIQEGAIDAGLDI
RL18_METVA/12-132 PFRRRREGKTDFRQRLGLLLSG.KPRLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVK.MGYKGHCGNLPAAYLTGLLLGKKAVE-----.--EG---------LEE-.--------AILDKGLHRATKGAAIFAVLKGALDAGMDI
RL18_METJA/10-130 KFRRRREAKTDYRKRLKLLLSR.KPRLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIK.LGYKGHTGNLPSAYLTGYLLGKKALA-----.--KG---------YTE-.--------AVLDIGLHRATKGNAIFAILKGALDAGMEI
RL18_ARCFU/12-132 PLRRRREGKTNYRKRLKLLLSR.KPRLVVRITNRRVIAQIVEYAPEGDRVVVGVDSAMLRE.FGWKGDLNNTPAAYLTGILIAKKALQ-----.--KG---------IGE-.--------AVLDIGLHTPTRGSRVFAVLRGAVEGGLEV
RL18_METTH/10-130 AFRRRREGKTDYRARYKMVETG.KSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQK.MGWLGGTSNTAAAYLTGYLCGKRALK-----.--EG---------IEE-.--------AVLDIGLRPAIRGSKVFAALKGAVDAGLNV
RL18_SULAC/10-131 KFRRRREGKTDYYTRYTYVINN.AIRFVPRLTNKYVIVSVSKFDQKGDIMIAYAHSIELVKkYGWKGDTNNTPAAYLTGYLAGLRAVK-----.--SGVK-----------.-------AAVSDIGLFVPVKGGRIFAVIKGAIDAGLKV
RL18_VIBPR/1-117 MDKKASRIRRATRARRKIAELG.ATRLVVHRTPRHVYAQVIASNGSEVIAAASTVEKAIRE.QV-KNTGNVDA-AKAVGKAIAERALE-----.--KGV------------.--------ETVAFDRSGFQYHGRVAALAESAREAGLKF
RL18_HAEIN/1-117 MDKKSARIRRAARARHMMREQG.VTRLVIHRTPRHIYAQVIAPNGSEVLAAASTVEKAIRE.QV-KYTGNKDA-AAAVGKAVAERALA-----.--KGV------------.--------QAVAFDRSGFKYHGRVQTLADAAREAGLQF
RL18_BUCAK/1-117 MDKKSARIRRATRARRKLKELG.ATRLVVHRSPRHMYAQVIAPNGSEVLVAASTLEKAITE.QL-KYSGNKDA-AAAVGKALAERALE-----.--KGI------------.--------AKVSFARSGFQYHGRVQALADAAREAGLQF
RK18_ODOSI/19-135 KPNKYKQLKRESLRGLIKGTPE.RPRLSVFRSNENIYAQIIDDTNSKTLVSCSTLDRDIKL.N--IQNGRTCDASKLIGQKLAKLSLK-----.--KNI------------.--------TKIVFDRGPYLYHGRIKALADGAREGGLQF
RL18_MICLU/5-119 GKFNARTRRHLRVRKRISGTTS.VPRLVVNRSARHMFVQVVDDTQSRTIAYASTMEADVRA.----LEGDKTAKAKRVGELVAERAKA-----.--AGI------------.--------EAAVFDRAGNKYHGRVAAVADGAREGGLQL
RL18_MYCTU/8-122 TRRISRLRRHTRLRKKLSGTAE.RPRLVVHRSARHIHVQLVNDLNGTTVAAASSIEADVRG.----VPGDKKARSVRVGQLIAERAKA-----.--AGI------------.--------DTVVFDRGGYTYGGRIAALADAARENGLSF
RL18_STRCO/13-127 YKRAAIKRRHIRIRKNLSGTAE.RPRLVVTRSNRHIVAQVIDDIKGHTLASASTLDTSIR-.-GGEAD--KSAQAKQVGALVAERAKA-----.--AGV------------.--------EAVVFDRGGNQYAGRIAALADAAREAGLKF
RK18_PORPU/4-120 NSKQTRIHKHRRVRKKVQGTAS.RPRLCVFRSNKHIYAQVIDDIKGITLVAASSINLKLQS.SITLGS--NCEASRSVGKTLAERSIK-----.--EGI------------.--------ENVVFDRGGKLYHGRVEALAEAAKEAGMVF
RL18_BACSU/6-120 SKNAARLKRHARVRAKLSGTAE.RPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLN-.-VESTG--DTSAATKVGELVAKRAAE-----.--KGI------------.--------SDVVFDRGGYLYHGRVKALADAAREAGLKF
RL18_BACST/6-120 DRNAVRKKRHARIRKKIFGTTE.RPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFG-.-LDSTN--NIEAAKKVGELVAKRALE-----.--KGI------------.--------KQVVFDRGGYLYHGRVKALADAAREAGLEF
RL18_SYNP6/4-120 SRRESTRRRHRRVRRTIVGTPA.RPRLSVFRSNNHIYAQVIDDAAGHTLAAASSLDPDLRQ.S--LTSGGNQQASAAVGKLIAERAQA-----.--KGV------------.--------TTVVFDRGGNLYHGRVKALAEAAREAGLEF
RL18_SYNY3/4-120 TRKSATQRRHRRLRRHLSGTSE.RPRLAVFRSNDHIYAQVIDDVAQHTLAAASTLDPDLKK.S--LSSTATQEASAEVGKLVAQRAIA-----.--KGI------------.--------NQVVFDRGGKLYHGRVKALAEAAREAGLNF
RK18_CYAPA/4-121 TRKQATQRRHRRVRRKVFGTSE.RPRLAVFRSHQHIYAQIIDDTQHRTLAASSTLEPSVKN.SE-LSSTSTCAASAIVGQLIAKKALE-----.--KGI------------.--------TQVVFDRGGKIYHGRVRTLAEAAREAGLQF
RL18_MYCCA/4-116 TKTEARKRRHFRVRHKVVGTAE.RPRLNVFKSNTNFYAQIIDDTKGVTLVSASTLKMDLK-.---SKS--NIQAAEKVAEELTKKALA-----.--ANI------------.--------NQVVFDRNGYLYHGKIKAFAQKARENGLKF
RL18_AQUAE/6-124 TRREKRLRRHKRIRKKVFGTPE.RPRLCVYRSLKHFYAQIIDDTIGHTLVSASTLDPEFEK.ITGKRGGKSIKDAEVVAEIIARRALE-----.--KGI------------.--------KKVVFDRGGFKYHGKIKAFADKCREMGLEF
RL18_CHLTR/7-123 KKTSGKARRALRVRKALKGCSL.KPRLSVVKTNKHVYVQLIDDVEGKTLASISTLAKVAKT.SGLTRK--NQDNAKALGIKIAELGKG-----.--LQV------------.--------DRVVFDRGAHKYHGVVAMVADGAREGGLQF
RL18_HELPY/9-119 KKKALRDRRKLRIKSKLLGDAL.RPRVSVFRSNRYFYAQAIDDVKQSTITHID-----GRK.MGFKNT---QEDAKKLGALFAEELKK-----.--AGI------------.--------ERAVYDRNGYLYHGVVAAFAESLRENGIAL
RL18_BORBU/7-119 AEQRKLRRKKRIKDKIGRGVAS.RPRITVFKSNRYFYAQVIDDSKGHTIASISTI---EKS.LNLGKN---IDDVKKLGEVLAKRLKE-----.--KNI------------.--------NNLIFDRNGYKYHGLIASFATSLREFGINI
RL18_MYCPN/5-116 TEQRRLRHKRIVKKIRATNHDN.RVVLMVIKSLNHISVQAWDFSQNIVLASSSSLALKLK-.----NG--NKDNAKLVGQDIADKLVK-----.--LKL------------.--------TNVVFDTGGSKYHGRIAALAEAARERGLNF
RL18_MYCGE/4-115 NDKRRIRHKRIVKKIRLTNLNN.RVVLIVIKSLKNISVQAWDFSKNVVLTSSSSLQLKLK-.----NG--NKENAKLVGMDIATKLIK-----.--LNQ------------.--------KDVVFDTGGSKYHGRIAALAEGARAKGLNF
RL18_MYCGA/8-119 -RNERRQMRHKRVIKKIRRIDNdRPVMIVVKSNSHISAQVWDFNQNKIIASSSSVSLDLV-.----NG--NKENAAVVGTDIANKLLK-----.--MKI------------.--------DEITFDHGGSKYHGRIAALADAARKAGLKF