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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00860 phylogeny
for amino acid alignment


 
(YBBY_ECOLI/8-396,(((((YJCD_HAEIN/18-399,YJCD_ECOLI/26-410),O34978_BACSU/12-396),((URAA_HAEIN/16-385,(URAA_ECOLI/15-385,(PYRP_BACSU/17-395,PYRP_BACCL/15-390))),YCDG_ECOLI/30-404)),((YICE_ECOLI/33-428,YGFO_ECOLI/41-435),(YGFU_ECOLI/28-412,((PBUX_BACSU/6-386,PUCK_BACSU/8-388),PUCJ_BACSU/6-391)))),(Q60850_MOUSE/80-476,(Q18771_CAEEL/30-454,((O18063_CAEEL/22-377,O18061_CAEEL/19-439),O18057_CAEEL/15-435)))),YWDJ_BACSU/1-392);
(YBBY_ECOLI/8-396:1.16645,(((((YJCD_HAEIN/18-399:0.12141,YJCD_ECOLI/26-410:0.13012):0.66548,O34978_BACSU/12-396:0.54494):1.69769,((URAA_HAEIN/16-385:0.67548,(URAA_ECOLI/15-385:0.54815,(PYRP_BACSU/17-395:0.29510,PYRP_BACCL/15-390:0.17947):0.20031):0.27265):0.12667,YCDG_ECOLI/30-404:0.56916):0.48022):0.06763,((YICE_ECOLI/33-428:0.41243,YGFO_ECOLI/41-435:0.57370):0.47906,(YGFU_ECOLI/28-412:0.53531,((PBUX_BACSU/6-386:0.23822,PUCK_BACSU/8-388:0.22305):0.15171,PUCJ_BACSU/6-391:0.26080):0.25448):0.26528):0.16843):0.36953,(Q60850_MOUSE/80-476:1.62929,(Q18771_CAEEL/30-454:0.51102,((O18063_CAEEL/22-377:0.06039,O18061_CAEEL/19-439:0.04429):0.20758,O18057_CAEEL/15-435:0.21436):0.41358):0.38827):0.48221):0.66671,YWDJ_BACSU/1-392:0.96527);